{"id":"https://openalex.org/W2118704022","doi":"https://doi.org/10.1093/nar/gkq1235","title":"Bovine Genome Database: integrated tools for genome annotation and discovery","display_name":"Bovine Genome Database: integrated tools for genome annotation and discovery","publication_year":2010,"publication_date":"2010-12-01","ids":{"openalex":"https://openalex.org/W2118704022","doi":"https://doi.org/10.1093/nar/gkq1235","mag":"2118704022","pmid":"https://pubmed.ncbi.nlm.nih.gov/21123190"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1235","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D830/18787119/gkq1235.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D830/18787119/gkq1235.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5101958950","display_name":"Christopher Childers","orcid":"https://orcid.org/0000-0002-1253-5550"},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christopher P. Childers","raw_affiliation_strings":["Department of Biology, Georgetown University, Washington, DC 20057, USA","Department of Biology, Georgetown University, Washington, DC 20057 USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057, USA","institution_ids":["https://openalex.org/I184565670"]},{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057 USA","institution_ids":["https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073533486","display_name":"Justin Reese","orcid":"https://orcid.org/0000-0002-2170-2250"},"institutions":[{"id":"https://openalex.org/I2801613365","display_name":"Mitchell Institute","ror":"https://ror.org/03ds72003","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2801613365"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Justin T. Reese","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","Texas A and. M University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A and. M University","institution_ids":["https://openalex.org/I2801613365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084313881","display_name":"Jaideep P. Sundaram","orcid":null},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jaideep P. Sundaram","raw_affiliation_strings":["Department of Biology, Georgetown University, Washington, DC 20057 and","GEORGETOWN UNIVERSITY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057 and","institution_ids":["https://openalex.org/I184565670"]},{"raw_affiliation_string":"GEORGETOWN UNIVERSITY","institution_ids":["https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012882924","display_name":"Donald C. Vile","orcid":"https://orcid.org/0009-0006-8660-1350"},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Donald C. Vile","raw_affiliation_strings":["Department of Biology, Georgetown University, Washington, DC 20057 and","GEORGETOWN UNIVERSITY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057 and","institution_ids":["https://openalex.org/I184565670"]},{"raw_affiliation_string":"GEORGETOWN UNIVERSITY","institution_ids":["https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112448525","display_name":"C. Michael Dickens","orcid":null},"institutions":[{"id":"https://openalex.org/I2801613365","display_name":"Mitchell Institute","ror":"https://ror.org/03ds72003","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2801613365"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. Michael Dickens","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","Texas A and. M University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A and. M University","institution_ids":["https://openalex.org/I2801613365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5050899822","display_name":"Kevin L. Childs","orcid":"https://orcid.org/0000-0002-3680-062X"},"institutions":[{"id":"https://openalex.org/I4210151202","display_name":"Plant (United States)","ror":"https://ror.org/05g223j58","country_code":"US","type":"company","lineage":["https://openalex.org/I4210151202"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kevin L. Childs","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","Plant Biology"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Plant Biology","institution_ids":["https://openalex.org/I4210151202"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5033315825","display_name":"Hanni Salih","orcid":null},"institutions":[{"id":"https://openalex.org/I2801613365","display_name":"Mitchell Institute","ror":"https://ror.org/03ds72003","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2801613365"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Hanni Salih","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","Texas A and. M University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A and. M University","institution_ids":["https://openalex.org/I2801613365"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107891822","display_name":"Anna K. Bennett","orcid":null},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Anna K. Bennett","raw_affiliation_strings":["Department of Biology, Georgetown University, Washington, DC 20057 and","GEORGETOWN UNIVERSITY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057 and","institution_ids":["https://openalex.org/I184565670"]},{"raw_affiliation_string":"GEORGETOWN UNIVERSITY","institution_ids":["https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014950784","display_name":"Darren E. Hagen","orcid":"https://orcid.org/0000-0001-8295-020X"},"institutions":[{"id":"https://openalex.org/I184565670","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60","country_code":"US","type":"education","lineage":["https://openalex.org/I184565670"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Darren E. Hagen","raw_affiliation_strings":["Department of Biology, Georgetown University, Washington, DC 20057 and","GEORGETOWN UNIVERSITY"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biology, Georgetown University, Washington, DC 20057 and","institution_ids":["https://openalex.org/I184565670"]},{"raw_affiliation_string":"GEORGETOWN UNIVERSITY","institution_ids":["https://openalex.org/I184565670"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006239806","display_name":"David L. Adelson","orcid":"https://orcid.org/0000-0003-2404-5636"},"institutions":[{"id":"https://openalex.org/I5681781","display_name":"The University of Adelaide","ror":"https://ror.org/00892tw58","country_code":"AU","type":"education","lineage":["https://openalex.org/I5681781"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["AU","US"],"is_corresponding":false,"raw_author_name":"David L. Adelson","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","*University of Adelaide"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"*University of Adelaide","institution_ids":["https://openalex.org/I5681781"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5114375171","display_name":"Christine G. Elsik","orcid":"https://orcid.org/0000-0002-4248-7713"},"institutions":[{"id":"https://openalex.org/I2801613365","display_name":"Mitchell Institute","ror":"https://ror.org/03ds72003","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I2801613365"]},{"id":"https://openalex.org/I91045830","display_name":"Texas A&M University","ror":"https://ror.org/01f5ytq51","country_code":"US","type":"education","lineage":["https://openalex.org/I91045830"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Christine G. Elsik","raw_affiliation_strings":["Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","Texas A and. M University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Animal Science, Texas A&M University, College Station, TX 77843, USA","institution_ids":["https://openalex.org/I91045830"]},{"raw_affiliation_string":"Texas A and. M University","institution_ids":["https://openalex.org/I2801613365"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":11,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.6671,"has_fulltext":true,"cited_by_count":35,"citation_normalized_percentile":{"value":0.9059526,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"39","issue":"suppl_1","first_page":"D830","last_page":"D834"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11468","display_name":"Genetic Mapping and Diversity in Plants and Animals","score":0.9962000250816345,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10594","display_name":"Genetic and phenotypic traits in livestock","score":0.9854999780654907,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/ensembl","display_name":"Ensembl","score":0.8608492016792297},{"id":"https://openalex.org/keywords/refseq","display_name":"RefSeq","score":0.7954807877540588},{"id":"https://openalex.org/keywords/bovine-genome","display_name":"Bovine genome","score":0.7335705757141113},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6897278428077698},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6713432669639587},{"id":"https://openalex.org/keywords/genome-browser","display_name":"Genome browser","score":0.6233815550804138},{"id":"https://openalex.org/keywords/pseudogene","display_name":"Pseudogene","score":0.5795600414276123},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5770159363746643},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.5668485760688782},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.565324068069458},{"id":"https://openalex.org/keywords/reference-genome","display_name":"Reference genome","score":0.5490867495536804},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.509963870048523},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5042837858200073},{"id":"https://openalex.org/keywords/gene-nomenclature","display_name":"Gene nomenclature","score":0.48112669587135315},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4586898982524872},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.3793078660964966},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3669082522392273},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.12637102603912354}],"concepts":[{"id":"https://openalex.org/C141674004","wikidata":"https://www.wikidata.org/wiki/Q1344256","display_name":"Ensembl","level":5,"score":0.8608492016792297},{"id":"https://openalex.org/C151810110","wikidata":"https://www.wikidata.org/wiki/Q7307074","display_name":"RefSeq","level":4,"score":0.7954807877540588},{"id":"https://openalex.org/C2776473694","wikidata":"https://www.wikidata.org/wiki/Q4950555","display_name":"Bovine genome","level":4,"score":0.7335705757141113},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6897278428077698},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6713432669639587},{"id":"https://openalex.org/C2781148417","wikidata":"https://www.wikidata.org/wiki/Q5533486","display_name":"Genome browser","level":5,"score":0.6233815550804138},{"id":"https://openalex.org/C34957205","wikidata":"https://www.wikidata.org/wiki/Q277338","display_name":"Pseudogene","level":4,"score":0.5795600414276123},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5770159363746643},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.5668485760688782},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.565324068069458},{"id":"https://openalex.org/C192953774","wikidata":"https://www.wikidata.org/wiki/Q7307127","display_name":"Reference genome","level":4,"score":0.5490867495536804},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.509963870048523},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5042837858200073},{"id":"https://openalex.org/C62177273","wikidata":"https://www.wikidata.org/wiki/Q5531556","display_name":"Gene nomenclature","level":4,"score":0.48112669587135315},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4586898982524872},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.3793078660964966},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3669082522392273},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.12637102603912354},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C58642233","wikidata":"https://www.wikidata.org/wiki/Q8269924","display_name":"Taxonomy (biology)","level":2,"score":0.0},{"id":"https://openalex.org/C514705636","wikidata":"https://www.wikidata.org/wiki/Q863247","display_name":"Nomenclature","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D002417","descriptor_name":"Cattle","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016415","descriptor_name":"Sequence Alignment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016678","descriptor_name":"Genome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkq1235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1235","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D830/18787119/gkq1235.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21123190","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21123190","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.946.4196","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.946.4196","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2010/11/30/nar.gkq1235.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.953.1130","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.953.1130","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/39/suppl_1/D830.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3013744","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013744","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1235","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1235","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D830/18787119/gkq1235.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320306114","display_name":"U.S. Department of Agriculture","ror":"https://ror.org/01na82s61"},{"id":"https://openalex.org/F4320310223","display_name":"Georgetown University","ror":"https://ror.org/05vzafd60"},{"id":"https://openalex.org/F4320313505","display_name":"Robert J. Kleberg, Jr. and Helen C. Kleberg Foundation","ror":"https://ror.org/05r5zfp34"},{"id":"https://openalex.org/F4320332299","display_name":"National Institute of Food and Agriculture","ror":"https://ror.org/05qx3fv49"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2118704022.pdf","grobid_xml":"https://content.openalex.org/works/W2118704022.grobid-xml"},"referenced_works_count":32,"referenced_works":["https://openalex.org/W8224450","https://openalex.org/W1585006589","https://openalex.org/W1740945043","https://openalex.org/W1767772592","https://openalex.org/W1903350925","https://openalex.org/W1981194976","https://openalex.org/W1985471440","https://openalex.org/W1986665419","https://openalex.org/W2047253404","https://openalex.org/W2060480089","https://openalex.org/W2067654926","https://openalex.org/W2088977533","https://openalex.org/W2096525273","https://openalex.org/W2104146295","https://openalex.org/W2106678197","https://openalex.org/W2118930999","https://openalex.org/W2127640118","https://openalex.org/W2141545183","https://openalex.org/W2145477956","https://openalex.org/W2146453000","https://openalex.org/W2154380613","https://openalex.org/W2155592392","https://openalex.org/W2158714788","https://openalex.org/W2159512882","https://openalex.org/W2162782320","https://openalex.org/W2163965551","https://openalex.org/W2164085656","https://openalex.org/W2170496993","https://openalex.org/W2404076265","https://openalex.org/W2918025614","https://openalex.org/W4214591481","https://openalex.org/W4231041617"],"related_works":["https://openalex.org/W3109437984","https://openalex.org/W2116418175","https://openalex.org/W4309908782","https://openalex.org/W1217705870","https://openalex.org/W2235368041","https://openalex.org/W2189508481","https://openalex.org/W2118704022","https://openalex.org/W1814949048","https://openalex.org/W2898598946","https://openalex.org/W1995653121"],"abstract_inverted_index":{"The":[0,83,103],"Bovine":[1,84],"Genome":[2,44],"Database":[3],"(BGD;":[4],"http://BovineGenome.org)":[5],"strives":[6],"to":[7,15,76,89,109,114,120,140,180,193,197],"improve":[8],"annotation":[9],"of":[10,98,152],"the":[11,17,29,55,90,96,110,141,149,153,201],"bovine":[12,56],"genome":[13,18,27],"and":[14,41,50,62,74,80,130,146,178,186],"integrate":[16],"sequence":[19],"with":[20,117],"other":[21],"genomics":[22],"data.":[23],"BGD":[24,91,111,142],"includes":[25],"GBrowse":[26],"browsers,":[28,45],"Apollo":[30,104],"Annotation":[31,105],"Editor,":[32],"a":[33,124,194],"quantitative":[34],"trait":[35],"loci":[36],"(QTL)":[37],"viewer,":[38],"BLAST":[39],"databases":[40],"gene":[42,64,121,133,162,165,171,189],"pages.":[43],"available":[46],"for":[47,95,144,159,183],"both":[48],"scaffold":[49],"chromosome":[51],"coordinate":[52],"systems,":[53],"display":[54,157],"Official":[57],"Gene":[58,155,173],"Set":[59],"(OGS),":[60],"RefSeq":[61],"Ensembl":[63],"models,":[65,163],"non-coding":[66],"RNA,":[67],"repeats,":[68],"pseudogenes,":[69],"single-nucleotide":[70],"polymorphism,":[71],"markers,":[72],"QTL":[73,85],"alignments":[75],"complementary":[77],"DNAs,":[78],"ESTs":[79],"protein":[81],"homologs.":[82],"viewer":[86],"is":[87,191],"connected":[88],"Chromosome":[92],"GBrowse,":[93],"allowing":[94],"identification":[97],"candidate":[99],"genes":[100],"underlying":[101],"QTL.":[102],"Editor":[106],"connects":[107],"directly":[108],"Chado":[112],"database":[113],"provide":[115],"researchers":[116],"remote":[118],"access":[119],"evidence":[122],"in":[123],"graphical":[125],"interface":[126],"that":[127],"allows":[128],"editing":[129],"creating":[131],"new":[132],"models.":[134],"Researchers":[135],"may":[136],"upload":[137],"their":[138],"annotations":[139],"server":[143],"review":[145],"integration":[147],"into":[148],"subsequent":[150],"release":[151],"OGS.":[154],"pages":[156],"information":[158],"individual":[160],"OGS":[161],"including":[164],"structure,":[166],"transcript":[167],"variants,":[168],"functional":[169],"descriptions,":[170],"symbols,":[172],"Ontology":[174],"terms,":[175],"annotator":[176],"comments":[177],"links":[179],"National":[181],"Center":[182],"Biotechnology":[184],"Information":[185],"Ensembl.":[187],"Each":[188],"page":[190,196],"linked":[192],"wiki":[195],"allow":[198],"input":[199],"from":[200],"research":[202],"community.":[203]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":2},{"year":2019,"cited_by_count":2},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":7},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":5}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
