{"id":"https://openalex.org/W2141611532","doi":"https://doi.org/10.1093/nar/gkq942","title":"NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data","display_name":"NGSmethDB: a database for next-generation sequencing single-cytosine-resolution DNA methylation data","publication_year":2010,"publication_date":"2010-10-21","ids":{"openalex":"https://openalex.org/W2141611532","doi":"https://doi.org/10.1093/nar/gkq942","mag":"2141611532","pmid":"https://pubmed.ncbi.nlm.nih.gov/20965971"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq942","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq942","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkq942","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084745527","display_name":"Michael Hackenberg","orcid":"https://orcid.org/0000-0003-2248-3114"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. Hackenberg","raw_affiliation_strings":["Dpto de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain. mlhack@gmail.com","Dpto de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dpto de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain. mlhack@gmail.com","institution_ids":["https://openalex.org/I173304897"]},{"raw_affiliation_string":"Dpto de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071 Granada, Spain","institution_ids":["https://openalex.org/I173304897"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039320926","display_name":"Guillermo Barturen","orcid":"https://orcid.org/0000-0003-2103-1028"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"G. Barturen","raw_affiliation_strings":["Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071-Granada and Lab. de Bioinform\u00e1tica, Inst. de Biotecnolog\u00eda, Centro de Investigaci\u00f3n Biom\u00e9dica, 18100-Granada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071-Granada and Lab. de Bioinform\u00e1tica, Inst. de Biotecnolog\u00eda, Centro de Investigaci\u00f3n Biom\u00e9dica, 18100-Granada, Spain","institution_ids":["https://openalex.org/I173304897"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5009966967","display_name":"Jos\u00e9 Luis Tejera Oliver","orcid":"https://orcid.org/0000-0003-0216-0393"},"institutions":[{"id":"https://openalex.org/I173304897","display_name":"Universidad de Granada","ror":"https://ror.org/04njjy449","country_code":"ES","type":"education","lineage":["https://openalex.org/I173304897"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J. L. Oliver","raw_affiliation_strings":["Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071-Granada and Lab. de Bioinform\u00e1tica, Inst. de Biotecnolog\u00eda, Centro de Investigaci\u00f3n Biom\u00e9dica, 18100-Granada, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dpto. de Gen\u00e9tica, Facultad de Ciencias, Universidad de Granada, 18071-Granada and Lab. de Bioinform\u00e1tica, Inst. de Biotecnolog\u00eda, Centro de Investigaci\u00f3n Biom\u00e9dica, 18100-Granada, Spain","institution_ids":["https://openalex.org/I173304897"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":[],"corresponding_institution_ids":["https://openalex.org/I173304897"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.5871,"has_fulltext":false,"cited_by_count":55,"citation_normalized_percentile":{"value":0.89817536,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"39","issue":"Database","first_page":"D75","last_page":"D79"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11928","display_name":"Genetic Syndromes and Imprinting","score":0.9868999719619751,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.932200014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8143823146820068},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.7796082496643066},{"id":"https://openalex.org/keywords/methylation","display_name":"Methylation","score":0.7220582962036133},{"id":"https://openalex.org/keywords/cpg-site","display_name":"CpG site","score":0.6331453323364258},{"id":"https://openalex.org/keywords/illumina-methylation-assay","display_name":"Illumina Methylation Assay","score":0.5596480369567871},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5103971362113953},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4775341749191284},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.4598333537578583},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.45147672295570374},{"id":"https://openalex.org/keywords/bisulfite-sequencing","display_name":"Bisulfite sequencing","score":0.42952120304107666},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.38541150093078613},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3340064287185669},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.27873432636260986},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.22944515943527222},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.08401131629943848}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8143823146820068},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.7796082496643066},{"id":"https://openalex.org/C33288867","wikidata":"https://www.wikidata.org/wiki/Q518328","display_name":"Methylation","level":3,"score":0.7220582962036133},{"id":"https://openalex.org/C140173407","wikidata":"https://www.wikidata.org/wiki/Q1138358","display_name":"CpG site","level":5,"score":0.6331453323364258},{"id":"https://openalex.org/C136953436","wikidata":"https://www.wikidata.org/wiki/Q6000286","display_name":"Illumina Methylation Assay","level":5,"score":0.5596480369567871},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5103971362113953},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4775341749191284},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.4598333537578583},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.45147672295570374},{"id":"https://openalex.org/C189235521","wikidata":"https://www.wikidata.org/wiki/Q4087270","display_name":"Bisulfite sequencing","level":5,"score":0.42952120304107666},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.38541150093078613},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3340064287185669},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.27873432636260986},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.22944515943527222},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.08401131629943848}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002875","descriptor_name":"Chromosomes","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D003596","descriptor_name":"Cytosine","qualifier_ui":"Q000032","qualifier_name":"analysis","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018899","descriptor_name":"CpG Islands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D057225","descriptor_name":"Data Mining","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq942","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq942","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20965971","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20965971","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013793","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013793","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:digibug.ugr.es:10481/33380","is_oa":false,"landing_page_url":"http://hdl.handle.net/10481/33380","pdf_url":null,"source":{"id":"https://openalex.org/S4306400567","display_name":"Institutional Repository of the University of Granada (University of Granada)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I173304897","host_organization_name":"Universidad de Granada","host_organization_lineage":["https://openalex.org/I173304897"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq942","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq942","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":18,"referenced_works":["https://openalex.org/W1515703466","https://openalex.org/W1988175941","https://openalex.org/W2040149948","https://openalex.org/W2042545888","https://openalex.org/W2050507681","https://openalex.org/W2054883945","https://openalex.org/W2059099579","https://openalex.org/W2074628531","https://openalex.org/W2074746593","https://openalex.org/W2075520328","https://openalex.org/W2080636110","https://openalex.org/W2091658754","https://openalex.org/W2107903949","https://openalex.org/W2115802074","https://openalex.org/W2139031446","https://openalex.org/W2145477956","https://openalex.org/W2147154551","https://openalex.org/W2161399316"],"related_works":["https://openalex.org/W2106446870","https://openalex.org/W2370756996","https://openalex.org/W2054284274","https://openalex.org/W2520697529","https://openalex.org/W2153751762","https://openalex.org/W2911544435","https://openalex.org/W2020225326","https://openalex.org/W2614855875","https://openalex.org/W2150651400","https://openalex.org/W36683533"],"abstract_inverted_index":{"Next-generation":[0],"sequencing":[1],"(NGS)":[2],"together":[3],"with":[4,131],"bisulphite":[5],"conversion":[6],"allows":[7,19],"the":[8,21,35,40,60,93,120,182],"generation":[9],"of":[10,23,33,64,103,111,122],"whole":[11],"genome":[12,28],"methylation":[13,24,38,65,72,98,106,121],"maps":[14],"at":[15],"single-cytosine":[16],"resolution.":[17],"This":[18],"studying":[20],"absence":[22],"in":[25,100,113],"a":[26,31,80,85,101,109,114],"particular":[27],"region":[29],"over":[30],"range":[32],"tissues,":[34,104],"differential":[36],"tissue":[37],"or":[39,118,162],"changes":[41],"occurring":[42],"along":[43],"pathological":[44],"conditions.":[45],"However,":[46],"no":[47],"database":[48],"exists":[49],"fully":[50],"addressing":[51],"such":[52],"requirements.":[53],"We":[54],"propose":[55],"here":[56],"NGSmethDB":[57,127,167],"(http://bioinfo2.ugr.es/NGSmethDB/gbrowse/)":[58],"for":[59,97,108,156,171,177,186],"storage":[61],"and":[62,75,88,134],"retrieval":[63],"data":[66,90,151,183],"derived":[67],"from":[68],"NGS.":[69],"Two":[70],"cytosine":[71],"contexts":[73],"(CpG":[74],"CAG/CTG)":[76],"are":[77,165],"considered.":[78],"Through":[79],"browser":[81],"interface":[82],"coupled":[83],"to":[84],"MySQL":[86],"backend":[87],"several":[89],"mining":[91],"tools,":[92],"user":[94],"can":[95],"search":[96],"states":[99],"set":[102,110],"retrieve":[105],"values":[107],"tissues":[112],"given":[115],"chromosomal":[116],"region,":[117],"display":[119],"promoters":[123],"among":[124],"different":[125],"tissues.":[126],"is":[128],"currently":[129],"populated":[130],"human,":[132],"mouse":[133],"Arabidopsis":[135],"data,":[136],"but":[137],"other":[138],"methylomes":[139],"will":[140,168],"be":[141,169],"incorporated":[142],"through":[143],"an":[144],"automatic":[145],"pipeline":[146],"as":[147,149,174,176,184],"soon":[148],"new":[150],"become":[152],"available.":[153,166],"Dump":[154],"downloads":[155],"three":[157],"coverage":[158],"levels":[159],"(1,":[160],"5":[161],"10":[163],"reads)":[164],"useful":[170],"experimental":[172],"researchers,":[173],"well":[175],"bioinformaticians,":[178],"who":[179],"might":[180],"use":[181],"input":[185],"further":[187],"research.":[188]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":4},{"year":2017,"cited_by_count":4},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":7},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":7}],"updated_date":"2026-06-26T08:34:08.712188","created_date":"2025-10-10T00:00:00"}