{"id":"https://openalex.org/W2027847170","doi":"https://doi.org/10.1093/nar/gkr483","title":"KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases","display_name":"KOBAS 2.0: a web server for annotation and identification of enriched pathways and diseases","publication_year":2011,"publication_date":"2011-06-27","ids":{"openalex":"https://openalex.org/W2027847170","doi":"https://doi.org/10.1093/nar/gkr483","mag":"2027847170","pmid":"https://pubmed.ncbi.nlm.nih.gov/21715386"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr483","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr483","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W316/18784714/gkr483.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W316/18784714/gkr483.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5022568174","display_name":"Chen Xie","orcid":"https://orcid.org/0000-0003-4753-1151"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chen Xie","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113706218","display_name":"Xizeng Mao","orcid":null},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I165733156","display_name":"University of Georgia","ror":"https://ror.org/00te3t702","country_code":"US","type":"education","lineage":["https://openalex.org/I165733156"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"Xizeng Mao","raw_affiliation_strings":["Computational Systems Biology Lab, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, University of Georgia, USA,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Computational Systems Biology Lab, Department of Biochemistry and Molecular Biology, and Institute of Bioinformatics, University of Georgia, USA,","institution_ids":["https://openalex.org/I165733156"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020070420","display_name":"Jiaju Huang","orcid":null},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Jiaju Huang","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067722692","display_name":"Yang Ding","orcid":"https://orcid.org/0000-0003-2894-7303"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Yang Ding","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068746343","display_name":"Jianmin Wu","orcid":"https://orcid.org/0000-0002-8876-128X"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]}],"countries":["AU"],"is_corresponding":false,"raw_author_name":"Jianmin Wu","raw_affiliation_strings":["Cancer Research Program, Garvan Institute of Medical Research, 384 Victoria Street, Darlinghurst, NSW, Australia and","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Cancer Research Program, Garvan Institute of Medical Research, 384 Victoria Street, Darlinghurst, NSW, Australia and","institution_ids":["https://openalex.org/I136750679"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083380159","display_name":"Shan Dong","orcid":"https://orcid.org/0000-0001-9130-0225"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Shan Dong","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024297841","display_name":"Lei Kong","orcid":"https://orcid.org/0000-0003-1162-2158"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Lei Kong","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5048549975","display_name":"Ge Gao","orcid":"https://orcid.org/0000-0001-6470-8815"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Ge Gao","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042577846","display_name":"Chuan\u2010Yun Li","orcid":"https://orcid.org/0000-0002-8008-8430"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Chuan-Yun Li","raw_affiliation_strings":["Laboratory of Bioinformatics and Genomic Medicine, Institute of Molecular Medicine, Peking University, Beijing, China","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Laboratory of Bioinformatics and Genomic Medicine, Institute of Molecular Medicine, Peking University, Beijing, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5022243401","display_name":"Liping Wei","orcid":"https://orcid.org/0000-0002-1795-8755"},"institutions":[{"id":"https://openalex.org/I136750679","display_name":"Garvan Institute of Medical Research","ror":"https://ror.org/01b3dvp57","country_code":"AU","type":"nonprofit","lineage":["https://openalex.org/I136750679","https://openalex.org/I4210087284"]},{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["AU","CN"],"is_corresponding":false,"raw_author_name":"Liping Wei","raw_affiliation_strings":["Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","Garvan Institute of Medical Research, Darlinghurst, Australia"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Center for Bioinformatics, State Key Laboratory of Protein and Plant Gene Research, College of Life Sciences, Peking University, Beijing, China,","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"Garvan Institute of Medical Research, Darlinghurst, Australia","institution_ids":["https://openalex.org/I136750679"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":10.7036,"has_fulltext":true,"cited_by_count":5513,"citation_normalized_percentile":{"value":0.99061776,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"39","issue":"suppl_2","first_page":"W316","last_page":"W322"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9991000294685364,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9934999942779541,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9876999855041504,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9366834163665771},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7222588658332825},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6367405652999878},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5447259545326233},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5209730267524719},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4613807797431946},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.4543319642543793},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3324035406112671},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3299647867679596},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.11519110202789307},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.07731011509895325}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9366834163665771},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7222588658332825},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6367405652999878},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5447259545326233},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5209730267524719},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4613807797431946},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.4543319642543793},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3324035406112671},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3299647867679596},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.11519110202789307},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.07731011509895325}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053858","descriptor_name":"Metabolic Networks and Pathways","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkr483","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr483","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W316/18784714/gkr483.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21715386","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21715386","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3125809","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3125809","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr483","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr483","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W316/18784714/gkr483.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G2953865927","display_name":null,"funder_award_id":"31025014","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"},{"id":"https://openalex.org/G6051721105","display_name":null,"funder_award_id":"2011CBA01102","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2027847170.pdf","grobid_xml":"https://content.openalex.org/works/W2027847170.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1596515083","https://openalex.org/W1965758444","https://openalex.org/W1980548655","https://openalex.org/W1994547959","https://openalex.org/W1997921822","https://openalex.org/W1999895438","https://openalex.org/W2028133290","https://openalex.org/W2036648622","https://openalex.org/W2043610202","https://openalex.org/W2048296798","https://openalex.org/W2050667238","https://openalex.org/W2057015734","https://openalex.org/W2065702910","https://openalex.org/W2069969538","https://openalex.org/W2096766502","https://openalex.org/W2098425296","https://openalex.org/W2103017472","https://openalex.org/W2104488717","https://openalex.org/W2105106534","https://openalex.org/W2105381419","https://openalex.org/W2106323366","https://openalex.org/W2110065044","https://openalex.org/W2115235175","https://openalex.org/W2116211027","https://openalex.org/W2117446594","https://openalex.org/W2124388496","https://openalex.org/W2124954099","https://openalex.org/W2126393500","https://openalex.org/W2127287402","https://openalex.org/W2127938920","https://openalex.org/W2133465414","https://openalex.org/W2139655181","https://openalex.org/W2144266296","https://openalex.org/W2151066815","https://openalex.org/W2155331065","https://openalex.org/W2155592392","https://openalex.org/W2158217645","https://openalex.org/W2159482845","https://openalex.org/W2159941448","https://openalex.org/W2160697532","https://openalex.org/W2160699408","https://openalex.org/W2171030481","https://openalex.org/W2171437346","https://openalex.org/W4294216483"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W4405124681","https://openalex.org/W1533177136","https://openalex.org/W4380994516"],"abstract_inverted_index":{"High-throughput":[0],"experimental":[1],"technologies":[2],"often":[3],"identify":[4,26,85],"dozens":[5],"to":[6,25,63,84],"hundreds":[7],"of":[8,52],"genes":[9,22,53,64],"related":[10],"to,":[11],"or":[12,17],"changed":[13],"in,":[14],"a":[15,42],"biological":[16,27],"pathological":[18],"process.":[19],"From":[20],"these":[21],"one":[23],"wants":[24],"pathways":[28,56,89],"that":[29,35],"may":[30,36],"be":[31,37,127],"involved":[32],"and":[33,57,74,90,108,110,120],"diseases":[34],"implicated.":[38],"Here,":[39],"we":[40],"report":[41],"web":[43],"server,":[44],"KOBAS":[45,92,124],"2.0,":[46],"which":[47],"annotates":[48],"an":[49],"input":[50],"set":[51],"with":[54,65],"putative":[55],"disease":[58,113],"relationships":[59],"based":[60],"on":[61],"mapping":[62,73],"known":[66],"annotations.":[67],"It":[68,79],"allows":[69],"for":[70],"both":[71],"ID":[72],"cross-species":[75],"sequence":[76],"similarity":[77],"mapping.":[78],"then":[80],"performs":[81],"statistical":[82],"tests":[83],"statistically":[86],"significantly":[87],"enriched":[88],"diseases.":[91],"2.0":[93,125],"incorporates":[94],"knowledge":[95],"across":[96],"1327":[97],"species":[98],"from":[99],"5":[100,111],"pathway":[101],"databases":[102,114],"(KEGG":[103],"PATHWAY,":[104],"PID,":[105],"BioCyc,":[106],"Reactome":[107],"Panther)":[109],"human":[112],"(OMIM,":[115],"KEGG":[116],"DISEASE,":[117],"FunDO,":[118],"GAD":[119],"NHGRI":[121],"GWAS":[122],"Catalog).":[123],"can":[126],"accessed":[128],"at":[129],"http://kobas.cbi.pku.edu.cn.":[130]},"counts_by_year":[{"year":2026,"cited_by_count":167},{"year":2025,"cited_by_count":401},{"year":2024,"cited_by_count":683},{"year":2023,"cited_by_count":608},{"year":2022,"cited_by_count":793},{"year":2021,"cited_by_count":953},{"year":2020,"cited_by_count":685},{"year":2019,"cited_by_count":435},{"year":2018,"cited_by_count":274},{"year":2017,"cited_by_count":193},{"year":2016,"cited_by_count":144},{"year":2015,"cited_by_count":86},{"year":2014,"cited_by_count":55},{"year":2013,"cited_by_count":25},{"year":2012,"cited_by_count":7}],"updated_date":"2026-07-19T07:52:34.831488","created_date":"2025-10-10T00:00:00"}
