{"id":"https://openalex.org/W2152800101","doi":"https://doi.org/10.1093/nar/gkr284","title":"Update of PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence","display_name":"Update of PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence","publication_year":2011,"publication_date":"2011-05-23","ids":{"openalex":"https://openalex.org/W2152800101","doi":"https://doi.org/10.1093/nar/gkr284","mag":"2152800101","pmid":"https://pubmed.ncbi.nlm.nih.gov/21609959"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr284","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr284","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W385/18782589/gkr284.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W385/18782589/gkr284.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101486936","display_name":"Hanbing Rao","orcid":"https://orcid.org/0000-0001-6540-3554"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"H. B. Rao","raw_affiliation_strings":["College of Chemistry, Sichuan University, Chengdu, 610064, PR China","College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Chemistry, Sichuan University, Chengdu, 610064, PR China","institution_ids":["https://openalex.org/I24185976"]},{"raw_affiliation_string":"College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100755257","display_name":"Feng Zhu","orcid":"https://orcid.org/0000-0001-8069-0053"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN","SG"],"is_corresponding":false,"raw_author_name":"F. Zhu","raw_affiliation_strings":["College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,","Department of Pharmacy, Bioinformatics and Drug Design Group, National University of Singapore, Singapore 117543,"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,","institution_ids":["https://openalex.org/I24185976"]},{"raw_affiliation_string":"Department of Pharmacy, Bioinformatics and Drug Design Group, National University of Singapore, Singapore 117543,","institution_ids":["https://openalex.org/I165932596"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055029301","display_name":"Guobin Yang","orcid":"https://orcid.org/0000-0002-6791-8938"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"G. B. Yang","raw_affiliation_strings":["College of Chemical Engineering, Sichuan University, Chengdu 610064 and"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Chemical Engineering, Sichuan University, Chengdu 610064 and","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5065982075","display_name":"Zhuojian Li","orcid":"https://orcid.org/0000-0001-5450-7219"},"institutions":[{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Z. R. Li","raw_affiliation_strings":["College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,","State Key Laboratory of Biotherapy, Sichuan University, Chengdu 610041, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Chemistry, Sichuan University, Chengdu, 610064, P. R. China,","institution_ids":["https://openalex.org/I24185976"]},{"raw_affiliation_string":"State Key Laboratory of Biotherapy, Sichuan University, Chengdu 610041, P. R. China","institution_ids":["https://openalex.org/I24185976"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5077700312","display_name":"Yu Chen","orcid":"https://orcid.org/0000-0002-5473-8022"},"institutions":[{"id":"https://openalex.org/I165932596","display_name":"National University of Singapore","ror":"https://ror.org/01tgyzw49","country_code":"SG","type":"education","lineage":["https://openalex.org/I165932596"]},{"id":"https://openalex.org/I24185976","display_name":"Sichuan University","ror":"https://ror.org/011ashp19","country_code":"CN","type":"education","lineage":["https://openalex.org/I24185976"]}],"countries":["CN","SG"],"is_corresponding":false,"raw_author_name":"Y. Z. Chen","raw_affiliation_strings":["Department of Pharmacy, Bioinformatics and Drug Design Group, National University of Singapore, Singapore 117543,","State Key Laboratory of Biotherapy, Sichuan University, Chengdu 610041, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Pharmacy, Bioinformatics and Drug Design Group, National University of Singapore, Singapore 117543,","institution_ids":["https://openalex.org/I165932596"]},{"raw_affiliation_string":"State Key Laboratory of Biotherapy, Sichuan University, Chengdu 610041, P. R. China","institution_ids":["https://openalex.org/I24185976"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5101486936"],"corresponding_institution_ids":["https://openalex.org/I24185976"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":9.9765,"has_fulltext":true,"cited_by_count":362,"citation_normalized_percentile":{"value":0.98882593,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":98,"max":100},"biblio":{"volume":"39","issue":"suppl_2","first_page":"W385","last_page":"W390"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/amino-acid","display_name":"Amino acid","score":0.5951554775238037},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.5630466938018799},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5588024854660034},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5460115671157837},{"id":"https://openalex.org/keywords/peptide","display_name":"Peptide","score":0.5297095775604248},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5076285600662231},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.46374592185020447},{"id":"https://openalex.org/keywords/small-molecule","display_name":"Small molecule","score":0.45142167806625366},{"id":"https://openalex.org/keywords/protein-sequencing","display_name":"Protein sequencing","score":0.4506259262561798},{"id":"https://openalex.org/keywords/pseudo-amino-acid-composition","display_name":"Pseudo amino acid composition","score":0.4319693148136139},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.4245760142803192},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.40809082984924316},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.16742181777954102},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09497693181037903},{"id":"https://openalex.org/keywords/dipeptide","display_name":"Dipeptide","score":0.08009904623031616}],"concepts":[{"id":"https://openalex.org/C515207424","wikidata":"https://www.wikidata.org/wiki/Q8066","display_name":"Amino acid","level":2,"score":0.5951554775238037},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.5630466938018799},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5588024854660034},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5460115671157837},{"id":"https://openalex.org/C2779281246","wikidata":"https://www.wikidata.org/wiki/Q172847","display_name":"Peptide","level":2,"score":0.5297095775604248},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5076285600662231},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.46374592185020447},{"id":"https://openalex.org/C161624437","wikidata":"https://www.wikidata.org/wiki/Q1988322","display_name":"Small molecule","level":2,"score":0.45142167806625366},{"id":"https://openalex.org/C10010492","wikidata":"https://www.wikidata.org/wiki/Q3142557","display_name":"Protein sequencing","level":4,"score":0.4506259262561798},{"id":"https://openalex.org/C2780362125","wikidata":"https://www.wikidata.org/wiki/Q7254464","display_name":"Pseudo amino acid composition","level":4,"score":0.4319693148136139},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.4245760142803192},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.40809082984924316},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.16742181777954102},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09497693181037903},{"id":"https://openalex.org/C2779138802","wikidata":"https://www.wikidata.org/wiki/Q418602","display_name":"Dipeptide","level":3,"score":0.08009904623031616},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D010455","descriptor_name":"Peptides","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkr284","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr284","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W385/18782589/gkr284.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21609959","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21609959","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:scholarbank.nus.edu.sg:10635/106485","is_oa":false,"landing_page_url":"http://scholarbank.nus.edu.sg/handle/10635/106485","pdf_url":null,"source":{"id":"https://openalex.org/S7407052290","display_name":"National University of Singapore","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Scopus","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3125735","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3125735","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr284","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr284","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_2/W385/18782589/gkr284.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8037185293","display_name":null,"funder_award_id":"20973118","funder_id":"https://openalex.org/F4320321001","funder_display_name":"National Natural Science Foundation of China"}],"funders":[{"id":"https://openalex.org/F4320321001","display_name":"National Natural Science Foundation of China","ror":"https://ror.org/01h0zpd94"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2152800101.pdf","grobid_xml":"https://content.openalex.org/works/W2152800101.grobid-xml"},"referenced_works_count":84,"referenced_works":["https://openalex.org/W86661845","https://openalex.org/W175148379","https://openalex.org/W176685087","https://openalex.org/W1496604422","https://openalex.org/W1545231783","https://openalex.org/W1971894358","https://openalex.org/W1984685993","https://openalex.org/W1984794455","https://openalex.org/W1985204165","https://openalex.org/W1992577925","https://openalex.org/W1993711987","https://openalex.org/W1994595453","https://openalex.org/W2005116846","https://openalex.org/W2007436490","https://openalex.org/W2009850217","https://openalex.org/W2014594785","https://openalex.org/W2014731953","https://openalex.org/W2024984486","https://openalex.org/W2026398446","https://openalex.org/W2030104079","https://openalex.org/W2035146707","https://openalex.org/W2038681300","https://openalex.org/W2042084565","https://openalex.org/W2044573154","https://openalex.org/W2045586456","https://openalex.org/W2045911289","https://openalex.org/W2046788335","https://openalex.org/W2047672715","https://openalex.org/W2052611179","https://openalex.org/W2054068479","https://openalex.org/W2060287713","https://openalex.org/W2064790714","https://openalex.org/W2066201825","https://openalex.org/W2069392850","https://openalex.org/W2070371693","https://openalex.org/W2071883748","https://openalex.org/W2072864293","https://openalex.org/W2075006095","https://openalex.org/W2082698293","https://openalex.org/W2088065111","https://openalex.org/W2092172294","https://openalex.org/W2093788819","https://openalex.org/W2094173044","https://openalex.org/W2094403468","https://openalex.org/W2096223584","https://openalex.org/W2096428707","https://openalex.org/W2100549317","https://openalex.org/W2101581128","https://openalex.org/W2103505761","https://openalex.org/W2107340752","https://openalex.org/W2107427637","https://openalex.org/W2109109045","https://openalex.org/W2109831613","https://openalex.org/W2112797448","https://openalex.org/W2114358087","https://openalex.org/W2114704981","https://openalex.org/W2117403572","https://openalex.org/W2117767830","https://openalex.org/W2120691371","https://openalex.org/W2128017222","https://openalex.org/W2129368756","https://openalex.org/W2136769496","https://openalex.org/W2139492479","https://openalex.org/W2139949430","https://openalex.org/W2150893872","https://openalex.org/W2153838454","https://openalex.org/W2154865259","https://openalex.org/W2160979370","https://openalex.org/W2164260969","https://openalex.org/W2167884443","https://openalex.org/W2168272116","https://openalex.org/W2170858229","https://openalex.org/W2171412484","https://openalex.org/W2171753456","https://openalex.org/W2171918239","https://openalex.org/W2199928338","https://openalex.org/W2214805757","https://openalex.org/W2399767476","https://openalex.org/W2434885320","https://openalex.org/W2466152945","https://openalex.org/W2954364924","https://openalex.org/W4213345021","https://openalex.org/W4249920046","https://openalex.org/W4285719527"],"related_works":["https://openalex.org/W2123706975","https://openalex.org/W1987193419","https://openalex.org/W2574994322","https://openalex.org/W1991919669","https://openalex.org/W2046691535","https://openalex.org/W576256462","https://openalex.org/W2160115806","https://openalex.org/W2008162067","https://openalex.org/W1996989509","https://openalex.org/W4389980359"],"abstract_inverted_index":{"Sequence-derived":[0],"structural":[1,180],"and":[2,11,16,21,38,51,55,71,88,100,113,136,138,156,167,190],"physicochemical":[3],"features":[4,35,153],"have":[5,57,163],"been":[6,25,58,164],"extensively":[7,165],"used":[8,34,168],"for":[9,31,66,77,85,98,120,134,147,154,175],"analyzing":[10],"predicting":[12,176],"structural,":[13],"functional,":[14],"expression":[15],"interaction":[17],"profiles":[18],"of":[19,36,49,69,80,132,142,172,178,187,195,202],"proteins":[20,37,99,135,177],"peptides.":[22],"PROFEAT":[23,127,198],"has":[24],"developed":[26],"as":[27,117,119],"a":[28,139,170],"web":[29],"server":[30],"computing":[32,67],"commonly":[33],"peptides":[39,101,186],"from":[40],"amino":[41,110],"acid":[42,103,107,111],"sequence.":[43],"To":[44],"facilitate":[45],"more":[46,143],"extensive":[47],"studies":[48],"protein":[50,81],"peptides,":[52,137],"numerous":[53],"improvements":[54],"updates":[56],"made":[59],"to":[60],"PROFEAT.":[61],"We":[62,92],"added":[63,94],"new":[64,95],"functions":[65,189],"descriptors":[68,76,84,133,146],"protein-protein":[70,155,184],"protein-small":[72,157],"molecule":[73,90,158],"interactions,":[74,185],"segment":[75],"local":[78],"properties":[79,112],"sequences,":[82],"topological":[83,115,124],"peptide":[86],"sequences":[87],"small":[89,121,148,196],"structures.":[91],"also":[93],"feature":[96,130,140],"groups":[97,131],"(pseudo-amino":[102],"composition,":[104,108],"amphiphilic":[105],"pseudo-amino":[106],"total":[109],"atomic-level":[114],"descriptors)":[116],"well":[118],"molecules":[122,149],"(atomic-level":[123],"descriptors).":[125],"Overall,":[126],"computes":[128],"11":[129],"group":[141],"than":[144],"400":[145],"plus":[150],"the":[151],"derived":[152],"interactions.":[159],"Our":[160],"computational":[161],"algorithms":[162],"tested":[166],"in":[169],"number":[171],"published":[173],"works":[174],"specific":[179,188],"or":[181],"functional":[182],"classes,":[183],"quantitative":[191],"structure":[192],"activity":[193],"relationships":[194],"molecules.":[197],"is":[199],"accessible":[200],"free":[201],"charge":[203],"at":[204],"http://bidd.cz3.nus.edu.sg/cgi-bin/prof/protein/profnew.cgi.":[205]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":7},{"year":2024,"cited_by_count":16},{"year":2023,"cited_by_count":14},{"year":2022,"cited_by_count":20},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":22},{"year":2019,"cited_by_count":34},{"year":2018,"cited_by_count":27},{"year":2017,"cited_by_count":24},{"year":2016,"cited_by_count":31},{"year":2015,"cited_by_count":21},{"year":2014,"cited_by_count":29},{"year":2013,"cited_by_count":20},{"year":2012,"cited_by_count":17}],"updated_date":"2026-05-05T08:41:31.759640","created_date":"2025-10-10T00:00:00"}
