{"id":"https://openalex.org/W2097107919","doi":"https://doi.org/10.1093/nar/gkr1044","title":"IMG: the integrated microbial genomes database and comparative analysis system","display_name":"IMG: the integrated microbial genomes database and comparative analysis system","publication_year":2011,"publication_date":"2011-12-22","ids":{"openalex":"https://openalex.org/W2097107919","doi":"https://doi.org/10.1093/nar/gkr1044","mag":"2097107919","pmid":"https://pubmed.ncbi.nlm.nih.gov/22194640"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkr1044","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1044","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D115/9475546/gkr1044.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/40/D1/D115/9475546/gkr1044.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5079693902","display_name":"Victor Markowitz","orcid":null},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"V. M. Markowitz","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA. VMMarkowitz@lbl.gov","Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA. VMMarkowitz@lbl.gov","institution_ids":["https://openalex.org/I148283060"]},{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, USA","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5104041740","display_name":"I.-M. A. Chen","orcid":null},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I.-M. A. Chen","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038974860","display_name":"Krishna Palaniappan","orcid":"https://orcid.org/0000-0003-4484-7505"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Palaniappan","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110782493","display_name":"K. Y. Chu","orcid":null},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Chu","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017958076","display_name":"Ernest Szeto","orcid":null},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. Szeto","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037136793","display_name":"Yuri Grechkin","orcid":null},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Grechkin","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017035262","display_name":"\u0410. \u0412. \u0420\u0430\u0442\u043d\u0435\u0440","orcid":"https://orcid.org/0000-0001-7173-5328"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Ratner","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005397644","display_name":"Breno Pinheiro Jacob","orcid":"https://orcid.org/0000-0001-9446-1825"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Jacob","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5103156781","display_name":"Jinghua Huang","orcid":"https://orcid.org/0000-0003-4618-0249"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Huang","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047930678","display_name":"Philip G. Williams","orcid":"https://orcid.org/0000-0001-8987-0683"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Williams","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016953798","display_name":"Marcel Huntemann","orcid":"https://orcid.org/0000-0002-1284-3748"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Huntemann","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061764240","display_name":"Iain A. Anderson","orcid":"https://orcid.org/0000-0003-4698-7317"},"institutions":[{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I. Anderson","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110267591","display_name":"Konstantinos Mavromatis","orcid":null},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Mavromatis","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085966412","display_name":"Natalia Ivanova","orcid":"https://orcid.org/0000-0002-5802-9485"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N. N. Ivanova","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5023696415","display_name":"Nikos C. Kyrpides","orcid":"https://orcid.org/0000-0002-6131-0462"},"institutions":[{"id":"https://openalex.org/I148283060","display_name":"Lawrence Berkeley National Laboratory","ror":"https://ror.org/02jbv0t02","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I39565521"]},{"id":"https://openalex.org/I196679689","display_name":"Joint Genome Institute","ror":"https://ror.org/04xm1d337","country_code":"US","type":"facility","lineage":["https://openalex.org/I1330989302","https://openalex.org/I148283060","https://openalex.org/I196679689","https://openalex.org/I39565521"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N. C. Kyrpides","raw_affiliation_strings":["Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA"],"affiliations":[{"raw_affiliation_string":"Biological Data Management and Technology Center, Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley and 2Microbial Genomics and Metagenomics Program, Department of Energy Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, USA","institution_ids":["https://openalex.org/I196679689","https://openalex.org/I148283060"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":15,"corresponding_author_ids":["https://openalex.org/A5079693902"],"corresponding_institution_ids":["https://openalex.org/I148283060"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":38.418,"has_fulltext":false,"cited_by_count":1361,"citation_normalized_percentile":{"value":0.99898343,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"40","issue":"D1","first_page":"D115","last_page":"D122"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11048","display_name":"Bacteriophages and microbial interactions","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9828000068664551,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/img","display_name":"IMG","score":0.9753563404083252},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7285965085029602},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6610581874847412},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.6510221362113953},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.45325830578804016},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.34751635789871216},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2990338206291199},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.2241174876689911},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.19453170895576477}],"concepts":[{"id":"https://openalex.org/C126249665","wikidata":"https://www.wikidata.org/wiki/Q3146723","display_name":"IMG","level":2,"score":0.9753563404083252},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7285965085029602},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6610581874847412},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.6510221362113953},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.45325830578804016},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.34751635789871216},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2990338206291199},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.2241174876689911},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.19453170895576477},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010957","descriptor_name":"Plasmids","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016679","descriptor_name":"Genome, Viral","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040901","descriptor_name":"Proteomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D056890","descriptor_name":"Eukaryota","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkr1044","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1044","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D115/9475546/gkr1044.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:22194640","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/22194640","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:digitalcommons.unl.edu:usdoepub-1290","is_oa":false,"landing_page_url":"https://digitalcommons.unl.edu/usdoepub/291","pdf_url":null,"source":{"id":"https://openalex.org/S4306513441","display_name":"Insecta mundi","issn_l":"0749-6737","issn":["0749-6737","1942-1354","1942-1362"],"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/P4310316217","host_organization_name":"Center for Systematic Entomology","host_organization_lineage":["https://openalex.org/P4310316217"],"host_organization_lineage_names":["Center for Systematic Entomology"],"type":"journal"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"US Department of Energy Publications","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:40/D1/D115","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/40/D1/D115","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:3245086","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3245086","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkr1044","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkr1044","pdf_url":"https://academic.oup.com/nar/article-pdf/40/D1/D115/9475546/gkr1044.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2097107919.pdf","grobid_xml":"https://content.openalex.org/works/W2097107919.grobid-xml"},"referenced_works_count":40,"referenced_works":["https://openalex.org/W1490137556","https://openalex.org/W1551460710","https://openalex.org/W1981194976","https://openalex.org/W1986555327","https://openalex.org/W1989348205","https://openalex.org/W1992310561","https://openalex.org/W1995117714","https://openalex.org/W2000818024","https://openalex.org/W2023046869","https://openalex.org/W2027448315","https://openalex.org/W2042881722","https://openalex.org/W2045745647","https://openalex.org/W2045843097","https://openalex.org/W2070372183","https://openalex.org/W2089047063","https://openalex.org/W2091232725","https://openalex.org/W2091922579","https://openalex.org/W2095909724","https://openalex.org/W2103461849","https://openalex.org/W2111119053","https://openalex.org/W2114347076","https://openalex.org/W2116423958","https://openalex.org/W2121918723","https://openalex.org/W2123948195","https://openalex.org/W2127391962","https://openalex.org/W2128601422","https://openalex.org/W2130956021","https://openalex.org/W2132247062","https://openalex.org/W2136231029","https://openalex.org/W2141885858","https://openalex.org/W2146312020","https://openalex.org/W2149429041","https://openalex.org/W2150550043","https://openalex.org/W2155606054","https://openalex.org/W2156273926","https://openalex.org/W2171437346","https://openalex.org/W2604823638","https://openalex.org/W4210623056","https://openalex.org/W4214952473","https://openalex.org/W4230392683"],"related_works":["https://openalex.org/W2156963947","https://openalex.org/W123362829","https://openalex.org/W2010315003","https://openalex.org/W3157246076","https://openalex.org/W4319460340","https://openalex.org/W2110444102","https://openalex.org/W2355528748","https://openalex.org/W2910175363","https://openalex.org/W2909402086","https://openalex.org/W3122528128"],"abstract_inverted_index":{"The":[0],"Integrated":[1],"Microbial":[2],"Genomes":[3],"(IMG)":[4],"system":[5],"serves":[6],"as":[7],"a":[8,19,38,61],"community":[9],"resource":[10],"for":[11,50,94],"comparative":[12,62],"analysis":[13,109,113],"of":[14,35,41,56,97,114],"publicly":[15,25],"available":[16,26,86],"genomes":[17,30,59,115],"in":[18,60,81,106],"comprehensive":[20],"integrated":[21],"context.":[22,63],"IMG":[23,45,84,90],"integrates":[24],"draft":[27],"and":[28,43,48,52,58,67,104,112],"complete":[29],"from":[31],"all":[32],"three":[33],"domains":[34],"life":[36],"with":[37],"large":[39],"number":[40],"plasmids":[42],"viruses.":[44],"provides":[46],"tools":[47],"viewers":[49],"analyzing":[51],"reviewing":[53],"the":[54,118],"annotations":[55,99],"genes":[57],"IMG's":[64],"data":[65],"content":[66],"analytical":[68],"capabilities":[69],"have":[70],"been":[71],"continuously":[72],"extended":[73],"through":[74],"regular":[75],"updates":[76],"since":[77],"its":[78],"first":[79],"release":[80],"March":[82],"2005.":[83],"is":[85],"at":[87],"http://img.jgi.doe.gov.":[88],"Companion":[89],"systems":[91],"provide":[92],"support":[93],"expert":[95],"review":[96],"genome":[98,108],"(IMG/ER:":[100],"http://img.jgi.doe.gov/er),":[101],"teaching":[102],"courses":[103],"training":[105],"microbial":[107],"(IMG/EDU:":[110],"http://img.jgi.doe.gov/edu)":[111],"related":[116],"to":[117],"Human":[119],"Microbiome":[120],"Project":[121],"(IMG/HMP:":[122],"http://www.hmpdacc-resources.org/img_hmp).":[123]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":32},{"year":2024,"cited_by_count":56},{"year":2023,"cited_by_count":43},{"year":2022,"cited_by_count":53},{"year":2021,"cited_by_count":79},{"year":2020,"cited_by_count":101},{"year":2019,"cited_by_count":143},{"year":2018,"cited_by_count":149},{"year":2017,"cited_by_count":132},{"year":2016,"cited_by_count":141},{"year":2015,"cited_by_count":142},{"year":2014,"cited_by_count":134},{"year":2013,"cited_by_count":118},{"year":2012,"cited_by_count":36}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
