{"id":"https://openalex.org/W2128807557","doi":"https://doi.org/10.1093/nar/gkq1168","title":"COMBREX: a project to accelerate the functional annotation of prokaryotic genomes","display_name":"COMBREX: a project to accelerate the functional annotation of prokaryotic genomes","publication_year":2010,"publication_date":"2010-11-21","ids":{"openalex":"https://openalex.org/W2128807557","doi":"https://doi.org/10.1093/nar/gkq1168","mag":"2128807557","pmid":"https://pubmed.ncbi.nlm.nih.gov/21097892"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1168","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1168","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkq1168","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5091034547","display_name":"Richard J. Roberts","orcid":"https://orcid.org/0000-0002-4348-0169"},"institutions":[{"id":"https://openalex.org/I111088046","display_name":"Boston University","ror":"https://ror.org/05qwgg493","country_code":"US","type":"education","lineage":["https://openalex.org/I111088046"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"R. J. Roberts","raw_affiliation_strings":["Bioinformatics Program, Boston University, Boston, MA 02215, USA. roberts@neb.com"],"affiliations":[{"raw_affiliation_string":"Bioinformatics Program, Boston University, Boston, MA 02215, USA. roberts@neb.com","institution_ids":["https://openalex.org/I111088046"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5025754368","display_name":"Yi-Chien Chang","orcid":"https://orcid.org/0009-0003-7152-2578"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Y.-C. Chang","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111956223","display_name":"Zhenjun Hu","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Z. Hu","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061721109","display_name":"John Rachlin","orcid":null},"institutions":[{"id":"https://openalex.org/I97750245","display_name":"Software (Spain)","ror":"https://ror.org/02ethns06","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210087817","https://openalex.org/I97750245"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"J. N. Rachlin","raw_affiliation_strings":["Diatom Software LLC"],"affiliations":[{"raw_affiliation_string":"Diatom Software LLC","institution_ids":["https://openalex.org/I97750245"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087710962","display_name":"Brian P. Anton","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140416","display_name":"New England Biolabs (China)","ror":"https://ror.org/03nb3ch98","country_code":"CN","type":"company","lineage":["https://openalex.org/I115020962","https://openalex.org/I4210140416"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"B. P. Anton","raw_affiliation_strings":["New England Biolabs","Boston University"],"affiliations":[{"raw_affiliation_string":"New England Biolabs","institution_ids":["https://openalex.org/I4210140416"]},{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017174409","display_name":"Revonda M. Pokrzywa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. M. Pokrzywa","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109229090","display_name":"Han Pil Choi","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"H.-P. Choi","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006308455","display_name":"Lina L. Faller","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"L. L. Faller","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5051966071","display_name":"Jyotsna Guleria","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"J. Guleria","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022882268","display_name":"Genevieve Housman","orcid":"https://orcid.org/0000-0002-3482-7511"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"G. Housman","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047787844","display_name":"Niels Klitgord","orcid":"https://orcid.org/0000-0001-8886-3334"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"N. Klitgord","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061411446","display_name":"Varun Mazumdar","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"V. Mazumdar","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5034213527","display_name":"Mark G. McGettrick","orcid":null},"institutions":[{"id":"https://openalex.org/I97750245","display_name":"Software (Spain)","ror":"https://ror.org/02ethns06","country_code":"ES","type":"company","lineage":["https://openalex.org/I4210087817","https://openalex.org/I97750245"]}],"countries":["ES"],"is_corresponding":false,"raw_author_name":"M. G. McGettrick","raw_affiliation_strings":["Diatom Software LLC"],"affiliations":[{"raw_affiliation_string":"Diatom Software LLC","institution_ids":["https://openalex.org/I97750245"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007853243","display_name":"Lais Osmani","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"L. Osmani","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084771980","display_name":"Rajeswari Swaminathan","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"R. Swaminathan","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011839332","display_name":"Kevin Tao","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"K. R. Tao","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088082821","display_name":"Stan Letovsky","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"S. Letovsky","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008458536","display_name":"Dennis Vitkup","orcid":"https://orcid.org/0000-0003-4259-8162"},"institutions":[{"id":"https://openalex.org/I78577930","display_name":"Columbia University","ror":"https://ror.org/00hj8s172","country_code":"US","type":"education","lineage":["https://openalex.org/I78577930"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"D. Vitkup","raw_affiliation_strings":["Columbia University"],"affiliations":[{"raw_affiliation_string":"Columbia University","institution_ids":["https://openalex.org/I78577930"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5043439049","display_name":"Daniel Segr\u00e8","orcid":"https://orcid.org/0000-0003-4859-1914"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"D. Segre","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010384159","display_name":"Steven L. Salzberg","orcid":"https://orcid.org/0000-0002-8859-7432"},"institutions":[{"id":"https://openalex.org/I66946132","display_name":"University of Maryland, College Park","ror":"https://ror.org/047s2c258","country_code":"US","type":"education","lineage":["https://openalex.org/I66946132"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. L. Salzberg","raw_affiliation_strings":["University of Maryland, College Park"],"affiliations":[{"raw_affiliation_string":"University of Maryland, College Park","institution_ids":["https://openalex.org/I66946132"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027378666","display_name":"Charles DeLisi","orcid":"https://orcid.org/0000-0002-5847-1599"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"C. Delisi","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058725359","display_name":"Mart\u00edn Steffen","orcid":"https://orcid.org/0000-0002-7853-7364"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"M. Steffen","raw_affiliation_strings":["Boston University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5005103749","display_name":"Simon Kasif","orcid":"https://orcid.org/0000-0003-3297-9914"},"institutions":[{"id":"https://openalex.org/I2801851002","display_name":"Harvard University Press","ror":"https://ror.org/006v7bf86","country_code":"US","type":"other","lineage":["https://openalex.org/I136199984","https://openalex.org/I2801851002"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Kasif","raw_affiliation_strings":["Boston University","Harvard University"],"affiliations":[{"raw_affiliation_string":"Boston University","institution_ids":[]},{"raw_affiliation_string":"Harvard University","institution_ids":["https://openalex.org/I2801851002"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":23,"corresponding_author_ids":["https://openalex.org/A5091034547"],"corresponding_institution_ids":["https://openalex.org/I111088046"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.5686,"has_fulltext":false,"cited_by_count":60,"citation_normalized_percentile":{"value":0.93532137,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"39","issue":"Database","first_page":"D11","last_page":"D14"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994999766349792,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8841917514801025},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7838742733001709},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.6554744839668274},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.618541955947876},{"id":"https://openalex.org/keywords/mechanism","display_name":"Mechanism (biology)","score":0.5653027296066284},{"id":"https://openalex.org/keywords/genome-project","display_name":"Genome project","score":0.5101302266120911},{"id":"https://openalex.org/keywords/bacterial-genome-size","display_name":"Bacterial genome size","score":0.43511515855789185},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2984877824783325},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2618240714073181},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.11055603623390198}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8841917514801025},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7838742733001709},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.6554744839668274},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.618541955947876},{"id":"https://openalex.org/C89611455","wikidata":"https://www.wikidata.org/wiki/Q6804646","display_name":"Mechanism (biology)","level":2,"score":0.5653027296066284},{"id":"https://openalex.org/C89566754","wikidata":"https://www.wikidata.org/wiki/Q2273828","display_name":"Genome project","level":4,"score":0.5101302266120911},{"id":"https://openalex.org/C3742359","wikidata":"https://www.wikidata.org/wiki/Q4839988","display_name":"Bacterial genome size","level":4,"score":0.43511515855789185},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2984877824783325},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2618240714073181},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.11055603623390198},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C111472728","wikidata":"https://www.wikidata.org/wiki/Q9471","display_name":"Epistemology","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016680","descriptor_name":"Genome, Bacterial","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020745","descriptor_name":"Genome, Archaeal","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D058977","descriptor_name":"Molecular Sequence Annotation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkq1168","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1168","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21097892","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21097892","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:null:2144/39164","is_oa":true,"landing_page_url":"http://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=LinksAMR&KeyUT=WOS:000285831700003&DestLinkType=FullRecord&DestApp=ALL_WOS&UsrCustomerID=6e74115fe3da270499c3d65c9b17d654","pdf_url":null,"source":{"id":"https://openalex.org/S4306402384","display_name":"OpenBU (Boston University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I111088046","host_organization_name":"Boston University","host_organization_lineage":["https://openalex.org/I111088046"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":null,"raw_type":"Article"},{"id":"pmh:oai:open.bu.edu:2144/3036","is_oa":false,"landing_page_url":"https://hdl.handle.net/2144/3036","pdf_url":null,"source":{"id":"https://openalex.org/S4306402183","display_name":"OpenBU/Boston University Institutional Repository (Boston University)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I111088046","host_organization_name":"Boston University","host_organization_lineage":["https://openalex.org/I111088046"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:open.bu.edu:2144/39164","is_oa":true,"landing_page_url":"https://hdl.handle.net/2144/39164","pdf_url":null,"source":null,"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:3013729","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013729","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1168","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1168","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals","score":0.41999998688697815}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"}],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":16,"referenced_works":["https://openalex.org/W1971403296","https://openalex.org/W1990203942","https://openalex.org/W2017608260","https://openalex.org/W2053636710","https://openalex.org/W2054058144","https://openalex.org/W2060797027","https://openalex.org/W2061657565","https://openalex.org/W2071031214","https://openalex.org/W2107903949","https://openalex.org/W2117466809","https://openalex.org/W2124410686","https://openalex.org/W2139488145","https://openalex.org/W2141356165","https://openalex.org/W2772934464","https://openalex.org/W4211208250","https://openalex.org/W4249435950"],"related_works":["https://openalex.org/W1989895641","https://openalex.org/W1760213857","https://openalex.org/W3044943847","https://openalex.org/W2467039083","https://openalex.org/W3009070426","https://openalex.org/W4200520333","https://openalex.org/W1976142521","https://openalex.org/W2105742081","https://openalex.org/W2044734766","https://openalex.org/W2149109523"],"abstract_inverted_index":{"COMBREX":[0],"(http://combrex.bu.edu)":[1],"is":[2],"a":[3,22,32],"project":[4],"to":[5,37,49],"increase":[6],"the":[7,10,40],"speed":[8],"of":[9,13,21,24,42],"functional":[11,25],"annotation":[12],"new":[14],"bacterial":[15],"and":[16,31],"archaeal":[17],"genomes.":[18],"It":[19],"consists":[20],"database":[23],"predictions":[26],"produced":[27],"by":[28],"computational":[29],"biologists":[30],"mechanism":[33],"for":[34,39],"experimental":[35],"biochemists":[36],"bid":[38],"validation":[41],"those":[43],"predictions.":[44],"Small":[45],"grants":[46],"are":[47],"available":[48],"support":[50],"successful":[51],"bids.":[52]},"counts_by_year":[{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":6},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":10}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
