{"id":"https://openalex.org/W2916247567","doi":"https://doi.org/10.1093/nar/gkq1132","title":"The mouse Gene Expression Database (GXD): 2011 update","display_name":"The mouse Gene Expression Database (GXD): 2011 update","publication_year":2010,"publication_date":"2010-11-09","ids":{"openalex":"https://openalex.org/W2916247567","doi":"https://doi.org/10.1093/nar/gkq1132","mag":"2916247567","pmid":"https://pubmed.ncbi.nlm.nih.gov/21062809"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1132","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1132","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D835/7631208/gkq1132.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D835/7631208/gkq1132.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5023247692","display_name":"Jacqueline H. Finger","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J. H. Finger","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012025063","display_name":"Constance M. Smith","orcid":"https://orcid.org/0000-0001-8915-8557"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"C. M. Smith","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079178196","display_name":"Terry F. Hayamizu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. F. Hayamizu","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5014883933","display_name":"Ingeborg J. McCright","orcid":null},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I. J. McCright","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5006382524","display_name":"Janan T. Eppig","orcid":"https://orcid.org/0000-0003-1652-8072"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. T. Eppig","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038370465","display_name":"James A. Kadin","orcid":"https://orcid.org/0000-0002-7644-3743"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. A. Kadin","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062064598","display_name":"Joel E. Richardson","orcid":"https://orcid.org/0000-0003-3342-5753"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. E. Richardson","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5070528752","display_name":"Martin Ringwald","orcid":"https://orcid.org/0000-0002-5696-5421"},"institutions":[{"id":"https://openalex.org/I4210115256","display_name":"Jackson Laboratory","ror":"https://ror.org/021sy4w91","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210115256"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Ringwald","raw_affiliation_strings":["The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA"],"affiliations":[{"raw_affiliation_string":"The Jackson Laboratory, 600 Main Street, Bar Harbor, ME 04609, USA","institution_ids":["https://openalex.org/I4210115256"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5023247692"],"corresponding_institution_ids":["https://openalex.org/I4210115256"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.0799,"has_fulltext":true,"cited_by_count":81,"citation_normalized_percentile":{"value":0.972892,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"39","issue":"Database","first_page":"D835","last_page":"D841"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9891999959945679,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9811999797821045,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9484000205993652,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9425472617149353},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.599103569984436},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.551943302154541},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.547743558883667},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.46026450395584106},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.41879579424858093}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9425472617149353},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.599103569984436},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.551943302154541},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.547743558883667},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.46026450395584106},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.41879579424858093},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015870","descriptor_name":"Gene Expression","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000196","qualifier_name":"embryology","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":"Q000254","qualifier_name":"growth & development","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkq1132","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1132","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D835/7631208/gkq1132.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21062809","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21062809","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013713","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013713","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1132","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1132","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D835/7631208/gkq1132.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.4099999964237213,"id":"https://metadata.un.org/sdg/17","display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337364","display_name":"National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"},{"id":"https://openalex.org/F4320337611","display_name":"Eunice Kennedy Shriver National Institute of Child Health and Human Development","ror":"https://ror.org/04byxyr05"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2916247567.pdf","grobid_xml":"https://content.openalex.org/works/W2916247567.grobid-xml"},"referenced_works_count":41,"referenced_works":["https://openalex.org/W76145344","https://openalex.org/W1236321187","https://openalex.org/W1511551280","https://openalex.org/W1772573515","https://openalex.org/W1984996211","https://openalex.org/W1985738984","https://openalex.org/W1985901090","https://openalex.org/W1986944049","https://openalex.org/W1989127872","https://openalex.org/W1994621739","https://openalex.org/W2014483037","https://openalex.org/W2016707082","https://openalex.org/W2024584484","https://openalex.org/W2036314401","https://openalex.org/W2045512378","https://openalex.org/W2060364343","https://openalex.org/W2071617014","https://openalex.org/W2073883677","https://openalex.org/W2082689543","https://openalex.org/W2086948271","https://openalex.org/W2092223956","https://openalex.org/W2107580398","https://openalex.org/W2108671185","https://openalex.org/W2116423958","https://openalex.org/W2123375975","https://openalex.org/W2123491442","https://openalex.org/W2136887407","https://openalex.org/W2156443053","https://openalex.org/W2156710255","https://openalex.org/W2163685645","https://openalex.org/W2168005921","https://openalex.org/W2168546553","https://openalex.org/W2172196250","https://openalex.org/W2402793346","https://openalex.org/W2772934464","https://openalex.org/W2915642007","https://openalex.org/W2918025614","https://openalex.org/W4210430020","https://openalex.org/W4211208250","https://openalex.org/W4249435950","https://openalex.org/W4320800138"],"related_works":["https://openalex.org/W2003932708","https://openalex.org/W2284877871","https://openalex.org/W2138102289","https://openalex.org/W1967424056","https://openalex.org/W868043274","https://openalex.org/W2034625591","https://openalex.org/W3032874291","https://openalex.org/W2005057264","https://openalex.org/W2363156284","https://openalex.org/W2415025170"],"abstract_inverted_index":{"The":[0,78],"Gene":[1],"Expression":[2],"Database":[3],"(GXD)":[4],"is":[5,137],"a":[6],"community":[7],"resource":[8],"of":[9,18,73],"mouse":[10,34],"developmental":[11],"expression":[12,19,29,132],"information.":[13],"GXD":[14,38,81,102,109,136],"integrates":[15],"different":[16,33],"types":[17],"data":[20,41,79,93,96,110,118],"at":[21,147],"the":[22,43,85,105,108,115,140],"transcript":[23],"and":[24,27,36,56,90,99,117,128],"protein":[25],"level":[26],"captures":[28],"information":[30],"from":[31,84,87,91],"many":[32,59],"strains":[35],"mutants.":[37],"places":[39],"these":[40,75],"in":[42,80],"larger":[44],"biological":[45],"context":[46],"through":[47,139],"integration":[48],"with":[49,58],"other":[50,60,131],"Mouse":[51],"Genome":[52],"Informatics":[53],"(MGI)":[54],"resources":[55,133],"interconnections":[57],"databases.":[61],"Web-based":[62],"query":[63],"forms":[64],"support":[65],"simple":[66],"or":[67,145],"complex":[68],"searches":[69],"that":[70],"take":[71],"advantage":[72],"all":[74],"integrated":[76],"data.":[77],"are":[82,97],"obtained":[83],"literature,":[86],"individual":[88],"laboratories,":[89],"large-scale":[92],"providers.":[94],"All":[95],"annotated":[98],"reviewed":[100],"by":[101],"curators.":[103],"Since":[104],"last":[106],"report,":[107],"content":[111],"has":[112],"increased":[113],"significantly,":[114],"interface":[116],"displays":[119],"have":[120],"been":[121],"improved,":[122],"new":[123],"querying":[124],"capabilities":[125],"were":[126,134],"implemented,":[127],"links":[129],"to":[130],"added.":[135],"available":[138],"MGI":[141],"web":[142],"site":[143],"(www.informatics.jax.org),":[144],"directly":[146],"www.informatics.jax.org/expression.shtml.":[148]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2020,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":13},{"year":2013,"cited_by_count":16},{"year":2012,"cited_by_count":20}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
