{"id":"https://openalex.org/W2140831051","doi":"https://doi.org/10.1093/nar/gkr703","title":"OPM database and PPM web server: resources for positioning of proteins in membranes","display_name":"OPM database and PPM web server: resources for positioning of proteins in membranes","publication_year":2011,"publication_date":"2011-09-02","ids":{"openalex":"https://openalex.org/W2140831051","doi":"https://doi.org/10.1093/nar/gkr703","mag":"2140831051","pmid":"https://pubmed.ncbi.nlm.nih.gov/21890895"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr703","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr703","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D370/16955749/gkr703.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D370/16955749/gkr703.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5017804727","display_name":"Mikhail A. Lomize","orcid":null},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]},{"id":"https://openalex.org/I4210114445","display_name":"Michigan Medicine","ror":"https://ror.org/01zcpa714","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I4210114445"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Mikhail A. Lomize","raw_affiliation_strings":["Department of Medicinal Chemistry, College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA. almz@umich.edu","Department of Medicinal Chemistry, College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA. almz@umich.edu","institution_ids":["https://openalex.org/I27837315","https://openalex.org/I4210114445"]},{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065, USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006189599","display_name":"Irina D. Pogozheva","orcid":"https://orcid.org/0000-0002-3024-9574"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Irina D. Pogozheva","raw_affiliation_strings":["Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083106666","display_name":"Hyeon Joo","orcid":"https://orcid.org/0000-0003-4844-2417"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hyeon Joo","raw_affiliation_strings":["Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079002496","display_name":"Henry I. Mosberg","orcid":"https://orcid.org/0000-0002-4107-8870"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Henry I. Mosberg","raw_affiliation_strings":["Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5056114039","display_name":"Andrei L. Lomize","orcid":"https://orcid.org/0000-0002-3044-7597"},"institutions":[{"id":"https://openalex.org/I27837315","display_name":"University of Michigan","ror":"https://ror.org/00jmfr291","country_code":"US","type":"education","lineage":["https://openalex.org/I27837315"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Andrei L. Lomize","raw_affiliation_strings":["Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2 Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]},{"raw_affiliation_string":"Department of Medicinal Chemistry, College of Pharmacy and 2Department of Electrical Engineering and Computer Science, University of Michigan, 428 Church Street, Ann Arbor, MI 48109-1065 USA","institution_ids":["https://openalex.org/I27837315"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5056114039"],"corresponding_institution_ids":["https://openalex.org/I27837315"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":9.8536,"has_fulltext":true,"cited_by_count":2287,"citation_normalized_percentile":{"value":0.98926088,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D370","last_page":"D376"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10407","display_name":"Lipid Membrane Structure and Behavior","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.996999979019165,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5865727663040161},{"id":"https://openalex.org/keywords/membrane","display_name":"Membrane","score":0.5508055686950684},{"id":"https://openalex.org/keywords/lipid-bilayer","display_name":"Lipid bilayer","score":0.5466322898864746},{"id":"https://openalex.org/keywords/membrane-protein","display_name":"Membrane protein","score":0.526774525642395},{"id":"https://openalex.org/keywords/transmembrane-protein","display_name":"Transmembrane protein","score":0.49774840474128723},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.49561870098114014},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.422350138425827},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4168752431869507},{"id":"https://openalex.org/keywords/online-database","display_name":"Online database","score":0.41153717041015625},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.38559582829475403},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.38511133193969727},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.274135947227478},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1677033007144928},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1597563624382019}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5865727663040161},{"id":"https://openalex.org/C41625074","wikidata":"https://www.wikidata.org/wiki/Q176088","display_name":"Membrane","level":2,"score":0.5508055686950684},{"id":"https://openalex.org/C39944091","wikidata":"https://www.wikidata.org/wiki/Q423279","display_name":"Lipid bilayer","level":3,"score":0.5466322898864746},{"id":"https://openalex.org/C144647389","wikidata":"https://www.wikidata.org/wiki/Q423042","display_name":"Membrane protein","level":3,"score":0.526774525642395},{"id":"https://openalex.org/C24530287","wikidata":"https://www.wikidata.org/wiki/Q424204","display_name":"Transmembrane protein","level":3,"score":0.49774840474128723},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.49561870098114014},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.422350138425827},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4168752431869507},{"id":"https://openalex.org/C2777715827","wikidata":"https://www.wikidata.org/wiki/Q7094076","display_name":"Online database","level":2,"score":0.41153717041015625},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.38559582829475403},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.38511133193969727},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.274135947227478},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1677033007144928},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1597563624382019},{"id":"https://openalex.org/C170493617","wikidata":"https://www.wikidata.org/wiki/Q208467","display_name":"Receptor","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008565","descriptor_name":"Membrane Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkr703","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr703","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D370/16955749/gkr703.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21890895","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21890895","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.987.7409","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.987.7409","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/40/D1/D370.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.995.7541","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.995.7541","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2011/09/02/nar.gkr703.full.pdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D370","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D370","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245162","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245162","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr703","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr703","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D370/16955749/gkr703.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/6","display_name":"Clean water and sanitation","score":0.4300000071525574}],"awards":[{"id":"https://openalex.org/G1202531376","display_name":null,"funder_award_id":"5R01DA003910","funder_id":"https://openalex.org/F4320337347","funder_display_name":"National Institute on Drug Abuse"},{"id":"https://openalex.org/G511048797","display_name":null,"funder_award_id":"5R01DA003910","funder_id":"https://openalex.org/F4320332161","funder_display_name":"National Institutes of Health"},{"id":"https://openalex.org/G5535795697","display_name":"Orientations of Proteins in Membranes: Tools and Database","funder_award_id":"0849713","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7025059397","display_name":null,"funder_award_id":"P30 DK020572","funder_id":"https://openalex.org/F4320337357","funder_display_name":"National Institute of Diabetes and Digestive and Kidney Diseases"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337347","display_name":"National Institute on Drug Abuse","ror":"https://ror.org/00fq5cm18"},{"id":"https://openalex.org/F4320337357","display_name":"National Institute of Diabetes and Digestive and Kidney Diseases","ror":"https://ror.org/00adh9b73"},{"id":"https://openalex.org/F4320337398","display_name":"Division of Biological Infrastructure","ror":"https://ror.org/04qn9mx93"}],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2140831051.pdf"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W255996521","https://openalex.org/W1989762591","https://openalex.org/W1992928135","https://openalex.org/W1995994436","https://openalex.org/W2006719424","https://openalex.org/W2014588856","https://openalex.org/W2021717885","https://openalex.org/W2021966802","https://openalex.org/W2029653438","https://openalex.org/W2031815624","https://openalex.org/W2035503835","https://openalex.org/W2038126024","https://openalex.org/W2047544230","https://openalex.org/W2050469283","https://openalex.org/W2056402029","https://openalex.org/W2060055736","https://openalex.org/W2062663912","https://openalex.org/W2062709131","https://openalex.org/W2066750067","https://openalex.org/W2078126071","https://openalex.org/W2083334314","https://openalex.org/W2097775366","https://openalex.org/W2101762237","https://openalex.org/W2114347076","https://openalex.org/W2119130600","https://openalex.org/W2128653811","https://openalex.org/W2141885858","https://openalex.org/W2143632667","https://openalex.org/W2145020089","https://openalex.org/W2146250729","https://openalex.org/W2147796031","https://openalex.org/W2153654642","https://openalex.org/W2156207120","https://openalex.org/W2156835500","https://openalex.org/W2162274915","https://openalex.org/W2163137692","https://openalex.org/W2168269595","https://openalex.org/W2171681733","https://openalex.org/W2182100874","https://openalex.org/W2772934464","https://openalex.org/W4211208250","https://openalex.org/W4214952473","https://openalex.org/W6681913895","https://openalex.org/W6685908829"],"related_works":["https://openalex.org/W1977121829","https://openalex.org/W2097747021","https://openalex.org/W2075741622","https://openalex.org/W2129838159","https://openalex.org/W1974240269","https://openalex.org/W2151889417","https://openalex.org/W2044159875","https://openalex.org/W2046816865","https://openalex.org/W2107584639","https://openalex.org/W1550113321"],"abstract_inverted_index":{"The":[0,121,148,171],"Orientations":[1],"of":[2,17,22,80,105,146,153,162,190],"Proteins":[3,63],"in":[4,26,143,188],"Membranes":[5],"(OPM)":[6],"database":[7,123,149,172],"is":[8,124,173],"a":[9],"curated":[10],"web":[11],"resource":[12],"that":[13,55,95],"provides":[14],"spatial":[15,186],"positions":[16,79,187],"membrane-bound":[18],"peptides":[19,50,156],"and":[20,36,46,49,69,71,102,118,155,165],"proteins":[21,48,81,107,154,193],"known":[23],"three-dimensional":[24],"structure":[25],"the":[27,85,91,98,106,109,115,137,176],"lipid":[28,86],"bilayer,":[29],"together":[30],"with":[31,82,108,157],"their":[32],"structural":[33],"classification,":[34,139],"topology":[35],"intracellular":[37],"localization.":[38],"OPM":[39,122],"currently":[40],"contains":[41],"more":[42],"than":[43],"1200":[44],"transmembrane":[45],"peripheral":[47],"from":[51],"approximately":[52,57],"350":[53],"organisms":[54],"represent":[56],"3800":[58],"Protein":[59],"Data":[60,129],"Bank":[61],"entries.":[62],"are":[64,88,169],"classified":[65],"into":[66],"classes,":[67],"superfamilies":[68],"families":[70],"assigned":[72],"to":[73,84],"21":[74],"distinct":[75],"membrane":[76,158],"types.":[77],"Spatial":[78],"respect":[83],"bilayer":[87],"optimized":[89],"by":[90,114,175],"PPM":[92,177],"2.0":[93],"method":[94],"accounts":[96],"for":[97,184],"hydrophobic,":[99],"hydrogen":[100],"bonding":[101],"electrostatic":[103],"interactions":[104],"anisotropic":[110],"water-lipid":[111],"environment":[112],"described":[113],"dielectric":[116],"constant":[117],"hydrogen-bonding":[119],"profiles.":[120],"freely":[125],"accessible":[126],"at":[127],"http://opm.phar.umich.edu.":[128],"can":[130,181],"be":[131,182],"sorted,":[132],"searched":[133],"or":[134,195],"retrieved":[135],"using":[136],"hierarchical":[138],"source":[140],"organism,":[141],"localization":[142],"different":[144],"types":[145],"membranes.":[147],"offers":[150],"downloadable":[151],"coordinates":[152],"boundaries.":[159],"A":[160],"gallery":[161],"protein":[163],"images":[164],"several":[166],"visualization":[167],"tools":[168],"provided.":[170],"supplemented":[174],"server":[178],"(http://opm.phar.umich.edu/server.php)":[179],"which":[180],"used":[183],"calculating":[185],"membranes":[189],"newly":[191],"determined":[192],"structures":[194],"theoretical":[196],"models.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":132},{"year":2025,"cited_by_count":299},{"year":2024,"cited_by_count":301},{"year":2023,"cited_by_count":281},{"year":2022,"cited_by_count":257},{"year":2021,"cited_by_count":299},{"year":2020,"cited_by_count":214},{"year":2019,"cited_by_count":160},{"year":2018,"cited_by_count":114},{"year":2017,"cited_by_count":68},{"year":2016,"cited_by_count":46},{"year":2015,"cited_by_count":34},{"year":2014,"cited_by_count":36},{"year":2013,"cited_by_count":33},{"year":2012,"cited_by_count":12}],"updated_date":"2026-07-22T07:51:19.307946","created_date":"2025-10-10T00:00:00"}
