{"id":"https://openalex.org/W2133445706","doi":"https://doi.org/10.1093/nar/gkr1061","title":"Mouse Phenome Database (MPD)","display_name":"Mouse Phenome Database (MPD)","publication_year":2011,"publication_date":"2011-11-17","ids":{"openalex":"https://openalex.org/W2133445706","doi":"https://doi.org/10.1093/nar/gkr1061","mag":"2133445706","pmid":"https://pubmed.ncbi.nlm.nih.gov/22102583"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1061","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D887/16954477/gkr1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D887/16954477/gkr1061.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5073033068","display_name":"Terry P. Maddatu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Terry P. Maddatu","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056614962","display_name":"Stephen C. Grubb","orcid":"https://orcid.org/0000-0002-4708-3363"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Stephen C. Grubb","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028990206","display_name":"Carol J. Bult","orcid":"https://orcid.org/0000-0001-9433-210X"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Carol J. Bult","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5019090106","display_name":"Molly A. Bogue","orcid":"https://orcid.org/0000-0001-6624-9261"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Molly A. Bogue","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5073033068"],"corresponding_institution_ids":["https://openalex.org/I4210115256"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.2696,"has_fulltext":false,"cited_by_count":142,"citation_normalized_percentile":{"value":0.97459665,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D887","last_page":"D894"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10836","display_name":"Metabolomics and Mass Spectrometry Studies","score":0.996399998664856,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9858999848365784,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.980400025844574,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9311397075653076},{"id":"https://openalex.org/keywords/phenome","display_name":"Phenome","score":0.8046774864196777},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.37672656774520874},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.35943835973739624},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2636629045009613},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.12065741419792175},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08357185125350952},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.07552707195281982}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9311397075653076},{"id":"https://openalex.org/C7952369","wikidata":"https://www.wikidata.org/wiki/Q844116","display_name":"Phenome","level":4,"score":0.8046774864196777},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.37672656774520874},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.35943835973739624},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2636629045009613},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.12065741419792175},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08357185125350952},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.07552707195281982}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005260","descriptor_name":"Female","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005838","descriptor_name":"Genotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008297","descriptor_name":"Male","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056726","descriptor_name":"Genetic Association Studies","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkr1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1061","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D887/16954477/gkr1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22102583","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22102583","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:mouseion.jax.org:stfb2012-1107","is_oa":false,"landing_page_url":"https://mouseion.jax.org/stfb2012/109","pdf_url":null,"source":{"id":"https://openalex.org/S4377196421","display_name":"The Mouseion at the JAXlibrary (Jackson Laboratory)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I4210115256","host_organization_name":"Jackson Laboratory","host_organization_lineage":["https://openalex.org/I4210115256"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Faculty Research 2012","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D887","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D887","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245053","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245053","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr1061","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1061","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D887/16954477/gkr1061.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Good health and well-being","score":0.6200000047683716,"id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2133445706.pdf","grobid_xml":"https://content.openalex.org/works/W2133445706.grobid-xml"},"referenced_works_count":39,"referenced_works":["https://openalex.org/W1685382538","https://openalex.org/W1702002942","https://openalex.org/W1965606192","https://openalex.org/W1967973651","https://openalex.org/W1971836750","https://openalex.org/W2000941677","https://openalex.org/W2005501593","https://openalex.org/W2020713314","https://openalex.org/W2020901813","https://openalex.org/W2031865824","https://openalex.org/W2050499823","https://openalex.org/W2050892140","https://openalex.org/W2053352399","https://openalex.org/W2057960967","https://openalex.org/W2062393578","https://openalex.org/W2073445330","https://openalex.org/W2075563480","https://openalex.org/W2087136216","https://openalex.org/W2090262690","https://openalex.org/W2094909314","https://openalex.org/W2096522979","https://openalex.org/W2096525273","https://openalex.org/W2098257696","https://openalex.org/W2100013324","https://openalex.org/W2106015069","https://openalex.org/W2116575348","https://openalex.org/W2127684760","https://openalex.org/W2138163973","https://openalex.org/W2138296219","https://openalex.org/W2141674000","https://openalex.org/W2155503913","https://openalex.org/W2156285456","https://openalex.org/W2160896286","https://openalex.org/W2168433590","https://openalex.org/W4210450218","https://openalex.org/W4210580032","https://openalex.org/W4239641275","https://openalex.org/W4244606935","https://openalex.org/W6665994679"],"related_works":["https://openalex.org/W2086237400","https://openalex.org/W2274048411","https://openalex.org/W2082860237","https://openalex.org/W4282960395","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W3212460220"],"abstract_inverted_index":{"The":[0],"Mouse":[1,33],"Phenome":[2,34],"Project":[3],"was":[4],"launched":[5],"a":[6,28,40,84,103,130],"decade":[7],"ago":[8],"to":[9,46,162],"complement":[10],"mouse":[11,53,115],"genome":[12],"sequencing":[13],"efforts":[14],"by":[15,81,95],"promoting":[16],"new":[17,158,174],"phenotyping":[18],"initiatives":[19],"under":[20],"standardized":[21,107,131],"conditions":[22],"and":[23,60,88,126,137,145,160,165,178],"collecting":[24],"the":[25,32,48,51,155,171],"data":[26,45,109,122,166,175],"in":[27,54,67,91,113],"central":[29],"public":[30,99],"database,":[31],"Database":[35],"(MPD;":[36],"http://phenome.jax.org).":[37],"MPD":[38,96,101,143],"houses":[39,120],"wealth":[41],"of":[42,50,86,106,157,173],"strain":[43],"characteristics":[44],"facilitate":[47,163],"use":[49],"laboratory":[52],"translational":[55],"research":[56,118],"for":[57,117,123,133,140],"human":[58],"health":[59],"disease,":[61],"helping":[62],"alleviate":[63],"problems":[64],"involving":[65],"experimentation":[66],"humans":[68],"that":[69,110],"cannot":[70],"be":[71],"done":[72],"practically":[73],"or":[74,90],"ethically.":[75],"Data":[76],"sets":[77],"are":[78,152],"voluntarily":[79],"contributed":[80],"researchers":[82],"from":[83,98],"variety":[85],"institutions":[87],"settings,":[89],"some":[92],"cases,":[93],"retrieved":[94],"staff":[97],"sources.":[100],"maintains":[102],"growing":[104],"collection":[105],"reference":[108],"assists":[111],"investigators":[112],"selecting":[114],"strains":[116],"applications;":[119],"treatment/control":[121],"drug":[124],"studies":[125],"other":[127],"interventions;":[128],"offers":[129],"platform":[132],"discovering":[134],"genotype-phenotype":[135],"relationships;":[136],"provides":[138],"tools":[139,159],"hypothesis":[141],"testing.":[142],"improvements":[144],"updates":[146],"since":[147],"our":[148],"last":[149],"NAR":[150],"report":[151],"presented,":[153],"including":[154],"addition":[156],"features":[161],"navigation":[164],"mining":[167],"as":[168,170],"well":[169],"acquisition":[172],"(phenotypic,":[176],"genotypic":[177],"gene":[179],"expression).":[180]},"counts_by_year":[{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":15},{"year":2013,"cited_by_count":14},{"year":2012,"cited_by_count":13}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
