{"id":"https://openalex.org/W2035575075","doi":"https://doi.org/10.1093/nar/gkr1177","title":"MOPED: Model Organism Protein Expression Database","display_name":"MOPED: Model Organism Protein Expression Database","publication_year":2011,"publication_date":"2011-12-01","ids":{"openalex":"https://openalex.org/W2035575075","doi":"https://doi.org/10.1093/nar/gkr1177","mag":"2035575075","pmid":"https://pubmed.ncbi.nlm.nih.gov/22139914"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr1177","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1177","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1093/16955360/gkr1177.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1093/16955360/gkr1177.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087861388","display_name":"Eugene Kolker","orcid":null},"institutions":[{"id":"https://openalex.org/I4210151837","display_name":"High Throughput Biology (United States)","ror":"https://ror.org/05h1bjp83","country_code":"US","type":"company","lineage":["https://openalex.org/I4210151837"]},{"id":"https://openalex.org/I4210109034","display_name":"Seattle Children's Hospital","ror":null,"country_code":"US","type":null,"lineage":["https://openalex.org/I4210109034"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Eugene Kolker","raw_affiliation_strings":["Bioinformatics and High-throughput Analysis Laboratory, High-throughput Analysis Core, Center for Developmental Therapeutics, Seattle Children's Research Institute, Predicitive Analytics, Seattle Children's Hospital, Seattle, WA 98105, USA. eugene.kolker@seattlechildrens.org","University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"Bioinformatics and High-throughput Analysis Laboratory, High-throughput Analysis Core, Center for Developmental Therapeutics, Seattle Children's Research Institute, Predicitive Analytics, Seattle Children's Hospital, Seattle, WA 98105, USA. eugene.kolker@seattlechildrens.org","institution_ids":["https://openalex.org/I4210109034","https://openalex.org/I4210151837"]},{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108222756","display_name":"Roger Higdon","orcid":null},"institutions":[{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Roger Higdon","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022202018","display_name":"Winston Haynes","orcid":"https://orcid.org/0000-0002-2376-0630"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Winston Haynes","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067141744","display_name":"Dean Welch","orcid":null},"institutions":[{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Dean Welch","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056533315","display_name":"William Broomall","orcid":null},"institutions":[{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"William Broomall","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059866150","display_name":"Doron Lancet","orcid":"https://orcid.org/0000-0001-5424-1393"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Doron Lancet","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068385320","display_name":"Larissa Stanberry","orcid":"https://orcid.org/0000-0002-2388-0640"},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Larissa Stanberry","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026653925","display_name":"Natali Kolker","orcid":null},"institutions":[{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I58610484","display_name":"Seattle University","ror":"https://ror.org/02jqc0m91","country_code":"US","type":"education","lineage":["https://openalex.org/I58610484"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Natali Kolker","raw_affiliation_strings":["University of Washington, Seattle, United States"],"affiliations":[{"raw_affiliation_string":"University of Washington, Seattle, United States","institution_ids":["https://openalex.org/I58610484","https://openalex.org/I201448701"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5087861388"],"corresponding_institution_ids":["https://openalex.org/I201448701","https://openalex.org/I4210109034","https://openalex.org/I4210151837","https://openalex.org/I58610484"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.7246,"has_fulltext":false,"cited_by_count":115,"citation_normalized_percentile":{"value":0.98609094,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D1093","last_page":"D1099"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10519","display_name":"Advanced Proteomics Techniques and Applications","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1607","display_name":"Spectroscopy"},"field":{"id":"https://openalex.org/fields/16","display_name":"Chemistry"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9965999722480774,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/proteomics","display_name":"Proteomics","score":0.7092870473861694},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6478549838066101},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.6453285813331604},{"id":"https://openalex.org/keywords/model-organism","display_name":"Model organism","score":0.5783612132072449},{"id":"https://openalex.org/keywords/uniprot","display_name":"UniProt","score":0.5613608956336975},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.5514258146286011},{"id":"https://openalex.org/keywords/protein-expression","display_name":"Protein expression","score":0.5458893179893494},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5249152779579163},{"id":"https://openalex.org/keywords/expression","display_name":"Expression (computer science)","score":0.41896897554397583},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3603334128856659},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35096365213394165},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.33605313301086426},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.14048126339912415},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.13020187616348267},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.08405667543411255},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.0832756757736206}],"concepts":[{"id":"https://openalex.org/C46111723","wikidata":"https://www.wikidata.org/wiki/Q471857","display_name":"Proteomics","level":3,"score":0.7092870473861694},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6478549838066101},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.6453285813331604},{"id":"https://openalex.org/C19843653","wikidata":"https://www.wikidata.org/wiki/Q213907","display_name":"Model organism","level":3,"score":0.5783612132072449},{"id":"https://openalex.org/C202264299","wikidata":"https://www.wikidata.org/wiki/Q905695","display_name":"UniProt","level":3,"score":0.5613608956336975},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.5514258146286011},{"id":"https://openalex.org/C6856738","wikidata":"https://www.wikidata.org/wiki/Q331672","display_name":"Protein expression","level":3,"score":0.5458893179893494},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5249152779579163},{"id":"https://openalex.org/C90559484","wikidata":"https://www.wikidata.org/wiki/Q778379","display_name":"Expression (computer science)","level":2,"score":0.41896897554397583},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3603334128856659},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35096365213394165},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.33605313301086426},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.14048126339912415},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.13020187616348267},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.08405667543411255},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0832756757736206},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013058","descriptor_name":"Mass Spectrometry","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023421","descriptor_name":"Models, Animal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023421","descriptor_name":"Models, Animal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023421","descriptor_name":"Models, Animal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023421","descriptor_name":"Models, Animal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023421","descriptor_name":"Models, Animal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkr1177","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1177","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1093/16955360/gkr1177.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22139914","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22139914","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3245040","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245040","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.911.2765","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.911.2765","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/40/D1/D1093.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.919.1953","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.919.1953","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2011/12/01/nar.gkr1177.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.928.610","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.928.610","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://europepmc.org/backend/ptpmcrender.fcgi?accid%3DPMC3245040%26blobtype%3Dpdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D1093","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D1093","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr1177","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1177","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D1093/16955360/gkr1177.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2035575075.pdf","grobid_xml":"https://content.openalex.org/works/W2035575075.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1606232948","https://openalex.org/W1757909678","https://openalex.org/W1963739719","https://openalex.org/W1966792579","https://openalex.org/W1968436111","https://openalex.org/W1981194976","https://openalex.org/W1981593008","https://openalex.org/W1997504014","https://openalex.org/W2014328430","https://openalex.org/W2015556811","https://openalex.org/W2023096047","https://openalex.org/W2026465178","https://openalex.org/W2028133290","https://openalex.org/W2028567538","https://openalex.org/W2031095666","https://openalex.org/W2047275456","https://openalex.org/W2052087727","https://openalex.org/W2082006641","https://openalex.org/W2094678200","https://openalex.org/W2096057003","https://openalex.org/W2096525273","https://openalex.org/W2104764521","https://openalex.org/W2108366237","https://openalex.org/W2112078820","https://openalex.org/W2112466127","https://openalex.org/W2114034054","https://openalex.org/W2117327695","https://openalex.org/W2120428260","https://openalex.org/W2127660113","https://openalex.org/W2128386749","https://openalex.org/W2128601422","https://openalex.org/W2131894683","https://openalex.org/W2146980885","https://openalex.org/W2150818376","https://openalex.org/W2155142785","https://openalex.org/W2158826543","https://openalex.org/W2159874791","https://openalex.org/W2159941448","https://openalex.org/W2167933222","https://openalex.org/W2171437346","https://openalex.org/W2330153197","https://openalex.org/W2612240612","https://openalex.org/W4233060585","https://openalex.org/W4244606935"],"related_works":["https://openalex.org/W4223896405","https://openalex.org/W2059629050","https://openalex.org/W2258998699","https://openalex.org/W3013644380","https://openalex.org/W2074740504","https://openalex.org/W1996935079","https://openalex.org/W3210243923","https://openalex.org/W2145833061","https://openalex.org/W3184867568","https://openalex.org/W1998405066"],"abstract_inverted_index":{"Large":[0],"numbers":[1],"of":[2,14,21,54,76,156],"mass":[3],"spectrometry":[4],"proteomics":[5,22,48,77],"studies":[6,61],"are":[7],"being":[8],"conducted":[9],"to":[10,26,70,125,140],"understand":[11],"all":[12],"types":[13],"biological":[15],"processes.":[16],"The":[17,35,153],"size":[18],"and":[19,31,46,64,74,93,112,114,120,131,143,151,168],"complexity":[20],"data":[23,78,95,130],"hinders":[24],"efforts":[25],"easily":[27],"share,":[28],"integrate,":[29],"query":[30],"compare":[32,132],"the":[33,72,80],"studies.":[34,136],"Model":[36],"Organism":[37],"Protein":[38],"Expression":[39],"Database":[40],"(MOPED,":[41],"htttp://moped.proteinspire.org)":[42],"is":[43,68],"a":[44],"new":[45],"expanding":[47],"resource":[49],"that":[50],"enables":[51],"rapid":[52],"browsing":[53],"protein":[55,87,142],"expression":[56,89,129],"information":[57],"from":[58,96],"publicly":[59],"available":[60],"on":[62,108],"humans":[63],"model":[65],"organisms.":[66],"MOPED":[67,84,122,138,157],"designed":[69],"simplify":[71],"comparison":[73],"sharing":[75],"for":[79,103],"greater":[81],"research":[82],"community.":[83],"uniquely":[85],"provides":[86],"level":[88],"data,":[90],"meta-analysis":[91],"capabilities":[92],"quantitative":[94],"standardized":[97],"analysis.":[98],"Data":[99],"can":[100],"be":[101],"queried":[102],"specific":[104],"proteins,":[105],"browsed":[106],"based":[107],"organism,":[109],"tissue,":[110],"localization":[111],"condition":[113],"sorted":[115],"by":[116],"false":[117],"discovery":[118],"rate":[119],"expression.":[121],"empowers":[123],"users":[124],"visualize":[126],"their":[127],"own":[128],"it":[133],"with":[134,162],"existing":[135],"Further,":[137],"links":[139],"various":[141],"pathway":[144],"databases,":[145],"including":[146],"GeneCards,":[147],"Entrez,":[148],"UniProt,":[149],"KEGG":[150],"Reactome.":[152],"current":[154],"version":[155],"contains":[158],"over":[159],"43,000":[160],"proteins":[161],"at":[163],"least":[164],"one":[165],"spectral":[166],"match":[167],"more":[169],"than":[170],"11":[171],"million":[172],"high":[173],"certainty":[174],"spectra.":[175]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":5},{"year":2019,"cited_by_count":6},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":12},{"year":2015,"cited_by_count":16},{"year":2014,"cited_by_count":28},{"year":2013,"cited_by_count":16},{"year":2012,"cited_by_count":9}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}