{"id":"https://openalex.org/W1992512552","doi":"https://doi.org/10.1093/nar/gkq310","title":"agriGO: a GO analysis toolkit for the agricultural community","display_name":"agriGO: a GO analysis toolkit for the agricultural community","publication_year":2010,"publication_date":"2010-04-30","ids":{"openalex":"https://openalex.org/W1992512552","doi":"https://doi.org/10.1093/nar/gkq310","mag":"1992512552","pmid":"https://pubmed.ncbi.nlm.nih.gov/20435677"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq310","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq310","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W64/16771472/gkq310.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W64/16771472/gkq310.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113677960","display_name":"Zhou Du","orcid":"https://orcid.org/0009-0004-9095-9828"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Zhou Du","raw_affiliation_strings":["State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5060877490","display_name":"Xin Zhou","orcid":"https://orcid.org/0000-0002-1407-7952"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Xin Zhou","raw_affiliation_strings":["State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074509081","display_name":"Yi Ling","orcid":"https://orcid.org/0000-0001-7392-8641"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Yi Ling","raw_affiliation_strings":["State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058638624","display_name":"Zhenhai Zhang","orcid":"https://orcid.org/0000-0002-4310-0525"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN","US"],"is_corresponding":false,"raw_author_name":"Zhenhai Zhang","raw_affiliation_strings":["State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;","institution_ids":["https://openalex.org/I130238516"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5079263322","display_name":"Zhen Su","orcid":"https://orcid.org/0000-0001-6579-3847"},"institutions":[{"id":"https://openalex.org/I130238516","display_name":"University of Minnesota","ror":"https://ror.org/017zqws13","country_code":"US","type":"education","lineage":["https://openalex.org/I130238516"]},{"id":"https://openalex.org/I52158045","display_name":"China Agricultural University","ror":"https://ror.org/04v3ywz14","country_code":"CN","type":"education","lineage":["https://openalex.org/I52158045"]}],"countries":["CN","US"],"is_corresponding":true,"raw_author_name":"Zhen Su","raw_affiliation_strings":["State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing 100193, China","institution_ids":["https://openalex.org/I52158045"]},{"raw_affiliation_string":"State Key Laboratory of Plant Physiology and Biochemistry,  College of Biological Sciences,  China Agricultural University,  Beijing 100193,  China;","institution_ids":["https://openalex.org/I130238516"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":2,"corresponding_author_ids":["https://openalex.org/A5079263322"],"corresponding_institution_ids":["https://openalex.org/I130238516","https://openalex.org/I52158045"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":32.6307,"has_fulltext":true,"cited_by_count":2511,"citation_normalized_percentile":{"value":0.99872043,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"38","issue":"suppl_2","first_page":"W64","last_page":"W70"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9900000095367432,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/identifier","display_name":"Identifier","score":0.702433168888092},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6002854108810425},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5685259699821472},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5408930778503418},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.5198929309844971},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.4255329668521881},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.41626033186912537},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3463491201400757},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3375675082206726},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.11643430590629578},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1013641357421875},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.10005956888198853}],"concepts":[{"id":"https://openalex.org/C154504017","wikidata":"https://www.wikidata.org/wiki/Q853614","display_name":"Identifier","level":2,"score":0.702433168888092},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6002854108810425},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5685259699821472},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5408930778503418},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.5198929309844971},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.4255329668521881},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.41626033186912537},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3463491201400757},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3375675082206726},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.11643430590629578},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1013641357421875},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.10005956888198853},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017343","descriptor_name":"Genes, Plant","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D018556","descriptor_name":"Crops, Agricultural","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq310","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq310","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W64/16771472/gkq310.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:20435677","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/20435677","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2896167","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2896167","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_2/W64","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_2/W64","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq310","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq310","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_2/W64/16771472/gkq310.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1992512552.pdf","grobid_xml":"https://content.openalex.org/works/W1992512552.grobid-xml"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W1596515083","https://openalex.org/W1964895626","https://openalex.org/W1969808215","https://openalex.org/W1974116356","https://openalex.org/W1985904552","https://openalex.org/W2002615469","https://openalex.org/W2072285646","https://openalex.org/W2088387316","https://openalex.org/W2091448229","https://openalex.org/W2096561521","https://openalex.org/W2096939566","https://openalex.org/W2098758691","https://openalex.org/W2102074241","https://openalex.org/W2102992354","https://openalex.org/W2103017472","https://openalex.org/W2108539496","https://openalex.org/W2110065044","https://openalex.org/W2120176508","https://openalex.org/W2121001818","https://openalex.org/W2121044470","https://openalex.org/W2122683221","https://openalex.org/W2124388496","https://openalex.org/W2126623160","https://openalex.org/W2133465414","https://openalex.org/W2139084975","https://openalex.org/W2139655181","https://openalex.org/W2141885858","https://openalex.org/W2158714788","https://openalex.org/W2164154943","https://openalex.org/W2167272207","https://openalex.org/W2167865654","https://openalex.org/W2170989872","https://openalex.org/W2171030481","https://openalex.org/W2582743722","https://openalex.org/W4206316875","https://openalex.org/W4210623056","https://openalex.org/W6675471023","https://openalex.org/W6678230397"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W4378651134","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W1979633005","https://openalex.org/W1649706580","https://openalex.org/W3195608031"],"abstract_inverted_index":{"Gene":[0,130,150],"Ontology":[1],"(GO),":[2],"the":[3,31,35,77],"de":[4],"facto":[5],"standard":[6],"in":[7,14,64,68,116,189],"gene":[8,94],"functionality":[9],"description,":[10],"is":[11,55,113,138,207],"used":[12],"widely":[13],"functional":[15],"annotation":[16,121],"and":[17,51,60,80,88,93,120,135,158,187,203],"enrichment":[18,41,144],"analysis.":[19],"Here,":[20],"we":[21],"introduce":[22],"agriGO,":[23,76],"an":[24],"integrated":[25,165],"web-based":[26],"GO":[27,40,198],"analysis":[28,46,127],"toolkit":[29,168],"for":[30,57],"agricultural":[32,101],"community,":[33],"using":[34,129],"advantages":[36],"of":[37,104,149,162],"our":[38],"previous":[39],"tool":[42],"(EasyGO),":[43],"to":[44,85,169],"meet":[45,170],"demands":[47],"from":[48,72],"new":[49,126],"technologies":[50],"research":[52],"objectives.":[53],"EasyGO":[54],"valuable":[56],"its":[58],"proficiency,":[59],"has":[61],"proved":[62],"useful":[63],"uncovering":[65],"biological":[66],"knowledge":[67],"massive":[69],"data":[70,106,182,199],"sets":[71,183],"high-throughput":[73],"experiments.":[74],"For":[75],"system":[78],"architecture":[79],"website":[81],"interface":[82],"were":[83,96],"redesigned":[84],"improve":[86],"performance":[87],"accessibility.":[89],"The":[90,108],"supported":[91],"organisms":[92],"identifiers":[95],"substantially":[97],"expanded":[98],"(including":[99],"38":[100],"species":[102],"composed":[103],"274":[105],"types).":[107],"requirement":[109],"on":[110],"user":[111],"input":[112],"more":[114],"flexible,":[115],"that":[117,180],"user-defined":[118],"reference":[119],"are":[122,164],"accepted.":[123],"Moreover,":[124],"a":[125,167,176,190,197],"approach":[128],"Set":[131],"Enrichment":[132],"Analysis":[133,148],"strategy":[134],"customizable":[136],"features":[137],"provided.":[139],"Four":[140],"tools,":[141],"SEA":[142],"(Singular":[143],"analysis),":[145],"PAGE":[146],"(Parametric":[147],"set":[151],"Enrichment),":[152],"BLAST4ID":[153],"(Transfer":[154],"IDs":[155],"by":[156],"BLAST)":[157],"SEACOMPARE":[159],"(Cross":[160],"comparison":[161],"SEA),":[163],"as":[166,196],"different":[171,181],"demands.":[172],"We":[173],"also":[174],"provide":[175],"cross-comparison":[177],"service":[178],"so":[179],"can":[184],"be":[185],"compared":[186],"explored":[188],"visualized":[191],"way.":[192],"Lastly,":[193],"agriGO":[194,206],"functions":[195],"repository":[200],"with":[201],"search":[202],"download":[204],"functions;":[205],"publicly":[208],"accessible":[209],"at":[210],"http://bioinfo.cau.edu.cn/agriGO/.":[211]},"counts_by_year":[{"year":2026,"cited_by_count":16},{"year":2025,"cited_by_count":45},{"year":2024,"cited_by_count":63},{"year":2023,"cited_by_count":72},{"year":2022,"cited_by_count":148},{"year":2021,"cited_by_count":246},{"year":2020,"cited_by_count":177},{"year":2019,"cited_by_count":225},{"year":2018,"cited_by_count":236},{"year":2017,"cited_by_count":320},{"year":2016,"cited_by_count":267},{"year":2015,"cited_by_count":232},{"year":2014,"cited_by_count":199},{"year":2013,"cited_by_count":138},{"year":2012,"cited_by_count":79}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
