{"id":"https://openalex.org/W1995016303","doi":"https://doi.org/10.1093/nar/gkq1256","title":"mESAdb: microRNA Expression and Sequence Analysis Database","display_name":"mESAdb: microRNA Expression and Sequence Analysis Database","publication_year":2010,"publication_date":"2010-12-16","ids":{"openalex":"https://openalex.org/W1995016303","doi":"https://doi.org/10.1093/nar/gkq1256","mag":"1995016303","pmid":"https://pubmed.ncbi.nlm.nih.gov/21177657"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1256","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1256","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D170/18787479/gkq1256.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D170/18787479/gkq1256.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5044978143","display_name":"Koray Dogan Kaya","orcid":null},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Koray D. Kaya","raw_affiliation_strings":["Department of Molecular Biology and Genetics, Bilkent University, 06800 Ankara, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Biology and Genetics, Bilkent University, 06800 Ankara, Turkey","institution_ids":["https://openalex.org/I168864056"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5036340226","display_name":"G\u00f6khan Karak\u00fclah","orcid":"https://orcid.org/0000-0001-6706-1375"},"institutions":[{"id":"https://openalex.org/I193615760","display_name":"Dokuz Eyl\u00fcl University","ror":"https://ror.org/00dbd8b73","country_code":"TR","type":"education","lineage":["https://openalex.org/I193615760"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"G\u00f6khan Karak\u00fclah","raw_affiliation_strings":["Dokuz Eyl\u00fcl University, Izmir, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dokuz Eyl\u00fcl University, Izmir, Turkey","institution_ids":["https://openalex.org/I193615760"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004862757","display_name":"Cengiz Yak\u0131c\u0131er","orcid":"https://orcid.org/0000-0003-3640-9417"},"institutions":[{"id":"https://openalex.org/I168864056","display_name":"Bilkent University","ror":"https://ror.org/02vh8a032","country_code":"TR","type":"education","lineage":["https://openalex.org/I168864056"]},{"id":"https://openalex.org/I193615760","display_name":"Dokuz Eyl\u00fcl University","ror":"https://ror.org/00dbd8b73","country_code":"TR","type":"education","lineage":["https://openalex.org/I193615760"]},{"id":"https://openalex.org/I322491407","display_name":"Ac\u0131badem University","ror":"https://ror.org/01rp2a061","country_code":"TR","type":"education","lineage":["https://openalex.org/I322491407"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Cengiz M. Yak\u0131c\u0131er","raw_affiliation_strings":["Department of Medical Biology , Acibadem University , 34848 Maltepe , Istanbul ,","Department of Molecular Biology and Genetics , Bilkent University , 06800 Ankara , Turkey,","Dokuz Eyl\u00fcl University, Izmir, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Medical Biology , Acibadem University , 34848 Maltepe , Istanbul ,","institution_ids":["https://openalex.org/I322491407"]},{"raw_affiliation_string":"Department of Molecular Biology and Genetics , Bilkent University , 06800 Ankara , Turkey,","institution_ids":["https://openalex.org/I168864056"]},{"raw_affiliation_string":"Dokuz Eyl\u00fcl University, Izmir, Turkey","institution_ids":["https://openalex.org/I193615760"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5037079774","display_name":"Aybar C. Acar","orcid":"https://orcid.org/0000-0001-5694-8675"},"institutions":[{"id":"https://openalex.org/I193615760","display_name":"Dokuz Eyl\u00fcl University","ror":"https://ror.org/00dbd8b73","country_code":"TR","type":"education","lineage":["https://openalex.org/I193615760"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"Aybar C. Acar","raw_affiliation_strings":["Department of Computer Engineering","Dokuz Eyl\u00fcl University, Izmir, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Engineering","institution_ids":[]},{"raw_affiliation_string":"Dokuz Eyl\u00fcl University, Izmir, Turkey","institution_ids":["https://openalex.org/I193615760"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5084851102","display_name":"\u00d6zlen Konu","orcid":"https://orcid.org/0000-0002-6223-5329"},"institutions":[{"id":"https://openalex.org/I193615760","display_name":"Dokuz Eyl\u00fcl University","ror":"https://ror.org/00dbd8b73","country_code":"TR","type":"education","lineage":["https://openalex.org/I193615760"]}],"countries":["TR"],"is_corresponding":false,"raw_author_name":"\u00d6zlen Konu","raw_affiliation_strings":["Dokuz Eyl\u00fcl University, Izmir, Turkey"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Dokuz Eyl\u00fcl University, Izmir, Turkey","institution_ids":["https://openalex.org/I193615760"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.0269,"has_fulltext":true,"cited_by_count":40,"citation_normalized_percentile":{"value":0.77402085,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"39","issue":"suppl_1","first_page":"D170","last_page":"D180"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7080966830253601},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.5814156532287598},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.580607533454895},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5133621096611023},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5120232701301575},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5052061676979065},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.49147236347198486},{"id":"https://openalex.org/keywords/kegg","display_name":"KEGG","score":0.4624820649623871},{"id":"https://openalex.org/keywords/visualization","display_name":"Visualization","score":0.43105530738830566},{"id":"https://openalex.org/keywords/sequence-analysis","display_name":"Sequence analysis","score":0.43029627203941345},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.336948037147522},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.31194308400154114},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.3005636930465698},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2360379993915558},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.1513580083847046},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.13974568247795105},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.1321549415588379},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.09651750326156616}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7080966830253601},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.5814156532287598},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.580607533454895},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5133621096611023},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5120232701301575},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5052061676979065},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.49147236347198486},{"id":"https://openalex.org/C152724338","wikidata":"https://www.wikidata.org/wiki/Q909442","display_name":"KEGG","level":5,"score":0.4624820649623871},{"id":"https://openalex.org/C36464697","wikidata":"https://www.wikidata.org/wiki/Q451553","display_name":"Visualization","level":2,"score":0.43105530738830566},{"id":"https://openalex.org/C61053724","wikidata":"https://www.wikidata.org/wiki/Q1154615","display_name":"Sequence analysis","level":3,"score":0.43029627203941345},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.336948037147522},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.31194308400154114},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.3005636930465698},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2360379993915558},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.1513580083847046},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.13974568247795105},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.1321549415588379},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.09651750326156616}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkq1256","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1256","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D170/18787479/gkq1256.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21177657","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21177657","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013750","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013750","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:open.metu.edu.tr:11511/32307","is_oa":true,"landing_page_url":"https://hdl.handle.net/11511/32307","pdf_url":null,"source":{"id":"https://openalex.org/S4306402495","display_name":"OpenMETU (Middle East Technical University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I201799495","host_organization_name":"Middle East Technical University","host_organization_lineage":["https://openalex.org/I201799495"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-nd","license_id":"https://openalex.org/licenses/cc-by-nc-nd","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Journal Article"},{"id":"pmh:oai:repository.bilkent.edu.tr:11693/12012","is_oa":false,"landing_page_url":"http://hdl.handle.net/11693/12012","pdf_url":null,"source":{"id":"https://openalex.org/S4306400079","display_name":"Bilkent University Institutional Repository (Bilkent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I168864056","host_organization_name":"Bilkent University","host_organization_lineage":["https://openalex.org/I168864056"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"Article"},{"id":"pmh:oai:repository.bilkent.edu.tr:11693/12013","is_oa":false,"landing_page_url":"http://hdl.handle.net/11693/12013","pdf_url":null,"source":{"id":"https://openalex.org/S4306400079","display_name":"Bilkent University Institutional Repository (Bilkent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I168864056","host_organization_name":"Bilkent University","host_organization_lineage":["https://openalex.org/I168864056"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"Article"},{"id":"pmh:oai:repository.bilkent.edu.tr:11693/22055","is_oa":false,"landing_page_url":"http://hdl.handle.net/11693/22055","pdf_url":null,"source":{"id":"https://openalex.org/S4306400079","display_name":"Bilkent University Institutional Repository (Bilkent University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I168864056","host_organization_name":"Bilkent University","host_organization_lineage":["https://openalex.org/I168864056"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1256","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1256","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D170/18787479/gkq1256.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320322626","display_name":"T\u00fcrkiye Bilimsel ve Teknolojik Ara\u015ft\u0131rma Kurumu","ror":"https://ror.org/04w9kkr77"},{"id":"https://openalex.org/F4320323792","display_name":"Bilkent \u00dcniversitesi","ror":"https://ror.org/02vh8a032"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1995016303.pdf","grobid_xml":"https://content.openalex.org/works/W1995016303.grobid-xml"},"referenced_works_count":54,"referenced_works":["https://openalex.org/W29779864","https://openalex.org/W144423133","https://openalex.org/W1592870802","https://openalex.org/W1601063618","https://openalex.org/W1963952972","https://openalex.org/W1967832728","https://openalex.org/W1968968087","https://openalex.org/W1973798273","https://openalex.org/W1973876456","https://openalex.org/W1977556410","https://openalex.org/W1980389572","https://openalex.org/W1981186391","https://openalex.org/W1983804343","https://openalex.org/W2006079840","https://openalex.org/W2015493040","https://openalex.org/W2017082263","https://openalex.org/W2040468230","https://openalex.org/W2043532538","https://openalex.org/W2044832480","https://openalex.org/W2059073003","https://openalex.org/W2063564964","https://openalex.org/W2067144619","https://openalex.org/W2070571588","https://openalex.org/W2083381199","https://openalex.org/W2085442947","https://openalex.org/W2103017472","https://openalex.org/W2108266886","https://openalex.org/W2118962220","https://openalex.org/W2120865735","https://openalex.org/W2123214754","https://openalex.org/W2127367545","https://openalex.org/W2128768066","https://openalex.org/W2130979840","https://openalex.org/W2134459829","https://openalex.org/W2134582937","https://openalex.org/W2137350216","https://openalex.org/W2138954682","https://openalex.org/W2143423915","https://openalex.org/W2145825942","https://openalex.org/W2152956039","https://openalex.org/W2159482845","https://openalex.org/W2165764599","https://openalex.org/W2166179294","https://openalex.org/W2167175306","https://openalex.org/W2168546553","https://openalex.org/W2169658834","https://openalex.org/W2171230529","https://openalex.org/W2409075727","https://openalex.org/W2912075946","https://openalex.org/W4285719527","https://openalex.org/W4294216483","https://openalex.org/W6635200387","https://openalex.org/W6644682428","https://openalex.org/W6714453948"],"related_works":["https://openalex.org/W1964572291","https://openalex.org/W4387948744","https://openalex.org/W1987520879","https://openalex.org/W184793361","https://openalex.org/W2352732738","https://openalex.org/W2123060905","https://openalex.org/W2559588208","https://openalex.org/W2581600691","https://openalex.org/W2183615490","https://openalex.org/W2028473472"],"abstract_inverted_index":{"microRNA":[0,57,80,109,155],"expression":[1,20,70,81,98,158],"and":[2,19,29,37,39,44,59,68,102,105,117,123,133,141,150,157],"sequence":[3,156],"analysis":[4,16,43,74,96,134,152],"database":[5,12,53],"(http://konulab.fen.bilkent.edu.tr/mirna/)":[6],"(mESAdb)":[7],"is":[8,27],"a":[9,31],"regularly":[10],"updated":[11],"for":[13,48,84,154],"the":[14,49,137],"multivariate":[15,95],"of":[17,21,79,86,97,108,121,130],"sequences":[18,58],"microRNAs":[22,87],"from":[23],"multiple":[24],"taxa.":[25],"mESAdb":[26,73,147],"modular":[28],"has":[30],"user":[32],"interface":[33],"implemented":[34],"in":[35],"PHP":[36],"JavaScript":[38],"coupled":[40],"with":[41,64,111],"statistical":[42],"visualization":[45],"packages":[46,126],"written":[47],"R":[50,125],"language.":[51],"The":[52,119],"primarily":[54],"comprises":[55],"mature":[56],"their":[60],"target":[61],"data,":[62],"along":[63],"selected":[65,88],"human,":[66],"mouse":[67],"zebrafish":[69],"data":[71,82,99,131,144],"sets.":[72],"modules":[75],"allow":[76],"(i)":[77],"mining":[78],"sets":[83,100,132,145],"subsets":[85,110],"manually":[89],"or":[90],"by":[91],"motif;":[92],"(ii)":[93],"pair-wise":[94],"within":[101],"between":[103],"taxa;":[104],"(iii)":[106],"association":[107],"annotation":[112],"databases,":[113],"HUGE":[114],"Navigator,":[115],"KEGG":[116],"GO.":[118],"use":[120],"existing":[122],"customized":[124],"facilitates":[127],"future":[128],"addition":[129],"tools.":[135],"Furthermore,":[136],"ability":[138],"to":[139],"upload":[140],"analyze":[142],"user-specified":[143],"makes":[146],"an":[148],"interactive":[149],"expandable":[151],"tool":[153],"data.":[159]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":7},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":3}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}