{"id":"https://openalex.org/W1974565082","doi":"https://doi.org/10.1093/nar/gks1042","title":"Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system","display_name":"Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system","publication_year":2012,"publication_date":"2012-11-27","ids":{"openalex":"https://openalex.org/W1974565082","doi":"https://doi.org/10.1093/nar/gks1042","mag":"1974565082","pmid":"https://pubmed.ncbi.nlm.nih.gov/23193282"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gks1042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1042","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gks1042","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5050852049","display_name":"Susan M. Sunkin","orcid":"https://orcid.org/0000-0001-9893-3834"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Susan M. Sunkin","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA. susans@alleninstitute.org","Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA. susans@alleninstitute.org","institution_ids":["https://openalex.org/I4210140341"]},{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074982934","display_name":"Lydia Ng","orcid":"https://orcid.org/0000-0002-7499-3514"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lydia Ng","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103699217","display_name":"Chris Lau","orcid":null},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chris Lau","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5057764524","display_name":"Tim Dolbeare","orcid":"https://orcid.org/0000-0002-5147-1713"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Tim Dolbeare","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025604239","display_name":"Terri L. Gilbert","orcid":"https://orcid.org/0000-0002-4986-6898"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Terri L. Gilbert","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033699028","display_name":"Carol L. Thompson","orcid":"https://orcid.org/0000-0003-1528-3237"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carol L. Thompson","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090586758","display_name":"Michael Hawrylycz","orcid":"https://orcid.org/0000-0002-5741-8024"},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Michael Hawrylycz","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5110029158","display_name":"Chinh Dang","orcid":null},"institutions":[{"id":"https://openalex.org/I1314596251","display_name":"Allen Institute for Brain Science","ror":"https://ror.org/00dcv1019","country_code":"US","type":"facility","lineage":["https://openalex.org/I1314596251","https://openalex.org/I4210140341"]},{"id":"https://openalex.org/I4210140341","display_name":"Allen Institute","ror":"https://ror.org/03cpe7c52","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210140341"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chinh Dang","raw_affiliation_strings":["Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Allen Institute for Brain Science, 551 North 34th Street, Seattle, WA 98103, USA","institution_ids":["https://openalex.org/I4210140341","https://openalex.org/I1314596251"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.7396,"has_fulltext":false,"cited_by_count":862,"citation_normalized_percentile":{"value":0.98573919,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"41","issue":"D1","first_page":"D996","last_page":"D1008"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11289","display_name":"Single-cell and spatial transcriptomics","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9769999980926514,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/atlas","display_name":"Atlas (anatomy)","score":0.8225356340408325},{"id":"https://openalex.org/keywords/brain-atlas","display_name":"Brain atlas","score":0.8155174255371094},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.575900137424469},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.46247780323028564},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4592426121234894},{"id":"https://openalex.org/keywords/human-protein-atlas","display_name":"Human Protein Atlas","score":0.44956326484680176},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.44349968433380127},{"id":"https://openalex.org/keywords/neuroinformatics","display_name":"Neuroinformatics","score":0.4396766424179077},{"id":"https://openalex.org/keywords/data-set","display_name":"Data set","score":0.4236932098865509},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.4018370509147644},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.39851799607276917},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.30630895495414734},{"id":"https://openalex.org/keywords/neuroscience","display_name":"Neuroscience","score":0.2395506501197815},{"id":"https://openalex.org/keywords/anatomy","display_name":"Anatomy","score":0.21456554532051086},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.20192387700080872},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.09417977929115295}],"concepts":[{"id":"https://openalex.org/C2776673561","wikidata":"https://www.wikidata.org/wiki/Q655357","display_name":"Atlas (anatomy)","level":2,"score":0.8225356340408325},{"id":"https://openalex.org/C2780972224","wikidata":"https://www.wikidata.org/wiki/Q17047956","display_name":"Brain atlas","level":2,"score":0.8155174255371094},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.575900137424469},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.46247780323028564},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4592426121234894},{"id":"https://openalex.org/C158163496","wikidata":"https://www.wikidata.org/wiki/Q5937310","display_name":"Human Protein Atlas","level":4,"score":0.44956326484680176},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.44349968433380127},{"id":"https://openalex.org/C205427263","wikidata":"https://www.wikidata.org/wiki/Q1931480","display_name":"Neuroinformatics","level":2,"score":0.4396766424179077},{"id":"https://openalex.org/C58489278","wikidata":"https://www.wikidata.org/wiki/Q1172284","display_name":"Data set","level":2,"score":0.4236932098865509},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.4018370509147644},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.39851799607276917},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.30630895495414734},{"id":"https://openalex.org/C169760540","wikidata":"https://www.wikidata.org/wiki/Q207011","display_name":"Neuroscience","level":1,"score":0.2395506501197815},{"id":"https://openalex.org/C105702510","wikidata":"https://www.wikidata.org/wiki/Q514","display_name":"Anatomy","level":1,"score":0.21456554532051086},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.20192387700080872},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.09417977929115295},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C6856738","wikidata":"https://www.wikidata.org/wiki/Q331672","display_name":"Protein expression","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000328","descriptor_name":"Adult","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000716","descriptor_name":"Anatomy, Artistic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000716","descriptor_name":"Anatomy, Artistic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000716","descriptor_name":"Anatomy, Artistic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000033","qualifier_name":"anatomy & histology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D001921","descriptor_name":"Brain","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011323","descriptor_name":"Primates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011323","descriptor_name":"Primates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011323","descriptor_name":"Primates","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017403","descriptor_name":"In Situ Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017403","descriptor_name":"In Situ Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017403","descriptor_name":"In Situ Hybridization","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gks1042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1042","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:23193282","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/23193282","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.786.4300","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.786.4300","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/29/db/gks1042.PMC3531093.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2590228","is_oa":false,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3531093","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gks1042","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gks1042","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.47999998927116394,"display_name":"Industry, innovation and infrastructure","id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G2063375800","display_name":null,"funder_award_id":"271-2008-0047","funder_id":"https://openalex.org/F4320332505","funder_display_name":"U.S. Public Health Service"},{"id":"https://openalex.org/G3757107260","display_name":null,"funder_award_id":"RC2MH089929","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G4480743987","display_name":null,"funder_award_id":"R01 HL59658","funder_id":"https://openalex.org/F4320337338","funder_display_name":"National Heart, Lung, and Blood Institute"},{"id":"https://openalex.org/G539135788","display_name":null,"funder_award_id":"RC2MH090047","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"},{"id":"https://openalex.org/G7326351672","display_name":null,"funder_award_id":"RC2MH089921","funder_id":"https://openalex.org/F4320337346","funder_display_name":"National Institute of Mental Health"}],"funders":[{"id":"https://openalex.org/F4320332505","display_name":"U.S. Public Health Service","ror":"https://ror.org/05xf94514"},{"id":"https://openalex.org/F4320337338","display_name":"National Heart, Lung, and Blood Institute","ror":"https://ror.org/012pb6c26"},{"id":"https://openalex.org/F4320337346","display_name":"National Institute of Mental Health","ror":"https://ror.org/04xeg9z08"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1973975463","https://openalex.org/W1978204300","https://openalex.org/W2003572485","https://openalex.org/W2006896953","https://openalex.org/W2020022521","https://openalex.org/W2037582484","https://openalex.org/W2055655674","https://openalex.org/W2066132450","https://openalex.org/W2104135721","https://openalex.org/W2107580398","https://openalex.org/W2109766770","https://openalex.org/W2123491442","https://openalex.org/W2131801573","https://openalex.org/W2151464048","https://openalex.org/W2168909179","https://openalex.org/W2172242398","https://openalex.org/W4210347168","https://openalex.org/W6644671336"],"related_works":["https://openalex.org/W3214912135","https://openalex.org/W4387252449","https://openalex.org/W2012519212","https://openalex.org/W4249039539","https://openalex.org/W1523541591","https://openalex.org/W2592984741","https://openalex.org/W2582837249","https://openalex.org/W1967068856","https://openalex.org/W1592689442","https://openalex.org/W2055554484"],"abstract_inverted_index":{"The":[0],"Allen":[1,47,152,161,170],"Brain":[2,48,124,153,162,171],"Atlas":[3,154,163,172],"(http://www.brain-map.org)":[4],"provides":[5],"a":[6],"unique":[7,80],"online":[8],"public":[9],"resource":[10],"integrating":[11],"extensive":[12],"gene":[13,107,133],"expression":[14],"data,":[15,123],"connectivity":[16],"data":[17,54,97,144,155,173],"and":[18,24,30,36,53,62,72,79,93,103,110,120,132,135],"neuroanatomical":[19],"information":[20],"with":[21],"powerful":[22],"search":[23,92],"viewing":[25],"tools":[26],"for":[27,106,127],"the":[28,42,46,83,95,160,169],"adult":[29],"developing":[31],"brain":[32],"in":[33,58,82],"mouse,":[34],"human":[35],"non-human":[37],"primate.":[38],"Here,":[39],"we":[40],"review":[41],"resources":[43,164],"available":[44],"at":[45],"Atlas,":[49],"describing":[50],"each":[51],"product":[52],"type":[55],"[such":[56],"as":[57],"situ":[59],"hybridization":[60],"(ISH)":[61],"supporting":[63],"histology,":[64],"microarray,":[65],"RNA":[66,121],"sequencing,":[67],"reference":[68,138],"atlases,":[69],"projection":[70],"mapping":[71],"magnetic":[73],"resonance":[74],"imaging].":[75],"In":[76,141],"addition,":[77,142],"standardized":[78],"features":[81],"web":[84],"applications":[85],"are":[86],"described":[87],"that":[88],"enable":[89,147],"users":[90,148],"to":[91,149],"mine":[94],"various":[96],"sets.":[98],"Features":[99],"include":[100],"both":[101],"simple":[102],"sophisticated":[104],"methods":[105],"searches,":[108],"colorimetric":[109],"fluorescent":[111],"ISH":[112],"image":[113],"viewers,":[114],"graphical":[115],"displays":[116],"of":[117,130,159],"ISH,":[118],"microarray":[119],"sequencing":[122],"Explorer":[125],"software":[126],"3D":[128],"navigation":[129],"anatomy":[131],"expression,":[134],"an":[136],"interactive":[137],"atlas":[139],"viewer.":[140],"cross":[143],"set":[145],"searches":[146],"query":[150],"multiple":[151],"sets":[156],"simultaneously.":[157],"All":[158],"can":[165],"be":[166],"accessed":[167],"through":[168],"portal.":[174]},"counts_by_year":[{"year":2026,"cited_by_count":51},{"year":2025,"cited_by_count":103},{"year":2024,"cited_by_count":104},{"year":2023,"cited_by_count":86},{"year":2022,"cited_by_count":93},{"year":2021,"cited_by_count":91},{"year":2020,"cited_by_count":78},{"year":2019,"cited_by_count":64},{"year":2018,"cited_by_count":49},{"year":2017,"cited_by_count":41},{"year":2016,"cited_by_count":36},{"year":2015,"cited_by_count":29},{"year":2014,"cited_by_count":19},{"year":2013,"cited_by_count":18}],"updated_date":"2026-07-05T07:55:05.734416","created_date":"2025-10-10T00:00:00"}
