{"id":"https://openalex.org/W2021825126","doi":"https://doi.org/10.1093/nar/gkr1105","title":"BacMap: an up-to-date electronic atlas of annotated bacterial genomes","display_name":"BacMap: an up-to-date electronic atlas of annotated bacterial genomes","publication_year":2011,"publication_date":"2011-12-01","ids":{"openalex":"https://openalex.org/W2021825126","doi":"https://doi.org/10.1093/nar/gkr1105","mag":"2021825126","pmid":"https://pubmed.ncbi.nlm.nih.gov/22135301"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr1105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1105","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D599/9478888/gkr1105.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D599/9478888/gkr1105.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109719608","display_name":"J. Cruz","orcid":null},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"J. Cruz","raw_affiliation_strings":["Department of Computing Science, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8","institution_ids":["https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017815011","display_name":"Youhua Liu","orcid":"https://orcid.org/0000-0002-4740-805X"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Y. Liu","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066819567","display_name":"Yong Liang","orcid":"https://orcid.org/0000-0002-3702-3113"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Y. Liang","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103164646","display_name":"Yuxun Zhou","orcid":"https://orcid.org/0000-0001-5531-8612"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Y. Zhou","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074143910","display_name":"Michael Wilson","orcid":"https://orcid.org/0000-0001-5892-6074"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"M. Wilson","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5077747318","display_name":"Jonathan J. Dennis","orcid":"https://orcid.org/0000-0002-3925-9533"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"J. J. Dennis","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5059930476","display_name":"Paul Stothard","orcid":"https://orcid.org/0000-0003-4263-969X"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"P. Stothard","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008793716","display_name":"Gary Van Domselaar","orcid":"https://orcid.org/0000-0003-1139-4458"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"G. Van Domselaar","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5003573061","display_name":"David S. Wishart","orcid":"https://orcid.org/0000-0002-3207-2434"},"institutions":[{"id":"https://openalex.org/I154425047","display_name":"University of Alberta","ror":"https://ror.org/0160cpw27","country_code":"CA","type":"education","lineage":["https://openalex.org/I154425047"]},{"id":"https://openalex.org/I177235860","display_name":"Public Health Agency of Canada","ror":"https://ror.org/023xf2a37","country_code":"CA","type":"government","lineage":["https://openalex.org/I1288894424","https://openalex.org/I177235860"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"D. S. Wishart","raw_affiliation_strings":["Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","Public Health Agency of Canada, Ottawa, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computing Science, 2Department of Biological Sciences, 3Department of Agricultural, Food and Nutritional Science, University of Alberta, Edmonton, AB, Canada T6G 2E8 and 4National Microbiology Laboratory\u2014Public Health Agency of Canada, 1015 Arlington Street, Winnipeg, MB, Canada R3E 3R2","institution_ids":["https://openalex.org/I177235860","https://openalex.org/I154425047"]},{"raw_affiliation_string":"Public Health Agency of Canada, Ottawa, Canada","institution_ids":["https://openalex.org/I177235860"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":9,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.5323,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.65334236,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"40","issue":"D1","first_page":"D599","last_page":"D604"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.96670001745224,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8428263664245605},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.706551194190979},{"id":"https://openalex.org/keywords/prophage","display_name":"Prophage","score":0.6857268810272217},{"id":"https://openalex.org/keywords/bacterial-genome-size","display_name":"Bacterial genome size","score":0.6676883101463318},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5930385589599609},{"id":"https://openalex.org/keywords/circular-bacterial-chromosome","display_name":"Circular bacterial chromosome","score":0.55865877866745},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5169143676757812},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.5109807252883911},{"id":"https://openalex.org/keywords/bacterial-artificial-chromosome","display_name":"Bacterial artificial chromosome","score":0.5085417032241821},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.40029874444007874},{"id":"https://openalex.org/keywords/escherichia-coli","display_name":"Escherichia coli","score":0.12079739570617676},{"id":"https://openalex.org/keywords/bacteriophage","display_name":"Bacteriophage","score":0.08431324362754822}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8428263664245605},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.706551194190979},{"id":"https://openalex.org/C73445445","wikidata":"https://www.wikidata.org/wiki/Q1712327","display_name":"Prophage","level":5,"score":0.6857268810272217},{"id":"https://openalex.org/C3742359","wikidata":"https://www.wikidata.org/wiki/Q4839988","display_name":"Bacterial genome size","level":4,"score":0.6676883101463318},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5930385589599609},{"id":"https://openalex.org/C58167604","wikidata":"https://www.wikidata.org/wiki/Q5121654","display_name":"Circular bacterial chromosome","level":4,"score":0.55865877866745},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5169143676757812},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.5109807252883911},{"id":"https://openalex.org/C182901222","wikidata":"https://www.wikidata.org/wiki/Q419061","display_name":"Bacterial artificial chromosome","level":4,"score":0.5085417032241821},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.40029874444007874},{"id":"https://openalex.org/C547475151","wikidata":"https://www.wikidata.org/wiki/Q25419","display_name":"Escherichia coli","level":3,"score":0.12079739570617676},{"id":"https://openalex.org/C2776441376","wikidata":"https://www.wikidata.org/wiki/Q165028","display_name":"Bacteriophage","level":4,"score":0.08431324362754822}],"mesh":[{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D001271","descriptor_name":"Atlases as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002874","descriptor_name":"Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkr1105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1105","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D599/9478888/gkr1105.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22135301","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22135301","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D599","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D599","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245156","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245156","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"doi:10.25504/fairsharing.z6rbe3","is_oa":true,"landing_page_url":"https://doi.org/10.25504/fairsharing.z6rbe3","pdf_url":null,"source":{"id":"https://openalex.org/S7407053452","display_name":"FAIRsharing.org","issn_l":null,"issn":[],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"dataset"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr1105","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1105","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D599/9478888/gkr1105.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","display_name":"Life in Land","score":0.4699999988079071}],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2021825126.pdf","grobid_xml":"https://content.openalex.org/works/W2021825126.grobid-xml"},"referenced_works_count":24,"referenced_works":["https://openalex.org/W83855287","https://openalex.org/W102900600","https://openalex.org/W1490137556","https://openalex.org/W1971403296","https://openalex.org/W1984345785","https://openalex.org/W2021825126","https://openalex.org/W2085836956","https://openalex.org/W2090242275","https://openalex.org/W2100363512","https://openalex.org/W2121703775","https://openalex.org/W2122613768","https://openalex.org/W2128601422","https://openalex.org/W2130956021","https://openalex.org/W2141133802","https://openalex.org/W2145514756","https://openalex.org/W2149429041","https://openalex.org/W2153100136","https://openalex.org/W2153717161","https://openalex.org/W2157748357","https://openalex.org/W2158714788","https://openalex.org/W2158804744","https://openalex.org/W2171437346","https://openalex.org/W4210450218","https://openalex.org/W4230606671"],"related_works":["https://openalex.org/W2079934389","https://openalex.org/W4366771508","https://openalex.org/W2283056165","https://openalex.org/W2990021576","https://openalex.org/W1123777192","https://openalex.org/W2156911394","https://openalex.org/W1465302203","https://openalex.org/W2135614314","https://openalex.org/W4285308706","https://openalex.org/W4280505504"],"abstract_inverted_index":{"Originally":[0],"released":[1],"in":[2,109],"2005,":[3],"BacMap":[4,59,110],"is":[5,47],"an":[6],"electronic,":[7],"interactive":[8],"atlas":[9],"of":[10,41,58,119,163],"fully":[11,17],"sequenced":[12,27],"bacterial":[13,68,86,106,126,131],"genomes.":[14],"It":[15],"contains":[16,62,112,129],"labeled,":[18],"zoomable":[19],"and":[20,30,44,82,102,114,121,141,148,161,167],"searchable":[21],"chromosome":[22,81,107,165],"maps":[23,88,96,166],"for":[24,64],"essentially":[25],"all":[26],"prokaryotic":[28],"(archaebacterial":[29],"eubacterial)":[31],"species.":[32],"Each":[33,105],"map":[34],"can":[35],"be":[36],"zoomed":[37],"to":[38,49,77,155],"the":[39,73,164],"level":[40],"individual":[42],"genes":[43],"each":[45],"gene":[46,53,120],"hyperlinked":[48],"a":[50,117,130],"richly":[51],"annotated":[52],"card.":[54],"The":[55],"latest":[56],"release":[57],"(http://bacmap.wishartlab.com/)":[60],"now":[61,90],"data":[63,146],"more":[65,71,78,157],"than":[66,72,79],"1700":[67],"species":[69,127],"(~10\u00d7":[70],"2005":[74],"release),":[75],"corresponding":[76],"2800":[80],"plasmid":[83],"maps.":[84,104],"All":[85],"genome":[87,95],"are":[89],"supplemented":[91],"with":[92,134],"separate":[93,100],"prophage":[94],"as":[97,99],"well":[98],"tRNA":[101],"rRNA":[103],"entry":[108,128],"also":[111,152],"graphs":[113],"tables":[115],"on":[116],"variety":[118],"protein":[122],"statistics.":[123],"Likewise,":[124],"every":[125],"'biography'":[132],"card,":[133],"taxonomic":[135],"details,":[136,138],"phenotypic":[137],"textual":[139],"descriptions":[140],"images":[142],"(when":[143],"available).":[144],"Improved":[145],"browsing":[147],"searching":[149],"tools":[150],"have":[151],"been":[153],"added":[154],"allow":[156],"facile":[158],"filtering,":[159],"sorting":[160],"display":[162],"their":[168],"contents.":[169]},"counts_by_year":[{"year":2025,"cited_by_count":4},{"year":2024,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":9},{"year":2019,"cited_by_count":4},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":3},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":2}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2016-06-24T00:00:00"}
