{"id":"https://openalex.org/W2166287003","doi":"https://doi.org/10.1093/nar/gkq340","title":"SBSPKS: structure based sequence analysis of polyketide synthases","display_name":"SBSPKS: structure based sequence analysis of polyketide synthases","publication_year":2010,"publication_date":"2010-05-05","ids":{"openalex":"https://openalex.org/W2166287003","doi":"https://doi.org/10.1093/nar/gkq340","mag":"2166287003","pmid":"https://pubmed.ncbi.nlm.nih.gov/20444870"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq340","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq340","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkq340","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029727002","display_name":"Swadha Anand","orcid":"https://orcid.org/0000-0003-3272-8285"},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Swadha Anand","raw_affiliation_strings":["National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India","National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210156726"]},{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5063067807","display_name":"Manoj Prasad","orcid":"https://orcid.org/0000-0003-0691-0163"},"institutions":[{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]},{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"M. V. R. Prasad","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5041558523","display_name":"Gitanjali Yadav","orcid":"https://orcid.org/0000-0001-6591-9964"},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Gitanjali Yadav","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5082480513","display_name":"Narendra Kumar","orcid":"https://orcid.org/0000-0002-3978-8742"},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Narendra Kumar","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075606873","display_name":"Jyoti Shehara","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Jyoti Shehara","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102163991","display_name":"Md. Zeeshan Ansari","orcid":null},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"Md. Zeeshan Ansari","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5066836332","display_name":"Debasisa Mohanty","orcid":"https://orcid.org/0000-0002-3374-0588"},"institutions":[{"id":"https://openalex.org/I4210153536","display_name":"National Institute of Plant Genome Research","ror":"https://ror.org/04zw11527","country_code":"IN","type":"facility","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210153536"]},{"id":"https://openalex.org/I4210156726","display_name":"National Institute of Immunology","ror":"https://ror.org/04fhee747","country_code":"IN","type":"government","lineage":["https://openalex.org/I2799351866","https://openalex.org/I4210134808","https://openalex.org/I4210156726"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"Debasisa Mohanty","raw_affiliation_strings":["National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India"],"affiliations":[{"raw_affiliation_string":"National Institute of Immunology and 2National Institute of Plant Genome Research, Aruna Asaf Ali Marg, New Delhi 110067, India","institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5066836332"],"corresponding_institution_ids":["https://openalex.org/I4210153536","https://openalex.org/I4210156726"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":12.358,"has_fulltext":false,"cited_by_count":178,"citation_normalized_percentile":{"value":0.9907325,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"38","issue":"suppl_2","first_page":"W487","last_page":"W496"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9977999925613403,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11340","display_name":"Marine Sponges and Natural Products","score":0.9807999730110168,"subfield":{"id":"https://openalex.org/subfields/1305","display_name":"Biotechnology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7340270280838013},{"id":"https://openalex.org/keywords/polyketide","display_name":"Polyketide","score":0.657842218875885},{"id":"https://openalex.org/keywords/polyketide-synthase","display_name":"Polyketide synthase","score":0.609106183052063},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5547931790351868},{"id":"https://openalex.org/keywords/acyl-carrier-protein","display_name":"Acyl carrier protein","score":0.5497688055038452},{"id":"https://openalex.org/keywords/orfs","display_name":"ORFS","score":0.5353966355323792},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.5309911370277405},{"id":"https://openalex.org/keywords/linker","display_name":"Linker","score":0.49958062171936035},{"id":"https://openalex.org/keywords/docking","display_name":"Docking (animal)","score":0.47371047735214233},{"id":"https://openalex.org/keywords/dock","display_name":"DOCK","score":0.47180405259132385},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.43453747034072876},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.42231500148773193},{"id":"https://openalex.org/keywords/biosynthesis","display_name":"Biosynthesis","score":0.39132213592529297},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.323685884475708},{"id":"https://openalex.org/keywords/open-reading-frame","display_name":"Open reading frame","score":0.32147207856178284},{"id":"https://openalex.org/keywords/enzyme","display_name":"Enzyme","score":0.20664411783218384},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.18560701608657837},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.1370806097984314},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1241089403629303}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7340270280838013},{"id":"https://openalex.org/C2778635478","wikidata":"https://www.wikidata.org/wiki/Q516751","display_name":"Polyketide","level":4,"score":0.657842218875885},{"id":"https://openalex.org/C2777763344","wikidata":"https://www.wikidata.org/wiki/Q4369963","display_name":"Polyketide synthase","level":5,"score":0.609106183052063},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5547931790351868},{"id":"https://openalex.org/C2780786045","wikidata":"https://www.wikidata.org/wiki/Q1087229","display_name":"Acyl carrier protein","level":4,"score":0.5497688055038452},{"id":"https://openalex.org/C2780530800","wikidata":"https://www.wikidata.org/wiki/Q7072921","display_name":"ORFS","level":5,"score":0.5353966355323792},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.5309911370277405},{"id":"https://openalex.org/C2780557392","wikidata":"https://www.wikidata.org/wiki/Q523796","display_name":"Linker","level":2,"score":0.49958062171936035},{"id":"https://openalex.org/C41685203","wikidata":"https://www.wikidata.org/wiki/Q1974042","display_name":"Docking (animal)","level":2,"score":0.47371047735214233},{"id":"https://openalex.org/C93073132","wikidata":"https://www.wikidata.org/wiki/Q24726581","display_name":"DOCK","level":2,"score":0.47180405259132385},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.43453747034072876},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.42231500148773193},{"id":"https://openalex.org/C553450214","wikidata":"https://www.wikidata.org/wiki/Q851162","display_name":"Biosynthesis","level":3,"score":0.39132213592529297},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.323685884475708},{"id":"https://openalex.org/C47289529","wikidata":"https://www.wikidata.org/wiki/Q908550","display_name":"Open reading frame","level":4,"score":0.32147207856178284},{"id":"https://openalex.org/C181199279","wikidata":"https://www.wikidata.org/wiki/Q8047","display_name":"Enzyme","level":2,"score":0.20664411783218384},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.18560701608657837},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.1370806097984314},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1241089403629303},{"id":"https://openalex.org/C159110408","wikidata":"https://www.wikidata.org/wiki/Q121176","display_name":"Nursing","level":1,"score":0.0},{"id":"https://openalex.org/C71924100","wikidata":"https://www.wikidata.org/wiki/Q11190","display_name":"Medicine","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008958","descriptor_name":"Models, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D013379","descriptor_name":"Substrate Specificity","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020134","descriptor_name":"Catalytic Domain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020134","descriptor_name":"Catalytic Domain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020134","descriptor_name":"Catalytic Domain","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D048630","descriptor_name":"Polyketide Synthases","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq340","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq340","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20444870","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20444870","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_2/W487","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_2/W487","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:2896141","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkq340","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq340","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq340","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":51,"referenced_works":["https://openalex.org/W124486335","https://openalex.org/W1808852104","https://openalex.org/W1934400729","https://openalex.org/W1964494771","https://openalex.org/W1965315943","https://openalex.org/W1965404937","https://openalex.org/W1969153582","https://openalex.org/W1969961481","https://openalex.org/W1970386034","https://openalex.org/W1975439502","https://openalex.org/W1977385550","https://openalex.org/W1980095813","https://openalex.org/W1980498900","https://openalex.org/W1986587450","https://openalex.org/W1988916934","https://openalex.org/W1996120705","https://openalex.org/W1997173708","https://openalex.org/W2004481736","https://openalex.org/W2005042667","https://openalex.org/W2006415458","https://openalex.org/W2013552608","https://openalex.org/W2013619747","https://openalex.org/W2015403140","https://openalex.org/W2017346552","https://openalex.org/W2017355657","https://openalex.org/W2025889664","https://openalex.org/W2027566373","https://openalex.org/W2034511497","https://openalex.org/W2036561818","https://openalex.org/W2046006818","https://openalex.org/W2054474037","https://openalex.org/W2056560532","https://openalex.org/W2062185057","https://openalex.org/W2065350770","https://openalex.org/W2066759303","https://openalex.org/W2080895748","https://openalex.org/W2087404203","https://openalex.org/W2089237779","https://openalex.org/W2091322807","https://openalex.org/W2094402554","https://openalex.org/W2097118224","https://openalex.org/W2112029566","https://openalex.org/W2114839447","https://openalex.org/W2117113877","https://openalex.org/W2148927739","https://openalex.org/W2149597323","https://openalex.org/W2153163110","https://openalex.org/W2156202011","https://openalex.org/W2159489517","https://openalex.org/W2169595886","https://openalex.org/W2170889268"],"related_works":["https://openalex.org/W2897880682","https://openalex.org/W1978903296","https://openalex.org/W1978614508","https://openalex.org/W2979899722","https://openalex.org/W2973441197","https://openalex.org/W4389025658","https://openalex.org/W2058926555","https://openalex.org/W1970656642","https://openalex.org/W2066959865","https://openalex.org/W1993274596"],"abstract_inverted_index":{"Polyketide":[0],"synthases":[1],"(PKSs)":[2],"catalyze":[3],"biosynthesis":[4],"of":[5,9,16,21,30,42,51,55,76,89,92,105,121,132,147,154,172,191],"a":[6,25,173],"diverse":[7],"family":[8],"pharmaceutically":[10],"important":[11],"secondary":[12,44],"metabolites.":[13],"Bioinformatics":[14],"analysis":[15,88],"sequence":[17,171],"and":[18,59,62,87,103,178],"structural":[19],"features":[20],"PKS":[22,57,94,101,134,176],"proteins":[23],"plays":[24],"crucial":[26],"role":[27],"in":[28,40,115,169,187],"discovery":[29],"new":[31],"natural":[32],"products":[33],"by":[34,46],"genome":[35],"mining,":[36],"as":[37,39],"well":[38],"design":[41],"novel":[43],"metabolites":[45],"biosynthetic":[47],"engineering.":[48],"The":[49],"availability":[50],"the":[52,110,126,144,170,188],"crystal":[53],"structures":[54,98],"various":[56,166],"catalytic":[58,95,167],"docking":[60,127],"domains,":[61,96],"mammalian":[63],"fatty":[64],"acid":[65],"synthase":[66],"module":[67],"prompted":[68],"us":[69],"to":[70,125],"develop":[71],"SBSPKS":[72,193],"software":[73],"which":[74],"consists":[75],"three":[77],"major":[78],"components.":[79],"Model_3D_PKS":[80],"can":[81,142],"be":[82],"used":[83],"for":[84,99,164],"modeling,":[85],"visualization":[86],"3D":[90],"structure":[91],"individual":[93],"dimeric":[97],"complete":[100],"modules":[102],"prediction":[104],"substrate":[106,148],"specificity.":[107],"Dock_Dom_Anal":[108],"identifies":[109],"key":[111],"interacting":[112],"residue":[113],"pairs":[114],"inter-subunit":[116],"interfaces":[117],"based":[118,150],"on":[119,151],"alignment":[120],"inter-polypeptide":[122],"linker":[123],"sequences":[124],"domain":[128],"structure.":[129],"In":[130],"case":[131],"modular":[133],"with":[135,181],"multiple":[136],"open":[137],"reading":[138],"frames":[139],"(ORFs),":[140],"it":[141],"predict":[143],"cognate":[145],"order":[146],"channeling":[149],"combinatorial":[152],"evaluation":[153],"all":[155],"possible":[156],"interface":[157],"contacts.":[158],"NRPS-PKS":[159],"provides":[160],"user":[161],"friendly":[162],"tools":[163],"identifying":[165],"domains":[168],"Type":[174],"I":[175],"protein":[177],"comparing":[179],"them":[180],"experimentally":[182],"characterized":[183],"PKS/NRPS":[184],"clusters":[185],"cataloged":[186],"backend":[189],"databases":[190],"SBSPKS.":[192],"is":[194],"available":[195],"at":[196],"http://www.nii.ac.in/sbspks.html.":[197]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":2},{"year":2024,"cited_by_count":5},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":10},{"year":2021,"cited_by_count":13},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":10},{"year":2017,"cited_by_count":13},{"year":2016,"cited_by_count":22},{"year":2015,"cited_by_count":18},{"year":2014,"cited_by_count":20},{"year":2013,"cited_by_count":15},{"year":2012,"cited_by_count":20}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
