{"id":"https://openalex.org/W2092170757","doi":"https://doi.org/10.1093/nar/gks1058","title":"APPRIS: annotation of principal and alternative splice isoforms","display_name":"APPRIS: annotation of principal and alternative splice isoforms","publication_year":2012,"publication_date":"2012-11-17","ids":{"openalex":"https://openalex.org/W2092170757","doi":"https://doi.org/10.1093/nar/gks1058","mag":"2092170757","pmid":"https://pubmed.ncbi.nlm.nih.gov/23161672"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1058","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1058","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D110/18785919/gks1058.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/41/D1/D110/18785919/gks1058.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100687164","display_name":"Jos\u00e9 Manuel Rodr\u0131\u0301guez","orcid":"https://orcid.org/0000-0002-9948-5073"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Jose Manuel Rodriguez","raw_affiliation_strings":["Spanish National Bioinformatics Institute (INB), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"Spanish National Bioinformatics Institute (INB), Madrid 28029, Spain","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039483810","display_name":"Paolo Maietta","orcid":"https://orcid.org/0000-0002-9446-8063"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Paolo Maietta","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008691880","display_name":"Iakes Ezkurdia","orcid":"https://orcid.org/0000-0001-9074-5302"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Iakes Ezkurdia","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065981830","display_name":"Alessandro Pietrelli","orcid":"https://orcid.org/0000-0003-0241-8542"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alessandro Pietrelli","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015243475","display_name":"Jan\u2010Jaap Wesselink","orcid":null},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Jan-Jaap Wesselink","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063847276","display_name":"Gonzalo L\u00f3pez","orcid":"https://orcid.org/0000-0002-5092-1284"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Gonzalo Lopez","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015217651","display_name":"Alfonso Valencia","orcid":"https://orcid.org/0000-0002-8937-6789"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Alfonso Valencia","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5088945131","display_name":"Michael L. Tress","orcid":"https://orcid.org/0000-0001-9046-6370"},"institutions":[{"id":"https://openalex.org/I4210089594","display_name":"Spanish National Cancer Research Centre","ror":"https://ror.org/00bvhmc43","country_code":"ES","type":"facility","lineage":["https://openalex.org/I4210089594"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"Michael L. Tress","raw_affiliation_strings":["#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain"],"affiliations":[{"raw_affiliation_string":"#N#1Spanish National Bioinformatics Institute (INB) and 2Structural Biology and Biocomputing Programme, Spanish National Cancer Research Centre (CNIO), Madrid 28029, Spain","institution_ids":["https://openalex.org/I4210089594"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5100687164"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":5.2352,"has_fulltext":false,"cited_by_count":271,"citation_normalized_percentile":{"value":0.96550451,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"41","issue":"D1","first_page":"D110","last_page":"D117"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/gene-isoform","display_name":"Gene isoform","score":0.5964159369468689},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5827723145484924},{"id":"https://openalex.org/keywords/splice","display_name":"splice","score":0.5751593112945557},{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.5636284947395325},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.5433858036994934},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.4562701880931854},{"id":"https://openalex.org/keywords/principal","display_name":"Principal (computer security)","score":0.43796294927597046},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.42688706517219543},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.3873324692249298},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3609108626842499},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.29056984186172485},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.2633834183216095},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.19503337144851685},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.18753355741500854}],"concepts":[{"id":"https://openalex.org/C53345823","wikidata":"https://www.wikidata.org/wiki/Q5531554","display_name":"Gene isoform","level":3,"score":0.5964159369468689},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5827723145484924},{"id":"https://openalex.org/C2780989783","wikidata":"https://www.wikidata.org/wiki/Q7578557","display_name":"splice","level":3,"score":0.5751593112945557},{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.5636284947395325},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.5433858036994934},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.4562701880931854},{"id":"https://openalex.org/C144559511","wikidata":"https://www.wikidata.org/wiki/Q2986279","display_name":"Principal (computer security)","level":2,"score":0.43796294927597046},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.42688706517219543},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.3873324692249298},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3609108626842499},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29056984186172485},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.2633834183216095},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.19503337144851685},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.18753355741500854},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gks1058","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1058","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D110/18785919/gks1058.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23161672","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23161672","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:2536446","is_oa":false,"landing_page_url":"http://europepmc.org/articles/PMC3531113","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3531113","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531113","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1058","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1058","pdf_url":"https://academic.oup.com/nar/article-pdf/41/D1/D110/18785919/gks1058.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.75,"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15"}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2092170757.pdf","grobid_xml":"https://content.openalex.org/works/W2092170757.grobid-xml"},"referenced_works_count":62,"referenced_works":["https://openalex.org/W1590240800","https://openalex.org/W1646393397","https://openalex.org/W1767772592","https://openalex.org/W1971147414","https://openalex.org/W1971363517","https://openalex.org/W1981575795","https://openalex.org/W1989500357","https://openalex.org/W1989581249","https://openalex.org/W1990570801","https://openalex.org/W1997509288","https://openalex.org/W2000588380","https://openalex.org/W2005153622","https://openalex.org/W2011920499","https://openalex.org/W2012649419","https://openalex.org/W2019126169","https://openalex.org/W2029833898","https://openalex.org/W2031121711","https://openalex.org/W2041583688","https://openalex.org/W2048618925","https://openalex.org/W2051210555","https://openalex.org/W2051353391","https://openalex.org/W2083853503","https://openalex.org/W2089047063","https://openalex.org/W2096465161","https://openalex.org/W2096721473","https://openalex.org/W2100117604","https://openalex.org/W2101139097","https://openalex.org/W2101466114","https://openalex.org/W2101735289","https://openalex.org/W2102304447","https://openalex.org/W2112132489","https://openalex.org/W2112954412","https://openalex.org/W2115336138","https://openalex.org/W2116398954","https://openalex.org/W2119326915","https://openalex.org/W2120599553","https://openalex.org/W2123724865","https://openalex.org/W2125537622","https://openalex.org/W2125946663","https://openalex.org/W2126048802","https://openalex.org/W2132926880","https://openalex.org/W2136570207","https://openalex.org/W2141831115","https://openalex.org/W2141885858","https://openalex.org/W2142314840","https://openalex.org/W2149197693","https://openalex.org/W2151139168","https://openalex.org/W2152200681","https://openalex.org/W2152748513","https://openalex.org/W2155804510","https://openalex.org/W2156052197","https://openalex.org/W2157223471","https://openalex.org/W2158714788","https://openalex.org/W2161811833","https://openalex.org/W2167827709","https://openalex.org/W2168377826","https://openalex.org/W2170441710","https://openalex.org/W2259938310","https://openalex.org/W2519244818","https://openalex.org/W4210347168","https://openalex.org/W4233334497","https://openalex.org/W4320301318"],"related_works":["https://openalex.org/W3111061871","https://openalex.org/W2001319824","https://openalex.org/W2067501355","https://openalex.org/W1967118134","https://openalex.org/W2008389025","https://openalex.org/W2904939684","https://openalex.org/W2136950317","https://openalex.org/W2081598294","https://openalex.org/W2012312817","https://openalex.org/W2090969926"],"abstract_inverted_index":{"Here,":[0],"we":[1],"present":[2],"APPRIS":[3,14,49,83,110,131],"(http://appris.bioinfo.cnio.es),":[4],"a":[5,86,112],"database":[6],"that":[7,134],"houses":[8],"annotations":[9,23,46,101],"of":[10,24,44,77,80,102,117,129,138],"human":[11,26],"splice":[12],"isoforms.":[13],"has":[15],"been":[16],"designed":[17],"to":[18,21,58,70,151],"provide":[19],"value":[20],"manual":[22],"the":[25,45,78,95,100,118,122,130,139,152],"genome":[27],"by":[28,48,65],"adding":[29],"reliable":[30,75],"protein":[31],"structural":[32,148],"and":[33,36,55,73,105],"functional":[34,61,146],"data":[35,132],"information":[37,149],"from":[38],"cross-species":[39],"conservation.":[40],"The":[41],"visual":[42],"representation":[43],"provided":[47],"for":[50,90,107,115,126],"each":[51,91,108],"gene":[52],"allows":[53],"annotators":[54],"researchers":[56],"alike":[57],"easily":[59],"identify":[60],"changes":[62],"brought":[63],"about":[64],"splicing":[66,81],"events.":[67],"In":[68],"addition":[69],"collecting,":[71],"integrating":[72],"analyzing":[74],"predictions":[76],"effect":[79],"events,":[82],"also":[84],"selects":[85],"single":[87],"reference":[88],"sequence":[89],"gene,":[92],"here":[93],"termed":[94],"principal":[96,113,153],"isoform,":[97],"based":[98],"on":[99],"structure,":[103],"function":[104],"conservation":[106],"transcript.":[109],"identifies":[111],"isoform":[114],"85%":[116],"protein-coding":[119],"genes":[120],"in":[121],"GENCODE":[123],"7":[124],"release":[125],"ENSEMBL.":[127],"Analysis":[128],"shows":[133],"at":[135],"least":[136],"70%":[137],"alternative":[140],"(non-principal)":[141],"variants":[142],"would":[143],"lose":[144],"important":[145],"or":[147],"relative":[150],"isoform.":[154]},"counts_by_year":[{"year":2026,"cited_by_count":4},{"year":2025,"cited_by_count":19},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":28},{"year":2020,"cited_by_count":39},{"year":2019,"cited_by_count":24},{"year":2018,"cited_by_count":19},{"year":2017,"cited_by_count":13},{"year":2016,"cited_by_count":14},{"year":2015,"cited_by_count":20},{"year":2014,"cited_by_count":12},{"year":2013,"cited_by_count":7}],"updated_date":"2026-03-27T14:29:43.386196","created_date":"2025-10-10T00:00:00"}
