{"id":"https://openalex.org/W2165649953","doi":"https://doi.org/10.1093/nar/gkr916","title":"YMDB: the Yeast Metabolome Database","display_name":"YMDB: the Yeast Metabolome Database","publication_year":2011,"publication_date":"2011-11-07","ids":{"openalex":"https://openalex.org/W2165649953","doi":"https://doi.org/10.1093/nar/gkr916","mag":"2165649953","pmid":"https://pubmed.ncbi.nlm.nih.gov/22064855"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr916","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkr916","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5018899558","display_name":"Timothy Jewison","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"T. Jewison","raw_affiliation_strings":["Department of Computing Science, Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E8, Canada","Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science, Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E8, Canada","institution_ids":[]},{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109701520","display_name":"Craig Knox","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"C. Knox","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5003117330","display_name":"Vanessa Neveu","orcid":"https://orcid.org/0000-0002-8501-7789"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"V. Neveu","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065759390","display_name":"Yannick Djoumbou-Feunang","orcid":"https://orcid.org/0000-0001-7850-184X"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Y. Djoumbou","raw_affiliation_strings":["Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E8 and"],"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E8 and","institution_ids":["https://openalex.org/I154425047"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113668291","display_name":"An Chi Guo","orcid":"https://orcid.org/0009-0003-7256-1317"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"A. C. Guo","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100366248","display_name":"Junho Lee","orcid":"https://orcid.org/0000-0002-6421-1195"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. Lee","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107842111","display_name":"P. Liu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"P. Liu","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078994882","display_name":"Rupsari Mandal","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. Mandal","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111402146","display_name":"R. Krishnamurthy","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. Krishnamurthy","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110237083","display_name":"I. Sinelnikov","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"I. Sinelnikov","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074143910","display_name":"Michael Wilson","orcid":"https://orcid.org/0000-0001-5892-6074"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Wilson","raw_affiliation_strings":["Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003573061","display_name":"David S. Wishart","orcid":"https://orcid.org/0000-0002-3207-2434"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I40752897","display_name":"National Institute for Nanotechnology","ror":"https://ror.org/05c0g2426","country_code":"CA","type":"facility","lineage":["https://openalex.org/I40752897","https://openalex.org/I4210159778"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"D. S. Wishart","raw_affiliation_strings":["National Institute for Nanotechnology, 11421 Saskatchewan Drive, Edmonton, AB, T6G 2M9 Canada","Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E8 and","Department of Computing Science,"],"affiliations":[{"raw_affiliation_string":"National Institute for Nanotechnology, 11421 Saskatchewan Drive, Edmonton, AB, T6G 2M9 Canada","institution_ids":["https://openalex.org/I40752897"]},{"raw_affiliation_string":"Department of Biological Sciences, University of Alberta, Edmonton, AB, T6G 2E8 and","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Department of Computing Science,","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5003573061"],"corresponding_institution_ids":["https://openalex.org/I154425047","https://openalex.org/I40752897"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.8023,"has_fulltext":true,"cited_by_count":194,"citation_normalized_percentile":{"value":0.96106423,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":97,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D815","last_page":"D820"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10750","display_name":"Fermentation and Sensory Analysis","score":0.9950000047683716,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12385","display_name":"Food Quality and Safety Studies","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1106","display_name":"Food Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metabolome","display_name":"Metabolome","score":0.9348390102386475},{"id":"https://openalex.org/keywords/metabolomics","display_name":"Metabolomics","score":0.6648945808410645},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6597826480865479},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6183142066001892},{"id":"https://openalex.org/keywords/yeast","display_name":"Yeast","score":0.5349919199943542},{"id":"https://openalex.org/keywords/saccharomyces-cerevisiae","display_name":"Saccharomyces cerevisiae","score":0.5177665948867798},{"id":"https://openalex.org/keywords/metabolite","display_name":"Metabolite","score":0.4884418547153473},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.4218760132789612},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.3750835061073303},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3682748079299927},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.24653372168540955},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.14883533120155334}],"concepts":[{"id":"https://openalex.org/C135870905","wikidata":"https://www.wikidata.org/wiki/Q903667","display_name":"Metabolome","level":3,"score":0.9348390102386475},{"id":"https://openalex.org/C21565614","wikidata":"https://www.wikidata.org/wiki/Q12149006","display_name":"Metabolomics","level":2,"score":0.6648945808410645},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6597826480865479},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6183142066001892},{"id":"https://openalex.org/C2779222958","wikidata":"https://www.wikidata.org/wiki/Q45422","display_name":"Yeast","level":2,"score":0.5349919199943542},{"id":"https://openalex.org/C2777576037","wikidata":"https://www.wikidata.org/wiki/Q719725","display_name":"Saccharomyces cerevisiae","level":3,"score":0.5177665948867798},{"id":"https://openalex.org/C2777477808","wikidata":"https://www.wikidata.org/wiki/Q407595","display_name":"Metabolite","level":2,"score":0.4884418547153473},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.4218760132789612},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.3750835061073303},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3682748079299927},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.24653372168540955},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.14883533120155334}],"mesh":[{"descriptor_ui":"D005800","descriptor_name":"Genes, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005800","descriptor_name":"Genes, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005800","descriptor_name":"Genes, Fungal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012441","descriptor_name":"Saccharomyces cerevisiae","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019906","descriptor_name":"Nuclear Magnetic Resonance, Biomolecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019906","descriptor_name":"Nuclear Magnetic Resonance, Biomolecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019906","descriptor_name":"Nuclear Magnetic Resonance, Biomolecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029701","descriptor_name":"Saccharomyces cerevisiae Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055432","descriptor_name":"Metabolomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055442","descriptor_name":"Metabolome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkr916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr916","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22064855","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22064855","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:cisti-icist.nrc-cnrc.ca:cistinparc:21270237","is_oa":true,"landing_page_url":"https://nrc-publications.canada.ca/fra/voir/objet/?id=4c8aa0fe-5fcd-44e0-bfc9-1b2df4fbab95","pdf_url":"https://nrc-publications.canada.ca/eng/view/ft/?id=4c8aa0fe-5fcd-44e0-bfc9-1b2df4fbab95","source":{"id":"https://openalex.org/S7407055245","display_name":"NPARC","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.838.6792","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.838.6792","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2011/11/07/nar.gkr916.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.848.4642","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.848.4642","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/40/D1/D815.full.pdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D815","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D815","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245085","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245085","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr916","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr916","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.6200000047683716,"id":"https://metadata.un.org/sdg/9","display_name":"Industry, innovation and infrastructure"}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1513501940","https://openalex.org/W1975147762","https://openalex.org/W1977938546","https://openalex.org/W1982185581","https://openalex.org/W1983624870","https://openalex.org/W2033377040","https://openalex.org/W2047632644","https://openalex.org/W2053385401","https://openalex.org/W2059327215","https://openalex.org/W2061636126","https://openalex.org/W2090347317","https://openalex.org/W2109327803","https://openalex.org/W2110375707","https://openalex.org/W2120428260","https://openalex.org/W2125318012","https://openalex.org/W2128601422","https://openalex.org/W2133102806","https://openalex.org/W2135842485","https://openalex.org/W2139932193","https://openalex.org/W2142923621","https://openalex.org/W2142929989","https://openalex.org/W2147714160","https://openalex.org/W2149887408","https://openalex.org/W2152607628","https://openalex.org/W2153283265","https://openalex.org/W2160629127","https://openalex.org/W2161062388","https://openalex.org/W2170146596","https://openalex.org/W2171437346","https://openalex.org/W2408878595","https://openalex.org/W4229743141","https://openalex.org/W4233060585"],"related_works":["https://openalex.org/W1996644818","https://openalex.org/W1965468642","https://openalex.org/W2093500216","https://openalex.org/W2053588008","https://openalex.org/W2916376502","https://openalex.org/W2260452057","https://openalex.org/W3101161779","https://openalex.org/W423371831","https://openalex.org/W2777729175","https://openalex.org/W4295779760"],"abstract_inverted_index":{"The":[0,43],"Yeast":[1],"Metabolome":[2,26],"Database":[3],"(YMDB,":[4],"http://www.ymdb.ca)":[5],"is":[6,99],"a":[7,199,206],"richly":[8],"annotated":[9],"'metabolomic'":[10],"database":[11,215],"containing":[12],"detailed":[13,83],"information":[14,44],"about":[15],"the":[16,24,28,66,119,232,239],"metabolome":[17],"of":[18,52,73,104,124,194,214],"Saccharomyces":[19],"cerevisiae.":[20],"Modeled":[21],"closely":[22],"after":[23],"Human":[25],"Database,":[27],"YMDB":[29,46,67,120],"contains":[30,69,121],">2000":[31],"metabolites":[32],"with":[33,102],"links":[34],"to":[35,61,163,222,227],"995":[36],"different":[37],"genes/proteins,":[38],"including":[39,129],"enzymes":[40],"and":[41,56,76,87,106,134,142,149,166,174,189,204,242],"transporters.":[42],"in":[45,95,118],"has":[47],"been":[48],"gathered":[49],"from":[50,82],"hundreds":[51],"books,":[53],"journal":[54],"articles":[55],"electronic":[57],"databases.":[58,169],"In":[59],"addition":[60],"its":[62],"comprehensive":[63,130],"literature-derived":[64],"data,":[65,139,154,157],"also":[68,179,226],"an":[70,122],"extensive":[71],"collection":[72],"experimental":[74],"intracellular":[75],"extracellular":[77],"metabolite":[78,116],"concentration":[79],"data":[80,127,175],"compiled":[81],"Mass":[84],"Spectrometry":[85],"(MS)":[86],"Nuclear":[88],"Magnetic":[89],"Resonance":[90],"(NMR)":[91],"metabolomic":[92],"analyses":[93],"performed":[94],"our":[96],"lab.":[97],"This":[98],"further":[100],"supplemented":[101],"thousands":[103],"NMR":[105,141],"MS":[107,143],"spectra":[108],"collected":[109],"on":[110],"pure,":[111],"reference":[112,140],"yeast":[113,228],"metabolites.":[114],"Each":[115],"entry":[117],"average":[123],"80":[125],"separate":[126],"fields":[128],"compound":[131],"description,":[132],"names":[133],"synonyms,":[135],"structural":[136],"information,":[137,152],"physico-chemical":[138],"spectra,":[144],"intracellular/extracellular":[145],"concentrations,":[146],"growth":[147],"conditions":[148],"substrates,":[150],"pathway":[151],"enzyme":[153],"gene/protein":[155,190],"sequence":[156,191],"as":[158,160,198,205,236,238],"well":[159,237],"numerous":[161],"hyperlinks":[162],"images,":[164],"references":[165],"other":[167],"public":[168],"Extensive":[170],"searching,":[171],"relational":[172],"querying":[173],"browsing":[176],"tools":[177],"are":[178],"provided":[180],"that":[181],"support":[182],"text,":[183],"chemical":[184],"structure,":[185],"spectral,":[186],"molecular":[187],"weight":[188],"queries.":[192],"Because":[193],"S.":[195],"cervesiae's":[196],"importance":[197],"model":[200],"organism":[201],"for":[202,208],"biologists":[203],"biofactory":[207],"industry,":[209,235],"we":[210],"believe":[211],"this":[212],"kind":[213],"could":[216],"have":[217],"considerable":[218],"appeal":[219],"not":[220],"only":[221],"metabolomics":[223],"researchers,":[224],"but":[225],"biologists,":[229,231],"systems":[230],"industrial":[233],"fermentation":[234],"beer,":[240],"wine":[241],"spirit":[243],"industry.":[244]},"counts_by_year":[{"year":2025,"cited_by_count":15},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":15},{"year":2019,"cited_by_count":13},{"year":2018,"cited_by_count":14},{"year":2017,"cited_by_count":19},{"year":2016,"cited_by_count":29},{"year":2015,"cited_by_count":19},{"year":2014,"cited_by_count":14},{"year":2013,"cited_by_count":13},{"year":2012,"cited_by_count":9}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
