{"id":"https://openalex.org/W1979059636","doi":"https://doi.org/10.1093/nar/gkr880","title":"EcoliWiki: a wiki-based community resource for Escherichia coli","display_name":"EcoliWiki: a wiki-based community resource for Escherichia coli","publication_year":2011,"publication_date":"2011-11-07","ids":{"openalex":"https://openalex.org/W1979059636","doi":"https://doi.org/10.1093/nar/gkr880","mag":"1979059636","pmid":"https://pubmed.ncbi.nlm.nih.gov/22064863"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr880","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr880","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkr880","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023540831","display_name":"Brenley K. McIntosh","orcid":null},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Brenley K. McIntosh","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103027427","display_name":"Daniel P. Renfro","orcid":"https://orcid.org/0000-0003-3457-5884"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Daniel P. Renfro","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035578156","display_name":"Gwendowlyn S. Knapp","orcid":"https://orcid.org/0000-0002-8896-9291"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Gwendowlyn S. Knapp","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5009259325","display_name":"Chanchala R. Lairikyengbam","orcid":null},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Chanchala R. Lairikyengbam","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5053304268","display_name":"Nathan Liles","orcid":"https://orcid.org/0000-0002-5748-3010"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Nathan M. Liles","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5013342266","display_name":"Lili Niu","orcid":"https://orcid.org/0000-0002-1055-7027"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Lili Niu","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051660416","display_name":"Amanda M. Supak","orcid":null},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Amanda M. Supak","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020120103","display_name":"Anand Venkatraman","orcid":"https://orcid.org/0000-0003-4429-2271"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anand Venkatraman","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063002189","display_name":"Adrienne E. Zweifel","orcid":"https://orcid.org/0000-0003-1931-2365"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Adrienne E. Zweifel","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008023525","display_name":"Deborah A. Siegele","orcid":"https://orcid.org/0000-0001-8935-0696"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Deborah A. Siegele","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5089370746","display_name":"James C. Hu","orcid":"https://orcid.org/0000-0001-9016-2684"},"institutions":[{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"James C. Hu","raw_affiliation_strings":["Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Biophysics, Texas Agrilife Research, 2Department of Computer Science and Engineering and 3Department of Biology, Texas A&M University College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5023540831"],"corresponding_institution_ids":["https://openalex.org/I91045830"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.6058,"has_fulltext":false,"cited_by_count":29,"citation_normalized_percentile":{"value":0.89838592,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"40","issue":"D1","first_page":"D1270","last_page":"D1277"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9919999837875366,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12478","display_name":"Wikis in Education and Collaboration","score":0.9904000163078308,"subfield":{"id":"https://openalex.org/subfields/3315","display_name":"Communication"},"field":{"id":"https://openalex.org/fields/33","display_name":"Social Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.988099992275238,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8066550493240356},{"id":"https://openalex.org/keywords/interoperability","display_name":"Interoperability","score":0.6165724396705627},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.587176501750946},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.5509615540504456},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5452594757080078},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.5277403593063354},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.5260457992553711},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.47691842913627625},{"id":"https://openalex.org/keywords/plasmid","display_name":"Plasmid","score":0.4598866403102875},{"id":"https://openalex.org/keywords/bacteriophage","display_name":"Bacteriophage","score":0.4524284303188324},{"id":"https://openalex.org/keywords/software","display_name":"Software","score":0.45224177837371826},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4455978572368622},{"id":"https://openalex.org/keywords/open-source","display_name":"Open source","score":0.4158191680908203},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3544570803642273},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.32962435483932495},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2364785373210907},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18809491395950317}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8066550493240356},{"id":"https://openalex.org/C20136886","wikidata":"https://www.wikidata.org/wiki/Q749647","display_name":"Interoperability","level":2,"score":0.6165724396705627},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.587176501750946},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.5509615540504456},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5452594757080078},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.5277403593063354},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.5260457992553711},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.47691842913627625},{"id":"https://openalex.org/C22744801","wikidata":"https://www.wikidata.org/wiki/Q172778","display_name":"Plasmid","level":3,"score":0.4598866403102875},{"id":"https://openalex.org/C2776441376","wikidata":"https://www.wikidata.org/wiki/Q165028","display_name":"Bacteriophage","level":4,"score":0.4524284303188324},{"id":"https://openalex.org/C2777904410","wikidata":"https://www.wikidata.org/wiki/Q7397","display_name":"Software","level":2,"score":0.45224177837371826},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4455978572368622},{"id":"https://openalex.org/C3018397939","wikidata":"https://www.wikidata.org/wiki/Q3644502","display_name":"Open source","level":3,"score":0.4158191680908203},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3544570803642273},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.32962435483932495},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2364785373210907},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18809491395950317},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D003090","descriptor_name":"Coliphages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003090","descriptor_name":"Coliphages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D003090","descriptor_name":"Coliphages","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004926","descriptor_name":"Escherichia coli","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005798","descriptor_name":"Genes, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020071","descriptor_name":"Interspersed Repetitive Sequences","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkr880","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr880","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22064863","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22064863","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D1270","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D1270","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245172","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245172","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr880","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr880","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":49,"referenced_works":["https://openalex.org/W17940155","https://openalex.org/W1499500424","https://openalex.org/W1955545161","https://openalex.org/W1966786968","https://openalex.org/W1967851661","https://openalex.org/W1987928401","https://openalex.org/W1989626479","https://openalex.org/W1996423252","https://openalex.org/W2002635898","https://openalex.org/W2006803093","https://openalex.org/W2016577330","https://openalex.org/W2018521934","https://openalex.org/W2018962053","https://openalex.org/W2035501939","https://openalex.org/W2037993016","https://openalex.org/W2041242386","https://openalex.org/W2048593866","https://openalex.org/W2053673723","https://openalex.org/W2054331129","https://openalex.org/W2055043387","https://openalex.org/W2069119484","https://openalex.org/W2078569994","https://openalex.org/W2082202339","https://openalex.org/W2096525273","https://openalex.org/W2098425296","https://openalex.org/W2103017472","https://openalex.org/W2107580398","https://openalex.org/W2109763816","https://openalex.org/W2110946298","https://openalex.org/W2113333711","https://openalex.org/W2118200955","https://openalex.org/W2131736388","https://openalex.org/W2133151663","https://openalex.org/W2134153749","https://openalex.org/W2139915240","https://openalex.org/W2140055375","https://openalex.org/W2140275799","https://openalex.org/W2141362201","https://openalex.org/W2141885858","https://openalex.org/W2145477956","https://openalex.org/W2152763121","https://openalex.org/W2152770371","https://openalex.org/W2157824137","https://openalex.org/W2163039084","https://openalex.org/W2612240612","https://openalex.org/W4210623056","https://openalex.org/W4237560675","https://openalex.org/W4244606935","https://openalex.org/W6629874611"],"related_works":["https://openalex.org/W1560279942","https://openalex.org/W170420164","https://openalex.org/W2117035204","https://openalex.org/W3100865053","https://openalex.org/W2794325377","https://openalex.org/W3150786161","https://openalex.org/W2999594376","https://openalex.org/W2913182208","https://openalex.org/W2063853667","https://openalex.org/W1994927702"],"abstract_inverted_index":{"EcoliWiki":[0,47,75,94,120],"is":[1],"the":[2,7,36,40,96],"community":[3],"annotation":[4],"component":[5],"of":[6,23,35,39,56],"PortEco":[8],"(http://porteco.org;":[9],"formerly":[10],"EcoliHub)":[11],"project,":[12],"an":[13],"online":[14,124],"data":[15,73],"resource":[16],"that":[17],"integrates":[18,95],"information":[19],"on":[20],"laboratory":[21,82],"strains":[22],"Escherichia":[24],"coli,":[25],"its":[26],"phages,":[27],"plasmids":[28],"and":[29,91,105],"mobile":[30],"genetic":[31],"elements.":[32],"As":[33],"one":[34],"early":[37],"adopters":[38],"wiki":[41,98],"approach":[42],"to":[43,50,68,109],"model":[44,64,117],"organism":[45,118],"databases,":[46],"was":[48],"designed":[49],"not":[51],"only":[52],"facilitate":[53],"community-driven":[54],"sharing":[55],"biological":[57],"knowledge":[58],"about":[59],"E.":[60,83],"coli":[61,84],"as":[62],"a":[63],"organism,":[65],"but":[66],"also":[67],"be":[69,114,122],"interoperable":[70],"with":[71,100],"other":[72,101],"resources.":[74],"content":[76],"currently":[77],"covers":[78],"genes":[79],"from":[80],"five":[81],"strains,":[85],"21":[86],"bacteriophage":[87],"genomes,":[88],"F":[89],"plasmid":[90],"eight":[92],"transposons.":[93],"Mediawiki":[97],"platform":[99],"open-source":[102],"software":[103,107],"tools":[104],"in-house":[106],"development":[108],"extend":[110],"how":[111],"wikis":[112],"can":[113,121],"used":[115],"for":[116],"databases.":[119],"accessed":[123],"at":[125],"http://ecoliwiki.net.":[126]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":3},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":4}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
