{"id":"https://openalex.org/W2057589481","doi":"https://doi.org/10.1093/nar/gkr921","title":"modMine: flexible access to modENCODE data","display_name":"modMine: flexible access to modENCODE data","publication_year":2011,"publication_date":"2011-11-12","ids":{"openalex":"https://openalex.org/W2057589481","doi":"https://doi.org/10.1093/nar/gkr921","mag":"2057589481","pmid":"https://pubmed.ncbi.nlm.nih.gov/22080565"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr921","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr921","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1082/16957109/gkr921.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1082/16957109/gkr921.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022967864","display_name":"Sergio Contrino","orcid":"https://orcid.org/0000-0003-3409-5231"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I241749","display_name":"University of Cambridge","ror":"https://ror.org/013meh722","country_code":"GB","type":"education","lineage":["https://openalex.org/I241749"]}],"countries":["CA","GB"],"is_corresponding":false,"raw_author_name":"S. Contrino","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK","institution_ids":["https://openalex.org/I241749"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108098399","display_name":"Richard Smith","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"R. N. Smith","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077698324","display_name":"Daniela Butano","orcid":"https://orcid.org/0000-0002-0730-6622"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"D. Butano","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041214639","display_name":"Adrian R. Carr","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"A. Carr","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028139996","display_name":"Fengyuan Hu","orcid":"https://orcid.org/0000-0002-1756-7551"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"F. Hu","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060207744","display_name":"Rachel Lyne","orcid":"https://orcid.org/0000-0001-8050-402X"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"R. Lyne","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034311504","display_name":"Kim Rutherford","orcid":"https://orcid.org/0000-0001-6277-726X"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"K. Rutherford","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006506028","display_name":"Alex Kalderimis","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"A. Kalderimis","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013939926","display_name":"Julie Sullivan","orcid":"https://orcid.org/0000-0003-3209-0218"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"J. Sullivan","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5089928926","display_name":"Seth Carbon","orcid":"https://orcid.org/0000-0001-8244-1536"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"S. Carbon","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038999588","display_name":"Ellen Kephart","orcid":"https://orcid.org/0000-0002-3117-4439"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"E. T. Kephart","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039904250","display_name":"Paul Lloyd","orcid":"https://orcid.org/0000-0003-3508-5553"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"P. Lloyd","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048778673","display_name":"Eo Stinson","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"E. O. Stinson","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025956553","display_name":"Nicole Washington","orcid":"https://orcid.org/0000-0001-8936-9143"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"N. L. Washington","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5029478687","display_name":"Marc D. Perry","orcid":"https://orcid.org/0000-0001-6476-2942"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"M. D. Perry","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044676733","display_name":"Peter Ruzanov","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"P. Ruzanov","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":null,"display_name":"Z. Zha","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":false,"raw_author_name":"Z. Zha","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076920798","display_name":"Suzanna Lewis","orcid":"https://orcid.org/0000-0002-8343-612X"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"S. E. Lewis","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5052076713","display_name":"Lincoln Stein","orcid":"https://orcid.org/0000-0002-1983-4588"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"L. D. Stein","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5048731023","display_name":"Gos Micklem","orcid":"https://orcid.org/0000-0002-6883-6168"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["CA","US"],"is_corresponding":true,"raw_author_name":"G. Micklem","raw_affiliation_strings":["Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","Ontario Institute for Cancer Research, Toronto, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Genetics, University of Cambridge, Downing Street, Cambridge CB2 3EH, UK, 2 Lawrence Berkeley National Laboratory, Genomics Division, Berkeley, CA 94720, USA and 3 Ontario Institute for Cancer Research, MaRS Centre, Toronto, ON, Canada M5G 0A3","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Ontario Institute for Cancer Research, Toronto, Canada","institution_ids":["https://openalex.org/I112260969"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5048731023","https://openalex.org/A5052076713","https://openalex.org/A5076920798"],"corresponding_institution_ids":["https://openalex.org/I112260969","https://openalex.org/I148283060"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.0578,"has_fulltext":true,"cited_by_count":138,"citation_normalized_percentile":{"value":0.92261002,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":91,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D1082","last_page":"D1088"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10676","display_name":"Genetics, Aging, and Longevity in Model Organisms","score":0.9947999715805054,"subfield":{"id":"https://openalex.org/subfields/1302","display_name":"Aging"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11764","display_name":"Evolution and Genetic Dynamics","score":0.983299970626831,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9674999713897705,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8123770952224731},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7463083863258362},{"id":"https://openalex.org/keywords/encyclopedia","display_name":"Encyclopedia","score":0.5700913071632385},{"id":"https://openalex.org/keywords/exploit","display_name":"Exploit","score":0.568164050579071},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.5010247230529785},{"id":"https://openalex.org/keywords/data-sharing","display_name":"Data sharing","score":0.4835502803325653},{"id":"https://openalex.org/keywords/caenorhabditis-elegans","display_name":"Caenorhabditis elegans","score":0.47480833530426025},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.45326727628707886},{"id":"https://openalex.org/keywords/drosophila-melanogaster","display_name":"Drosophila melanogaster","score":0.44908469915390015},{"id":"https://openalex.org/keywords/download","display_name":"Download","score":0.44728440046310425},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.4462868571281433},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.4109501838684082},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3809579610824585},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3581739068031311},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.3354848027229309},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3160562515258789},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.11853805184364319},{"id":"https://openalex.org/keywords/library-science","display_name":"Library science","score":0.09626996517181396},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08016088604927063}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8123770952224731},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7463083863258362},{"id":"https://openalex.org/C148863701","wikidata":"https://www.wikidata.org/wiki/Q5292","display_name":"Encyclopedia","level":2,"score":0.5700913071632385},{"id":"https://openalex.org/C165696696","wikidata":"https://www.wikidata.org/wiki/Q11287","display_name":"Exploit","level":2,"score":0.568164050579071},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.5010247230529785},{"id":"https://openalex.org/C2779965156","wikidata":"https://www.wikidata.org/wiki/Q5227350","display_name":"Data sharing","level":3,"score":0.4835502803325653},{"id":"https://openalex.org/C2778944004","wikidata":"https://www.wikidata.org/wiki/Q91703","display_name":"Caenorhabditis elegans","level":3,"score":0.47480833530426025},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.45326727628707886},{"id":"https://openalex.org/C2780104201","wikidata":"https://www.wikidata.org/wiki/Q130888","display_name":"Drosophila melanogaster","level":3,"score":0.44908469915390015},{"id":"https://openalex.org/C2780154274","wikidata":"https://www.wikidata.org/wiki/Q7126717","display_name":"Download","level":2,"score":0.44728440046310425},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.4462868571281433},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.4109501838684082},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3809579610824585},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3581739068031311},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.3354848027229309},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3160562515258789},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.11853805184364319},{"id":"https://openalex.org/C161191863","wikidata":"https://www.wikidata.org/wiki/Q199655","display_name":"Library science","level":1,"score":0.09626996517181396},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08016088604927063},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0},{"id":"https://openalex.org/C204787440","wikidata":"https://www.wikidata.org/wiki/Q188504","display_name":"Alternative medicine","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017173","descriptor_name":"Caenorhabditis elegans","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D049750","descriptor_name":"Genome, Insect","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049750","descriptor_name":"Genome, Insect","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049750","descriptor_name":"Genome, Insect","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049751","descriptor_name":"Genome, Helminth","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049751","descriptor_name":"Genome, Helminth","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049751","descriptor_name":"Genome, Helminth","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":8,"locations":[{"id":"doi:10.1093/nar/gkr921","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr921","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1082/16957109/gkr921.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22080565","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22080565","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D1082","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D1082","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:osti.gov:1625494","is_oa":true,"landing_page_url":"https://www.osti.gov/biblio/1625494","pdf_url":null,"source":{"id":"https://openalex.org/S4306402487","display_name":"OSTI OAI (U.S. Department of Energy Office of Scientific and Technical Information)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I139351228","host_organization_name":"Office of Scientific and Technical Information","host_organization_lineage":["https://openalex.org/I139351228"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3245176","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245176","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:www.repository.cam.ac.uk:1810/278601","is_oa":true,"landing_page_url":"https://www.repository.cam.ac.uk/handle/1810/278601","pdf_url":null,"source":{"id":"https://openalex.org/S4306401777","display_name":"Apollo (University of Cambridge)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I241749","host_organization_name":"University of Cambridge","host_organization_lineage":["https://openalex.org/I241749"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"},{"id":"doi:10.17863/cam.25941","is_oa":true,"landing_page_url":"https://doi.org/10.17863/cam.25941","pdf_url":null,"source":{"id":"https://openalex.org/S7407050737","display_name":"Apollo","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"JournalArticle"},{"id":"doi:10.25504/fairsharing.ekzmjp","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.ekzmjp","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr921","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr921","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1082/16957109/gkr921.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2352133618","display_name":null,"funder_award_id":"090297/Z/09/Z","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"},{"id":"https://openalex.org/G3990732288","display_name":null,"funder_award_id":"HG004269-05","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G6082611894","display_name":"The metabolicMine project: integrated data and tools for the Common Metabolic Disease community.","funder_award_id":"090297","funder_id":"https://openalex.org/F4320311904","funder_display_name":"Wellcome Trust"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2057589481.pdf","grobid_xml":"https://content.openalex.org/works/W2057589481.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W1544923801","https://openalex.org/W2000941677","https://openalex.org/W2028133290","https://openalex.org/W2029833898","https://openalex.org/W2050554833","https://openalex.org/W2057589481","https://openalex.org/W2078744455","https://openalex.org/W2081724586","https://openalex.org/W2084191969","https://openalex.org/W2094678200","https://openalex.org/W2106831214","https://openalex.org/W2107249189","https://openalex.org/W2108157217","https://openalex.org/W2112466127","https://openalex.org/W2116423958","https://openalex.org/W2120309364","https://openalex.org/W2120423098","https://openalex.org/W2123171788","https://openalex.org/W2134038772","https://openalex.org/W2144303444","https://openalex.org/W2145477956","https://openalex.org/W2147834895","https://openalex.org/W2148966035","https://openalex.org/W2150904790","https://openalex.org/W2151397621","https://openalex.org/W2158439765","https://openalex.org/W2163965551","https://openalex.org/W2171018484","https://openalex.org/W2772934464","https://openalex.org/W2915108429","https://openalex.org/W2917375902","https://openalex.org/W4211208250","https://openalex.org/W4231824804"],"related_works":["https://openalex.org/W4223896405","https://openalex.org/W2971505853","https://openalex.org/W2465065470","https://openalex.org/W2059629050","https://openalex.org/W2258998699","https://openalex.org/W3013644380","https://openalex.org/W4297906920","https://openalex.org/W3041017960","https://openalex.org/W2074740504","https://openalex.org/W1996935079"],"abstract_inverted_index":{"In":[0],"an":[1,34,93],"effort":[2],"to":[3,66,72,130,136],"comprehensively":[4],"characterize":[5],"the":[6,10,13,22,49,61,68,83,90,107,118,125],"functional":[7],"elements":[8],"within":[9],"genomes":[11],"of":[12,27,37,48,80,106,117,120],"important":[14],"model":[15,24],"organisms":[16],"Drosophila":[17],"melanogaster":[18],"and":[19,76,101,134],"Caenorhabditis":[20],"elegans,":[21],"NHGRI":[23],"organism":[25],"Encyclopaedia":[26],"DNA":[28],"Elements":[29],"(modENCODE)":[30],"consortium":[31],"has":[32,57],"generated":[33,85],"enormous":[35],"library":[36],"genomic":[38],"data":[39,78,91,99,141],"along":[40],"with":[41,97],"detailed,":[42],"structured":[43],"information":[44],"on":[45],"all":[46],"aspects":[47],"experiments.":[50],"The":[51,110],"modMine":[52],"database":[53],"(http://intermine.modencode.org)":[54],"described":[55],"here":[56],"been":[58],"built":[59],"by":[60,86,124],"modENCODE":[62,140],"Data":[63],"Coordination":[64],"Center":[65],"allow":[67,131],"broader":[69],"research":[70],"community":[71],"(i)":[73],"search":[74,112],"for":[75],"download":[77],"sets":[79,142],"interest":[81],"among":[82],"thousands":[84],"modENCODE;":[87],"(ii)":[88],"access":[89],"in":[92],"integrated":[94],"form":[95],"together":[96],"non-modENCODE":[98],"sets;":[100],"(iii)":[102],"facilitate":[103],"fine-grained":[104],"analysis":[105],"above":[108],"data.":[109],"sophisticated":[111],"features":[113],"are":[114,128],"possible":[115],"because":[116],"collection":[119],"extensive":[121],"experimental":[122],"metadata":[123],"consortium.":[126],"Interfaces":[127],"provided":[129],"both":[132],"biologists":[133],"bioinformaticians":[135],"exploit":[137],"these":[138],"rich":[139],"now":[143],"available":[144],"via":[145],"modMine.":[146]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":9},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":11},{"year":2018,"cited_by_count":11},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":17},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":16},{"year":2013,"cited_by_count":14},{"year":2012,"cited_by_count":6}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2016-06-24T00:00:00"}
