{"id":"https://openalex.org/W2062884696","doi":"https://doi.org/10.1093/nar/gkq383","title":"fpocket: online tools for protein ensemble pocket detection and tracking","display_name":"fpocket: online tools for protein ensemble pocket detection and tracking","publication_year":2010,"publication_date":"2010-05-16","ids":{"openalex":"https://openalex.org/W2062884696","doi":"https://doi.org/10.1093/nar/gkq383","mag":"2062884696","pmid":"https://pubmed.ncbi.nlm.nih.gov/20478829"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5035587835","display_name":"Peter Schmidtke","orcid":"https://orcid.org/0000-0003-3172-3669"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"P. Schmidtke","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina, Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina, Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5042943178","display_name":"Vincent Le Guilloux","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210141565","display_name":"Institut de Chimie Organique et Analytique","ror":"https://ror.org/03ywn7d79","country_code":"FR","type":"facility","lineage":["https://openalex.org/I12449238","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210128300","https://openalex.org/I4210141565"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES","FR"],"is_corresponding":false,"raw_author_name":"V. Le Guilloux","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2 ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3 MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2 ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3 MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210141565"]},{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5039355513","display_name":"Julien Maupetit","orcid":"https://orcid.org/0000-0001-6285-6646"},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210141565","display_name":"Institut de Chimie Organique et Analytique","ror":"https://ror.org/03ywn7d79","country_code":"FR","type":"facility","lineage":["https://openalex.org/I12449238","https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2738703131","https://openalex.org/I4210128300","https://openalex.org/I4210141565"]},{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES","FR"],"is_corresponding":false,"raw_author_name":"J. Maupetit","raw_affiliation_strings":["Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2 ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3 MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Departament de Fisicoquimica and Institut de Biomedicina (IBUB), Facultat de Farmacia, Universitat de Barcelona, 08028, Barcelona, Spain, 2 ICOA, Institut de chimie organique et analytique, University of Orleans, Orleans and 3 MTi, INSERM UMR-S973 and RPBS, Universit\u00ef\u00bf\u00bd Paris Diderot \u2013 Paris 7, F75205 Paris, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210141565"]},{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5002795410","display_name":"Pierre Tuff\u00e9ry","orcid":"https://orcid.org/0000-0003-1033-9895"},"institutions":[{"id":"https://openalex.org/I71999127","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57","country_code":"ES","type":"education","lineage":["https://openalex.org/I71999127"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"P. Tuffery","raw_affiliation_strings":["Universitat de Barcelona, Barcelona, Spain"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Universitat de Barcelona, Barcelona, Spain","institution_ids":["https://openalex.org/I71999127"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":4,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.2298,"has_fulltext":true,"cited_by_count":300,"citation_normalized_percentile":{"value":0.95060592,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"38","issue":"Web Server","first_page":"W582","last_page":"W589"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9993000030517578,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7203035354614258},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.6685747504234314},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6609225273132324},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5804983377456665},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5222947597503662},{"id":"https://openalex.org/keywords/documentation","display_name":"Documentation","score":0.5205779671669006},{"id":"https://openalex.org/keywords/tracking","display_name":"Tracking (education)","score":0.4882366955280304},{"id":"https://openalex.org/keywords/web-site","display_name":"Web site","score":0.46973761916160583},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2807486653327942},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2579494118690491},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.21834823489189148},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.14510124921798706}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7203035354614258},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.6685747504234314},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6609225273132324},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5804983377456665},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5222947597503662},{"id":"https://openalex.org/C56666940","wikidata":"https://www.wikidata.org/wiki/Q788790","display_name":"Documentation","level":2,"score":0.5205779671669006},{"id":"https://openalex.org/C2775936607","wikidata":"https://www.wikidata.org/wiki/Q466845","display_name":"Tracking (education)","level":2,"score":0.4882366955280304},{"id":"https://openalex.org/C2984519610","wikidata":"https://www.wikidata.org/wiki/Q35127","display_name":"Web site","level":3,"score":0.46973761916160583},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2807486653327942},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2579494118690491},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.21834823489189148},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.14510124921798706},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C19417346","wikidata":"https://www.wikidata.org/wiki/Q7922","display_name":"Pedagogy","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006454","descriptor_name":"Hemoglobins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008024","descriptor_name":"Ligands","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040681","descriptor_name":"Structural Homology, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056004","descriptor_name":"Molecular Dynamics Simulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20478829","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20478829","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_2/W582","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_2/W582","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:2896101","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2896101","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq383","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq383","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W582/3857546/gkq383.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G6546994086","display_name":null,"funder_award_id":"UMR-S 973","funder_id":"https://openalex.org/F4320320893","funder_display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale"}],"funders":[{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320321505","display_name":"Generalitat de Catalunya","ror":"https://ror.org/01bg62x04"},{"id":"https://openalex.org/F4320323399","display_name":"Universit\u00e9 Paris Diderot","ror":"https://ror.org/02n7qrg46"},{"id":"https://openalex.org/F4320323428","display_name":"Universitat de Barcelona","ror":"https://ror.org/021018s57"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2062884696.pdf","grobid_xml":"https://content.openalex.org/works/W2062884696.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1517566065","https://openalex.org/W1555195606","https://openalex.org/W1974206962","https://openalex.org/W1982389355","https://openalex.org/W1982770060","https://openalex.org/W1983304433","https://openalex.org/W1991483463","https://openalex.org/W2004175162","https://openalex.org/W2015115140","https://openalex.org/W2019951137","https://openalex.org/W2029667189","https://openalex.org/W2033364819","https://openalex.org/W2036149515","https://openalex.org/W2058463742","https://openalex.org/W2059536443","https://openalex.org/W2066143642","https://openalex.org/W2066672837","https://openalex.org/W2077776336","https://openalex.org/W2091563009","https://openalex.org/W2102245393","https://openalex.org/W2105902442","https://openalex.org/W2112109058","https://openalex.org/W2124960852","https://openalex.org/W2128402268","https://openalex.org/W2130479394","https://openalex.org/W2132395520","https://openalex.org/W2133657429","https://openalex.org/W2134479424","https://openalex.org/W2135052312","https://openalex.org/W2139459324","https://openalex.org/W2140407975","https://openalex.org/W2144258433","https://openalex.org/W2153613893","https://openalex.org/W2154715418","https://openalex.org/W2161427213","https://openalex.org/W2164088236"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2618286804","https://openalex.org/W2358755282","https://openalex.org/W3131163342","https://openalex.org/W2166271660","https://openalex.org/W2142369114"],"abstract_inverted_index":{"Computational":[0],"small-molecule":[1,32],"binding":[2],"site":[3],"detection":[4,34],"has":[5],"several":[6],"important":[7],"applications":[8],"in":[9,57],"the":[10,16,38,72,89],"biomedical":[11],"field.":[12],"Notable":[13],"interests":[14],"are":[15,112],"identification":[17,90],"of":[18,27,69,75,93,105],"cavities":[19],"for":[20],"structure-based":[21],"drug":[22],"discovery":[23],"or":[24],"functional":[25,94],"annotation":[26,92],"structures.":[28],"fpocket":[29,43],"is":[30],"a":[31,67],"pocket":[33,49,52,63,101],"program,":[35],"relying":[36],"on":[37],"geometric":[39],"alpha-sphere":[40],"theory.":[41],"The":[42,108],"web":[44],"server":[45,109],"allows:":[46],"(i)":[47],"candidate":[48],"detection--fpocket;":[50],"(ii)":[51],"tracking":[53],"during":[54],"molecular":[55],"dynamics,":[56],"order":[58],"to":[59,71,83,88],"provide":[60],"insights":[61],"into":[62],"dynamics--mdpocket;":[64],"and":[65,91,95,100,110],"(iii)":[66],"transposition":[68],"mdpocket":[70],"combined":[73],"analysis":[74],"homologous":[76],"structures--hpocket.":[77],"These":[78],"complementary":[79],"online":[80],"tools":[81],"allow":[82],"tackle":[84],"various":[85],"questions":[86],"related":[87],"allosteric":[96],"sites,":[97],"transient":[98],"pockets":[99],"preservation":[102],"within":[103],"evolution":[104],"structural":[106],"families.":[107],"documentation":[111],"freely":[113],"available":[114],"at":[115],"http://bioserv.rpbs.univ-paris-diderot.fr/fpocket.":[116]},"counts_by_year":[{"year":2026,"cited_by_count":10},{"year":2025,"cited_by_count":27},{"year":2024,"cited_by_count":29},{"year":2023,"cited_by_count":30},{"year":2022,"cited_by_count":33},{"year":2021,"cited_by_count":22},{"year":2020,"cited_by_count":28},{"year":2019,"cited_by_count":23},{"year":2018,"cited_by_count":14},{"year":2017,"cited_by_count":17},{"year":2016,"cited_by_count":11},{"year":2015,"cited_by_count":11},{"year":2014,"cited_by_count":11},{"year":2013,"cited_by_count":10},{"year":2012,"cited_by_count":16}],"updated_date":"2026-07-15T18:14:33.161393","created_date":"2025-10-10T00:00:00"}
