{"id":"https://openalex.org/W2062884696","doi":"https://doi.org/10.1093/nar/gkq383","title":"fpocket: online tools for protein ensemble pocket detection and tracking","display_name":"fpocket: online tools for protein ensemble pocket detection and tracking","publication_year":2010,"publication_date":"2010-05-16","ids":{"openalex":"https://openalex.org/W2062884696","doi":"https://doi.org/10.1093/nar/gkq383","mag":"2062884696","pmid":"https://pubmed.ncbi.nlm.nih.gov/20478829"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035587835","display_name":"Peter Schmidtke","orcid":"https://orcid.org/0000-0003-3172-3669"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"P. Schmidtke","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina, Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina, Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042943178","display_name":"Vincent Le Guilloux","orcid":null},"institutions":[{"id":"https://openalex.org/I12449238","display_name":"Universit\u00e9 d'Orl\u00e9ans","ror":"https://ror.org/014zrew76","country_code":"FR","type":"education","lineage":["https://openalex.org/I12449238"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES","FR"],"is_corresponding":false,"raw_author_name":"V. Le Guilloux","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","institution_ids":["https://openalex.org/I71999127","https://openalex.org/I154526488","https://openalex.org/I12449238","https://openalex.org/I204730241"]},{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039355513","display_name":"Julien Maupetit","orcid":"https://orcid.org/0000-0001-6285-6646"},"institutions":[{"id":"https://openalex.org/I12449238","display_name":"Universit\u00e9 d'Orl\u00e9ans","ror":"https://ror.org/014zrew76","country_code":"FR","type":"education","lineage":["https://openalex.org/I12449238"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES","FR"],"is_corresponding":false,"raw_author_name":"J. Maupetit","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","institution_ids":["https://openalex.org/I71999127","https://openalex.org/I154526488","https://openalex.org/I12449238","https://openalex.org/I204730241"]},{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002795410","display_name":"Pierre Tuff\u00e9ry","orcid":"https://orcid.org/0000-0003-1033-9895"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"P. Tuffery","raw_affiliation_strings":["Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.6286,"has_fulltext":true,"cited_by_count":295,"citation_normalized_percentile":{"value":0.95512774,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"38","issue":"Web Server","first_page":"W582","last_page":"W589"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7203035354614258},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6685747504234314},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6609225273132324},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5804983377456665},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5222947597503662},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5205779671669006},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.4882366955280304},{"id":"https://openalex.org/keywords/web-site","display_name":"Web site","score":0.46973761916160583},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2807486653327942},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2579494118690491},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.21834823489189148},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.14510124921798706}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7203035354614258},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6685747504234314},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6609225273132324},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5804983377456665},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5222947597503662},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5205779671669006},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.4882366955280304},{"id":"https://openalex.org/C2984519610","wikidata":"https://www.wikidata.org/wiki/Q35127","display_name":"Web site","level":3,"score":0.46973761916160583},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2807486653327942},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2579494118690491},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.21834823489189148},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.14510124921798706},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20478829","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20478829","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_2/W582","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_2/W582","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:2896101","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2896101","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6546994086","display_name":null,"funder_award_id":"UMR-S 973","funder_id":"https://openalex.org/F4320320893","funder_display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale"}],"funders":[{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320323399","display_name":"Universit\u00e9 Paris Diderot","ror":"https://ror.org/02n7qrg46"},{"id":"https://openalex.org/F4320323428","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2062884696.pdf","grobid_xml":"https://content.openalex.org/works/W2062884696.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1517566065","https://openalex.org/W1555195606","https://openalex.org/W1974206962","https://openalex.org/W1982389355","https://openalex.org/W1982770060","https://openalex.org/W1983304433","https://openalex.org/W1991483463","https://openalex.org/W2004175162","https://openalex.org/W2015115140","https://openalex.org/W2019951137","https://openalex.org/W2029667189","https://openalex.org/W2033364819","https://openalex.org/W2036149515","https://openalex.org/W2058463742","https://openalex.org/W2059536443","https://openalex.org/W2066143642","https://openalex.org/W2066672837","https://openalex.org/W2077776336","https://openalex.org/W2091563009","https://openalex.org/W2102245393","https://openalex.org/W2105902442","https://openalex.org/W2112109058","https://openalex.org/W2124960852","https://openalex.org/W2128402268","https://openalex.org/W2130479394","https://openalex.org/W2132395520","https://openalex.org/W2133657429","https://openalex.org/W2134479424","https://openalex.org/W2135052312","https://openalex.org/W2139459324","https://openalex.org/W2140407975","https://openalex.org/W2144258433","https://openalex.org/W2153613893","https://openalex.org/W2154715418","https://openalex.org/W2161427213","https://openalex.org/W2164088236"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2618286804","https://openalex.org/W2358755282","https://openalex.org/W3131163342","https://openalex.org/W2166271660","https://openalex.org/W2142369114"],"abstract_inverted_index":{"Computational":[0],"small-molecule":[1,32],"binding":[2],"site":[3],"detection":[4,34],"has":[5],"several":[6],"important":[7],"applications":[8],"in":[9,57],"the":[10,16,38,72,89],"biomedical":[11],"field.":[12],"Notable":[13],"interests":[14],"are":[15,112],"identification":[17,90],"of":[18,27,69,75,93,105],"cavities":[19],"for":[20],"structure-based":[21],"drug":[22],"discovery":[23],"or":[24],"functional":[25,94],"annotation":[26,92],"structures.":[28],"fpocket":[29,43],"is":[30],"a":[31,67],"pocket":[33,49,52,63,101],"program,":[35],"relying":[36],"on":[37],"geometric":[39],"alpha-sphere":[40],"theory.":[41],"The":[42,108],"web":[44],"server":[45,109],"allows:":[46],"(i)":[47],"candidate":[48],"detection--fpocket;":[50],"(ii)":[51],"tracking":[53],"during":[54],"molecular":[55],"dynamics,":[56],"order":[58],"to":[59,71,83,88],"provide":[60],"insights":[61],"into":[62],"dynamics--mdpocket;":[64],"and":[65,91,95,100,110],"(iii)":[66],"transposition":[68],"mdpocket":[70],"combined":[73],"analysis":[74],"homologous":[76],"structures--hpocket.":[77],"These":[78],"complementary":[79],"online":[80],"tools":[81],"allow":[82],"tackle":[84],"various":[85],"questions":[86],"related":[87],"allosteric":[96],"sites,":[97],"transient":[98],"pockets":[99],"preservation":[102],"within":[103],"evolution":[104],"structural":[106],"families.":[107],"documentation":[111],"freely":[113],"available":[114],"at":[115],"http://bioserv.rpbs.univ-paris-diderot.fr/fpocket.":[116]},"counts_by_year":[{"year":2026,"cited_by_count":6},{"year":2025,"cited_by_count":27},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":30},{"year":2022,"cited_by_count":33},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":27},{"year":2019,"cited_by_count":23},{"year":2018,"cited_by_count":14},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":16}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}