{"id":"https://openalex.org/W2086843268","doi":"https://doi.org/10.1093/nar/gkr1188","title":"HGPD: Human Gene and Protein Database, 2012 update","display_name":"HGPD: Human Gene and Protein Database, 2012 update","publication_year":2011,"publication_date":"2011-12-02","ids":{"openalex":"https://openalex.org/W2086843268","doi":"https://doi.org/10.1093/nar/gkr1188","mag":"2086843268","pmid":"https://pubmed.ncbi.nlm.nih.gov/22140100"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr1188","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1188","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D924/9481188/gkr1188.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D924/9481188/gkr1188.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035185063","display_name":"Yukio Maruyama","orcid":"https://orcid.org/0000-0002-5602-8104"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"Y. Maruyama","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology, Japan Biological Informatics Consortium, Aomi, Koto-ku, Tokyo 135-0064, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Japan Biological Informatics Consortium, Aomi, Koto-ku, Tokyo 135-0064, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101774062","display_name":"Yumi Kawamura","orcid":"https://orcid.org/0000-0001-8386-4645"},"institutions":[{"id":"https://openalex.org/I4210104082","display_name":"Japan Biological Informatics Consortium","ror":"https://ror.org/01astg473","country_code":"JP","type":"nonprofit","lineage":["https://openalex.org/I4210104082"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I200641316","display_name":"Musashino University","ror":"https://ror.org/04bcbax71","country_code":"JP","type":"education","lineage":["https://openalex.org/I200641316"]},{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"Y. Kawamura","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","institution_ids":["https://openalex.org/I200641316","https://openalex.org/I4210104082","https://openalex.org/I65143321","https://openalex.org/I74801974","https://openalex.org/I73613424"]},{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan","institution_ids":["https://openalex.org/I73613424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101944389","display_name":"Takeshi Nishikawa","orcid":"https://orcid.org/0000-0003-0698-5755"},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I200641316","display_name":"Musashino University","ror":"https://ror.org/04bcbax71","country_code":"JP","type":"education","lineage":["https://openalex.org/I200641316"]},{"id":"https://openalex.org/I4210104082","display_name":"Japan Biological Informatics Consortium","ror":"https://ror.org/01astg473","country_code":"JP","type":"nonprofit","lineage":["https://openalex.org/I4210104082"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"T. Nishikawa","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","institution_ids":["https://openalex.org/I200641316","https://openalex.org/I4210104082","https://openalex.org/I65143321","https://openalex.org/I74801974","https://openalex.org/I73613424"]},{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan","institution_ids":["https://openalex.org/I73613424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5026453712","display_name":"Takao Isogai","orcid":"https://orcid.org/0000-0002-1970-4556"},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I4210104082","display_name":"Japan Biological Informatics Consortium","ror":"https://ror.org/01astg473","country_code":"JP","type":"nonprofit","lineage":["https://openalex.org/I4210104082"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]},{"id":"https://openalex.org/I200641316","display_name":"Musashino University","ror":"https://ror.org/04bcbax71","country_code":"JP","type":"education","lineage":["https://openalex.org/I200641316"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"T. Isogai","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","institution_ids":["https://openalex.org/I200641316","https://openalex.org/I4210104082","https://openalex.org/I65143321","https://openalex.org/I74801974","https://openalex.org/I73613424"]},{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan","institution_ids":["https://openalex.org/I73613424"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037252505","display_name":"Nobuhiko Nomura","orcid":"https://orcid.org/0000-0003-1103-9157"},"institutions":[{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]},{"id":"https://openalex.org/I200641316","display_name":"Musashino University","ror":"https://ror.org/04bcbax71","country_code":"JP","type":"education","lineage":["https://openalex.org/I200641316"]},{"id":"https://openalex.org/I4210104082","display_name":"Japan Biological Informatics Consortium","ror":"https://ror.org/01astg473","country_code":"JP","type":"nonprofit","lineage":["https://openalex.org/I4210104082"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"N. Nomura","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","institution_ids":["https://openalex.org/I200641316","https://openalex.org/I4210104082","https://openalex.org/I65143321","https://openalex.org/I74801974","https://openalex.org/I73613424"]},{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan","institution_ids":["https://openalex.org/I73613424"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5055875696","display_name":"Naoki Goshima","orcid":"https://orcid.org/0000-0001-6664-6363"},"institutions":[{"id":"https://openalex.org/I4210104082","display_name":"Japan Biological Informatics Consortium","ror":"https://ror.org/01astg473","country_code":"JP","type":"nonprofit","lineage":["https://openalex.org/I4210104082"]},{"id":"https://openalex.org/I74801974","display_name":"The University of Tokyo","ror":"https://ror.org/057zh3y96","country_code":"JP","type":"education","lineage":["https://openalex.org/I74801974"]},{"id":"https://openalex.org/I65143321","display_name":"Hitachi (Japan)","ror":"https://ror.org/02exqgm79","country_code":"JP","type":"company","lineage":["https://openalex.org/I65143321"]},{"id":"https://openalex.org/I73613424","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54","country_code":"JP","type":"government","lineage":["https://openalex.org/I73613424"]},{"id":"https://openalex.org/I200641316","display_name":"Musashino University","ror":"https://ror.org/04bcbax71","country_code":"JP","type":"education","lineage":["https://openalex.org/I200641316"]}],"countries":["JP"],"is_corresponding":false,"raw_author_name":"N. Goshima","raw_affiliation_strings":["National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan"],"affiliations":[{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology (AIST), 2Japan Biological Informatics Consortium (JBIC), Aomi, Koto-ku, Tokyo 135-0064, 3Life Science Research Laboratory, Central Research Laboratory, Hitachi Ltd, Kokubunji, Tokyo 185-8601, 4Graduate School of Pharmaceutical Sciences, The University of Tokyo, Hongo, Bunkyo-ku, Tokyo 113-0033 and 5Department of Human Studies, Musashino University, Nishi-Tokyo, Tokyo 202-8585, Japan","institution_ids":["https://openalex.org/I200641316","https://openalex.org/I4210104082","https://openalex.org/I65143321","https://openalex.org/I74801974","https://openalex.org/I73613424"]},{"raw_affiliation_string":"National Institute of Advanced Industrial Science and Technology, Tsukuba, Japan","institution_ids":["https://openalex.org/I73613424"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5035185063"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.67714312,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.82102019,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"40","issue":"D1","first_page":"D924","last_page":"D929"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9969000220298767,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.81483393907547},{"id":"https://openalex.org/keywords/gateway","display_name":"Gateway (web page)","score":0.7969313859939575},{"id":"https://openalex.org/keywords/orfs","display_name":"ORFS","score":0.7846002578735352},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5887803435325623},{"id":"https://openalex.org/keywords/proteome","display_name":"Proteome","score":0.5317263603210449},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5013861656188965},{"id":"https://openalex.org/keywords/human-proteome-project","display_name":"Human proteome project","score":0.48287490010261536},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4704153835773468},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.4673953950405121},{"id":"https://openalex.org/keywords/complementary-dna","display_name":"Complementary DNA","score":0.46406206488609314},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4528079032897949},{"id":"https://openalex.org/keywords/human-proteins","display_name":"Human proteins","score":0.42749521136283875},{"id":"https://openalex.org/keywords/function","display_name":"Function (biology)","score":0.4104938507080078},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3247109651565552},{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.2598755359649658},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.17434754967689514},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.1420360803604126},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.12680572271347046}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.81483393907547},{"id":"https://openalex.org/C2777710495","wikidata":"https://www.wikidata.org/wiki/Q5527195","display_name":"Gateway (web page)","level":2,"score":0.7969313859939575},{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.7846002578735352},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5887803435325623},{"id":"https://openalex.org/C104397665","wikidata":"https://www.wikidata.org/wiki/Q860947","display_name":"Proteome","level":2,"score":0.5317263603210449},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5013861656188965},{"id":"https://openalex.org/C94795543","wikidata":"https://www.wikidata.org/wiki/Q3813754","display_name":"Human proteome project","level":4,"score":0.48287490010261536},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4704153835773468},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.4673953950405121},{"id":"https://openalex.org/C187882448","wikidata":"https://www.wikidata.org/wiki/Q283478","display_name":"Complementary DNA","level":3,"score":0.46406206488609314},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4528079032897949},{"id":"https://openalex.org/C2911029443","wikidata":"https://www.wikidata.org/wiki/Q21296145","display_name":"Human proteins","level":3,"score":0.42749521136283875},{"id":"https://openalex.org/C14036430","wikidata":"https://www.wikidata.org/wiki/Q3736076","display_name":"Function (biology)","level":2,"score":0.4104938507080078},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3247109651565552},{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.2598755359649658},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.17434754967689514},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.1420360803604126},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.12680572271347046}],"mesh":[{"descriptor_ui":"D003001","descriptor_name":"Cloning, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004591","descriptor_name":"Electrophoresis, Polyacrylamide Gel","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011993","descriptor_name":"Recombinant Fusion Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D003001","descriptor_name":"Cloning, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004591","descriptor_name":"Electrophoresis, Polyacrylamide Gel","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011993","descriptor_name":"Recombinant Fusion Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D003001","descriptor_name":"Cloning, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004591","descriptor_name":"Electrophoresis, Polyacrylamide Gel","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D008164","descriptor_name":"Luminescent Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D016366","descriptor_name":"Open Reading Frames","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011993","descriptor_name":"Recombinant Fusion Proteins","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkr1188","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1188","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D924/9481188/gkr1188.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22140100","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22140100","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D924","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D924","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245012","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245012","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr1188","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1188","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D924/9481188/gkr1188.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.44999998807907104,"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320311508","display_name":"National Institute of Advanced Industrial Science and Technology","ror":"https://ror.org/01703db54"},{"id":"https://openalex.org/F4320338078","display_name":"National Bioscience Database Center","ror":"https://ror.org/00097mb19"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2086843268.pdf","grobid_xml":"https://content.openalex.org/works/W2086843268.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1985340676","https://openalex.org/W1986508375","https://openalex.org/W1994450611","https://openalex.org/W2023994677","https://openalex.org/W2026726511","https://openalex.org/W2051533377","https://openalex.org/W2099275700","https://openalex.org/W2106291043","https://openalex.org/W2109432249","https://openalex.org/W2121553505","https://openalex.org/W2121639904","https://openalex.org/W2138197117","https://openalex.org/W2145276133","https://openalex.org/W2145708088","https://openalex.org/W2146415652","https://openalex.org/W2153875468","https://openalex.org/W4292410652"],"related_works":["https://openalex.org/W2054914913","https://openalex.org/W2971297443","https://openalex.org/W2498907773","https://openalex.org/W2074599985","https://openalex.org/W2042219189","https://openalex.org/W1987905608","https://openalex.org/W2117063418","https://openalex.org/W2029933062","https://openalex.org/W2580329791","https://openalex.org/W2091106247"],"abstract_inverted_index":{"The":[0,32],"Human":[1,130],"Gene":[2],"and":[3,28,39,76,83,90],"Protein":[4],"Database":[5],"(HGPD;":[6],"http://www.HGPD.jp/)":[7],"is":[8,187],"a":[9,16,116],"unique":[10],"database":[11],"that":[12],"stores":[13],"information":[14],"on":[15,70],"set":[17,121],"of":[18,54,73,79,118,122,158,184],"human":[19,41,111,123,162],"Gateway":[20,42,112,124,163,192],"entry":[21,43,113,125,164,193],"clones":[22,44,126,144,165,194],"in":[23,36,62,153],"addition":[24],"to":[25,97,149,195],"protein":[26,29,91,150],"expression":[27],"synthesis":[30],"data.":[31],"HGPD":[33],"was":[34,127],"launched":[35],"November":[37],"2008,":[38],"33,275":[40],"have":[45,68,100],"been":[46,101],"constructed":[47,107],"from":[48,170],"the":[49,59,63,71,77,129,136,143,171,178,181,191],"open":[50],"reading":[51],"frames":[52],"(ORFs)":[53],"full-length":[55],"cDNA,":[56],"thus":[57],"representing":[58],"largest":[60],"collection":[61],"world.":[64],"Recently,":[65],"research":[66],"objectives":[67],"focused":[69],"development":[72],"new":[74],"medicines":[75],"establishment":[78],"novel":[80],"diagnostic":[81],"methods":[82],"medical":[84],"treatments.":[85],"And,":[86],"studies":[87],"using":[88],"proteins":[89,159],"information,":[92],"which":[93,176],"are":[94],"closely":[95],"related":[96],"gene":[98],"function,":[99],"undertaken.":[102],"For":[103],"this":[104],"update,":[105],"we":[106,140],"an":[108],"additional":[109],"9974":[110],"clones,":[114],"giving":[115],"total":[117],"43,249.":[119],"This":[120],"named":[128],"Proteome":[131],"Expression":[132],"Resource,":[133],"known":[134],"as":[135],"'HuPEX'.":[137],"In":[138,173],"addition,":[139],"also":[141],"classified":[142],"into":[145],"10":[146],"groups":[147],"according":[148],"function.":[151],"Moreover,":[152],"vivo":[154],"cellular":[155],"localization":[156],"data":[157],"for":[160,168],"32,651":[161],"were":[166],"included":[167],"retrieval":[169],"HGPD.":[172],"'Information":[174],"Overview',":[175],"presents":[177],"search":[179],"results,":[180],"ORF":[182],"region":[183],"each":[185],"cDNA":[186],"now":[188],"displayed":[189],"allowing":[190],"be":[196],"searched":[197],"more":[198],"easily.":[199]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":4}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
