{"id":"https://openalex.org/W2132267839","doi":"https://doi.org/10.1093/nar/gkq906","title":"ChemProt: a disease chemical biology database","display_name":"ChemProt: a disease chemical biology database","publication_year":2010,"publication_date":"2010-10-08","ids":{"openalex":"https://openalex.org/W2132267839","doi":"https://doi.org/10.1093/nar/gkq906","mag":"2132267839","pmid":"https://pubmed.ncbi.nlm.nih.gov/20935044"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq906","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq906","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D367/7637602/gkq906.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D367/7637602/gkq906.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5005294445","display_name":"Olivier Taboureau","orcid":"https://orcid.org/0000-0001-7081-2491"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK"],"is_corresponding":true,"raw_author_name":"O. Taboureau","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark. otab@cbs.dtu.dk","Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark. otab@cbs.dtu.dk","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5091684009","display_name":"S. K. Nielsen","orcid":"https://orcid.org/0000-0003-4175-3829"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"S. K. Nielsen","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068822653","display_name":"Karine Audouze","orcid":"https://orcid.org/0000-0001-7525-4089"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"K. Audouze","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083222517","display_name":"Nils Weinhold","orcid":"https://orcid.org/0000-0003-3290-6192"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"N. Weinhold","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5055025766","display_name":"Daniel Edsg\u00e4rd","orcid":null},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Edsgard","raw_affiliation_strings":["University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109223946","display_name":"Francisco S. Roque","orcid":null},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"F. S. Roque","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047476347","display_name":"Irene Kouskoumvekaki","orcid":"https://orcid.org/0000-0003-2333-8453"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"I. Kouskoumvekaki","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5072997237","display_name":"Alina Bora","orcid":"https://orcid.org/0000-0002-8526-7024"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I58077936","display_name":"Romanian Academy","ror":"https://ror.org/0561n6946","country_code":"RO","type":"archive","lineage":["https://openalex.org/I58077936"]}],"countries":["RO","US"],"is_corresponding":false,"raw_author_name":"A. Bora","raw_affiliation_strings":["Department of Computational Chemistry, Institute of Chemistry, Romanian Academy, Timisoara 300223, Romania and","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computational Chemistry, Institute of Chemistry, Romanian Academy, Timisoara 300223, Romania and","institution_ids":["https://openalex.org/I58077936"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5023930270","display_name":"Ramona Curp\u0103n","orcid":"https://orcid.org/0000-0003-0268-7291"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I58077936","display_name":"Romanian Academy","ror":"https://ror.org/0561n6946","country_code":"RO","type":"archive","lineage":["https://openalex.org/I58077936"]}],"countries":["RO","US"],"is_corresponding":false,"raw_author_name":"R. Curpan","raw_affiliation_strings":["Department of Computational Chemistry, Institute of Chemistry, Romanian Academy, Timisoara 300223, Romania and","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Computational Chemistry, Institute of Chemistry, Romanian Academy, Timisoara 300223, Romania and","institution_ids":["https://openalex.org/I58077936"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5066094707","display_name":"Troels S. Jensen","orcid":"https://orcid.org/0000-0002-3487-6380"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"T. S. Jensen","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011862057","display_name":"S\u00f8ren Brunak","orcid":"https://orcid.org/0000-0003-0316-5866"},"institutions":[{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]},{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"S. Brunak","raw_affiliation_strings":["Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061685157","display_name":"Tudor I. Oprea","orcid":"https://orcid.org/0000-0002-6195-6976"},"institutions":[{"id":"https://openalex.org/I169521973","display_name":"University of New Mexico","ror":"https://ror.org/05fs6jp91","country_code":"US","type":"education","lineage":["https://openalex.org/I169521973"]},{"id":"https://openalex.org/I96673099","display_name":"Technical University of Denmark","ror":"https://ror.org/04qtj9h94","country_code":"DK","type":"education","lineage":["https://openalex.org/I96673099"]}],"countries":["DK","US"],"is_corresponding":false,"raw_author_name":"T. I. Oprea","raw_affiliation_strings":["Department of Biochemistry and Molecular Biology, Division of Biocomputing, University of New Mexico School of Medicine, Albuquerque, New Mexico 87131, USA","Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","University of New Mexico, Albuquerque, United States"],"affiliations":[{"raw_affiliation_string":"Department of Biochemistry and Molecular Biology, Division of Biocomputing, University of New Mexico School of Medicine, Albuquerque, New Mexico 87131, USA","institution_ids":["https://openalex.org/I169521973"]},{"raw_affiliation_string":"Department of Systems Biology, Center for Biological Sequence Analysis, Technical University of Denmark, Lyngby, DK-2800 Denmark,","institution_ids":["https://openalex.org/I96673099"]},{"raw_affiliation_string":"University of New Mexico, Albuquerque, United States","institution_ids":["https://openalex.org/I169521973"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":12,"corresponding_author_ids":["https://openalex.org/A5005294445"],"corresponding_institution_ids":["https://openalex.org/I96673099"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":10.5924,"has_fulltext":true,"cited_by_count":106,"citation_normalized_percentile":{"value":0.98786758,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"39","issue":"Database","first_page":"D367","last_page":"D372"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T10211","display_name":"Computational Drug Discovery Methods","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1703","display_name":"Computational Theory and Mathematics"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9801999926567078,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7903592586517334},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.6435062885284424},{"id":"https://openalex.org/keywords/chemical-biology","display_name":"Chemical biology","score":0.6078636646270752},{"id":"https://openalex.org/keywords/systems-biology","display_name":"Systems biology","score":0.6077536344528198},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5888221859931946},{"id":"https://openalex.org/keywords/drug-discovery","display_name":"Drug discovery","score":0.5565831661224365},{"id":"https://openalex.org/keywords/organism","display_name":"Organism","score":0.5510275959968567},{"id":"https://openalex.org/keywords/disease","display_name":"Disease","score":0.5253507494926453},{"id":"https://openalex.org/keywords/interactome","display_name":"Interactome","score":0.46666353940963745},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.41683489084243774},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3588946461677551},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3399352431297302},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.23220115900039673},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2117357850074768},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.09041488170623779}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7903592586517334},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6435062885284424},{"id":"https://openalex.org/C171852809","wikidata":"https://www.wikidata.org/wiki/Q731154","display_name":"Chemical biology","level":2,"score":0.6078636646270752},{"id":"https://openalex.org/C152662350","wikidata":"https://www.wikidata.org/wiki/Q815297","display_name":"Systems biology","level":2,"score":0.6077536344528198},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5888221859931946},{"id":"https://openalex.org/C74187038","wikidata":"https://www.wikidata.org/wiki/Q1418791","display_name":"Drug discovery","level":2,"score":0.5565831661224365},{"id":"https://openalex.org/C137858568","wikidata":"https://www.wikidata.org/wiki/Q7239","display_name":"Organism","level":2,"score":0.5510275959968567},{"id":"https://openalex.org/C2779134260","wikidata":"https://www.wikidata.org/wiki/Q12136","display_name":"Disease","level":2,"score":0.5253507494926453},{"id":"https://openalex.org/C9760119","wikidata":"https://www.wikidata.org/wiki/Q841382","display_name":"Interactome","level":3,"score":0.46666353940963745},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.41683489084243774},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3588946461677551},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3399352431297302},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.23220115900039673},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2117357850074768},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.09041488170623779},{"id":"https://openalex.org/C142724271","wikidata":"https://www.wikidata.org/wiki/Q7208","display_name":"Pathology","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D004364","descriptor_name":"Pharmaceutical Preparations","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000187","qualifier_name":"drug effects","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D055808","descriptor_name":"Drug Discovery","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkq906","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq906","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D367/7637602/gkq906.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20935044","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20935044","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.829.9116","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.829.9116","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/39/suppl_1/D367.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3013776","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013776","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:pure.atira.dk:openaire_cris_publications/56cf32ee-b840-4e5b-85f6-2eccd48a59a4","is_oa":false,"landing_page_url":"https://researchprofiles.ku.dk/da/publications/56cf32ee-b840-4e5b-85f6-2eccd48a59a4","pdf_url":null,"source":{"id":"https://openalex.org/S4306401983","display_name":"Research at the University of Copenhagen (University of Copenhagen)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I124055696","host_organization_name":"University of Copenhagen","host_organization_lineage":["https://openalex.org/I124055696"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Taboureau , O , Nielsen , S K , Audouze , K M L , Weinhold , N , Edsg\u00e4rd , D , Roque , F S , Kouskoumvekaki , I , Bora , A , Curpan , R , Jensen , T S , Brunak , S & Oprea , T 2011 , ' ChemProt : a disease chemical biology database ' , Nucleic Acids Research , vol. 39 , no. Database issue , pp. D367-72 . https://doi.org/10.1093/nar/gkq906","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/0fc70721-8b81-497e-a5c3-f6ebe0a68dc9","is_oa":true,"landing_page_url":"https://orbit.dtu.dk/en/publications/0fc70721-8b81-497e-a5c3-f6ebe0a68dc9","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Taboureau , O , Nielsen , S K , Audouze , K M L , Weinhold , N , Edsgard , S D , Roque , F J S S A , Kouskoumvekaki , I , Bora , A , Curpan , R , Jensen , T S , Brunak , S &amp; Oprea , T 2011 , ' ChemProt: a disease chemical biology database ' , Nucleic Acids Research , vol. 39 , no. Issue Suppl. 1 , pp. D367-372 . https://doi.org/10.1093/nar/gkq906","raw_type":"article"},{"id":"pmh:oai:pure.atira.dk:publications/9a9ba8a3-c5ca-4293-b3cf-f0bafe06388e","is_oa":false,"landing_page_url":"https://orbit.dtu.dk/en/publications/9a9ba8a3-c5ca-4293-b3cf-f0bafe06388e","pdf_url":null,"source":{"id":"https://openalex.org/S4306400705","display_name":"Technical University of Denmark, DTU Orbit (Technical University of Denmark, DTU)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I96673099","host_organization_name":"Technical University of Denmark","host_organization_lineage":["https://openalex.org/I96673099"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Taboureau , O &amp; Oprea , T I 2013 , ChemProt: A disease chemical biology database . in Computational Chemogenomics . Pan Stanford Publishing . &lt; http://www.panstanford.com &gt;","raw_type":"bookPart"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq906","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq906","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D367/7637602/gkq906.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320327918","display_name":"H. Lundbeck A/S","ror":null}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2132267839.pdf","grobid_xml":"https://content.openalex.org/works/W2132267839.grobid-xml"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W593655028","https://openalex.org/W1492655018","https://openalex.org/W1508416409","https://openalex.org/W1544009106","https://openalex.org/W1966136895","https://openalex.org/W1972821149","https://openalex.org/W1982428412","https://openalex.org/W1986553481","https://openalex.org/W1987522618","https://openalex.org/W1990451437","https://openalex.org/W1992578437","https://openalex.org/W1993416723","https://openalex.org/W1994803330","https://openalex.org/W1997453506","https://openalex.org/W2007287574","https://openalex.org/W2022609682","https://openalex.org/W2046831513","https://openalex.org/W2048384644","https://openalex.org/W2062224011","https://openalex.org/W2083045667","https://openalex.org/W2085316912","https://openalex.org/W2089382377","https://openalex.org/W2096525273","https://openalex.org/W2096864392","https://openalex.org/W2104261859","https://openalex.org/W2108491719","https://openalex.org/W2119412782","https://openalex.org/W2123280311","https://openalex.org/W2124757426","https://openalex.org/W2125288284","https://openalex.org/W2125904022","https://openalex.org/W2127069089","https://openalex.org/W2130687290","https://openalex.org/W2136640051","https://openalex.org/W2137464714","https://openalex.org/W2138512826","https://openalex.org/W2138974722","https://openalex.org/W2142572836","https://openalex.org/W2146542085","https://openalex.org/W2147714160","https://openalex.org/W2148972970","https://openalex.org/W2150934340","https://openalex.org/W2153165014","https://openalex.org/W2155723007","https://openalex.org/W2162011385","https://openalex.org/W2163485494","https://openalex.org/W2164683872","https://openalex.org/W2165674132","https://openalex.org/W2166043581","https://openalex.org/W2170146596","https://openalex.org/W2173560031","https://openalex.org/W2200017991","https://openalex.org/W2315135172","https://openalex.org/W2916288174","https://openalex.org/W2949299408","https://openalex.org/W3165931875","https://openalex.org/W4245543257","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W4292634579","https://openalex.org/W2964314049","https://openalex.org/W2009405916","https://openalex.org/W2063905494","https://openalex.org/W4309353047","https://openalex.org/W2551232208","https://openalex.org/W2087175140","https://openalex.org/W1983456010","https://openalex.org/W2048384644","https://openalex.org/W2980450708"],"abstract_inverted_index":{"Systems":[0],"pharmacology":[1],"is":[2,25,55],"an":[3,169,179],"emergent":[4],"area":[5],"that":[6],"studies":[7],"drug":[8,158],"action":[9],"across":[10],"multiple":[11,61],"scales":[12],"of":[13,38,60,101,127,140,185],"complexity,":[14],"from":[15,161],"molecular":[16],"and":[17,21,112,132,174,176],"cellular":[18],"to":[19,29,33,156],"tissue":[20,113],"organism":[22],"levels.":[23],"There":[24],"a":[26,49,58,95],"critical":[27],"need":[28],"develop":[30],"network-based":[31],"approaches":[32],"integrate":[34],"the":[35,123,138,162],"growing":[36],"body":[37],"chemical":[39,51,164],"biology":[40,52,165],"knowledge":[41],"with":[42,79,171,182],"network":[43,100,106],"biology.":[44],"Here,":[45],"we":[46],"report":[47],"ChemProt,":[48],"disease":[50,111,163],"database,":[53],"which":[54,91],"based":[56,143],"on":[57,144],"compilation":[59],"chemical-protein":[62,89],"annotation":[63,81],"resources,":[64],"as":[65,67,135,137],"well":[66,136],"disease-associated":[68],"protein-protein":[69],"interactions":[70],"(PPIs).":[71],"We":[72,85],"assembled":[73],"more":[74],"than":[75],"700,000":[76],"unique":[77],"chemicals":[78],"biological":[80,151],"for":[82,109],"30,578":[83],"proteins.":[84],"gathered":[86],"over":[87],"2-million":[88],"interactions,":[90],"were":[92],"integrated":[93],"in":[94,122,124],"quality":[96],"scored":[97],"human":[98],"PPI":[99,105],"428,429":[102],"interactions.":[103],"The":[104,188],"layer":[107],"allows":[108],"studying":[110],"specificity":[114],"through":[115],"each":[116],"protein":[117],"complex.":[118],"ChemProt":[119],"can":[120,190],"assist":[121],"silico":[125],"evaluation":[126],"environmental":[128],"chemicals,":[129],"natural":[130],"products":[131],"approved":[133],"drugs,":[134],"selection":[139],"new":[141],"compounds":[142],"their":[145],"activity":[146],"profile":[147],"against":[148],"most":[149],"known":[150],"targets,":[152],"including":[153],"those":[154],"related":[155],"adverse":[157],"events.":[159],"Results":[160],"database":[166],"associate":[167],"citalopram,":[168],"antidepressant,":[170],"osteogenesis":[172],"imperfect":[173],"leukemia":[175],"bisphenol":[177],"A,":[178],"endocrine":[180],"disruptor,":[181],"certain":[183],"types":[184],"cancer,":[186],"respectively.":[187],"server":[189],"be":[191],"accessed":[192],"at":[193],"http://www.cbs.dtu.dk/services/ChemProt/.":[194]},"counts_by_year":[{"year":2025,"cited_by_count":8},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":11},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":8},{"year":2020,"cited_by_count":10},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":13}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
