{"id":"https://openalex.org/W1966952999","doi":"https://doi.org/10.1093/nar/gkq1102","title":"Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource","display_name":"Community cyberinfrastructure for Advanced Microbial Ecology Research and Analysis: the CAMERA resource","publication_year":2010,"publication_date":"2010-11-02","ids":{"openalex":"https://openalex.org/W1966952999","doi":"https://doi.org/10.1093/nar/gkq1102","mag":"1966952999","pmid":"https://pubmed.ncbi.nlm.nih.gov/21045053"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1102","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D546/7629255/gkq1102.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D546/7629255/gkq1102.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5065189097","display_name":"Sheng Sun","orcid":"https://orcid.org/0000-0002-2895-1153"},"institutions":[{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"S. Sun","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446, California 92093-5004, USA. s2sun@ucsd.edu","The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446, California 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446, California 92093-5004, USA. s2sun@ucsd.edu","institution_ids":["https://openalex.org/I36258959"]},{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446, California 92093-5004, USA","institution_ids":["https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5085785893","display_name":"Jiefu Chen","orcid":"https://orcid.org/0000-0001-9940-7043"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Chen","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5027145422","display_name":"Weizhong Li","orcid":"https://orcid.org/0000-0003-1804-9403"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"W. Li","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5028701796","display_name":"\u0130lkay Alt\u0131nta\u015f","orcid":"https://orcid.org/0000-0002-2196-0305"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I. Altintas","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109150818","display_name":"Abel W. Lin","orcid":"https://orcid.org/0009-0008-3954-0238"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. Lin","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110338399","display_name":"S Peltier","orcid":null},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Peltier","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5080155102","display_name":"Karen Stocks","orcid":"https://orcid.org/0000-0002-1282-300X"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Stocks","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049116965","display_name":"Eric E. Allen","orcid":"https://orcid.org/0000-0002-1229-8794"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. E. Allen","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109030997","display_name":"MH Ellisman","orcid":null},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. Ellisman","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076014872","display_name":"Jeffrey S. Grethe","orcid":"https://orcid.org/0000-0001-5212-7052"},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Grethe","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5113578406","display_name":"John Wooley","orcid":null},"institutions":[{"id":"https://openalex.org/I2802406489","display_name":"Center for Information Technology Research in the Interest of Society","ror":"https://ror.org/00zv0wd17","country_code":"US","type":"facility","lineage":["https://openalex.org/I2802406489"]},{"id":"https://openalex.org/I36258959","display_name":"University of California San Diego","ror":"https://ror.org/0168r3w48","country_code":"US","type":"education","lineage":["https://openalex.org/I36258959"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Wooley","raw_affiliation_strings":["The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"The CAMERA Project, Center for Research on Biological Systems and California Institute of Telecommunication and Information Technology, University of California San Diego, 9500 Gilman Drive, Mail Code 0446 92093-5004, USA","institution_ids":["https://openalex.org/I2802406489","https://openalex.org/I36258959"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":11,"corresponding_author_ids":["https://openalex.org/A5065189097"],"corresponding_institution_ids":["https://openalex.org/I36258959"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":93.8028,"has_fulltext":true,"cited_by_count":321,"citation_normalized_percentile":{"value":0.99975472,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":100},"biblio":{"volume":"39","issue":"Database","first_page":"D546","last_page":"D551"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},"topics":[{"id":"https://openalex.org/T11986","display_name":"Scientific Computing and Data Management","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1802","display_name":"Information Systems and Management"},"field":{"id":"https://openalex.org/fields/18","display_name":"Decision Sciences"},"domain":{"id":"https://openalex.org/domains/2","display_name":"Social Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9972000122070312,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9940000176429749,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/metadata","display_name":"Metadata","score":0.8977893590927124},{"id":"https://openalex.org/keywords/cyberinfrastructure","display_name":"Cyberinfrastructure","score":0.8970937728881836},{"id":"https://openalex.org/keywords/metagenomics","display_name":"Metagenomics","score":0.7573240995407104},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5832597017288208},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.575757622718811},{"id":"https://openalex.org/keywords/microbial-ecology","display_name":"Microbial ecology","score":0.5007867813110352},{"id":"https://openalex.org/keywords/data-science","display_name":"Data science","score":0.47593358159065247},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4623907804489136},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4415706992149353},{"id":"https://openalex.org/keywords/data-curation","display_name":"Data curation","score":0.42747819423675537},{"id":"https://openalex.org/keywords/citizen-science","display_name":"Citizen science","score":0.4265858829021454},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.3556221127510071},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.32641127705574036},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.09501352906227112}],"concepts":[{"id":"https://openalex.org/C93518851","wikidata":"https://www.wikidata.org/wiki/Q180160","display_name":"Metadata","level":2,"score":0.8977893590927124},{"id":"https://openalex.org/C2776397876","wikidata":"https://www.wikidata.org/wiki/Q1450531","display_name":"Cyberinfrastructure","level":2,"score":0.8970937728881836},{"id":"https://openalex.org/C15151743","wikidata":"https://www.wikidata.org/wiki/Q903778","display_name":"Metagenomics","level":3,"score":0.7573240995407104},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5832597017288208},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.575757622718811},{"id":"https://openalex.org/C69562835","wikidata":"https://www.wikidata.org/wiki/Q3054637","display_name":"Microbial ecology","level":3,"score":0.5007867813110352},{"id":"https://openalex.org/C2522767166","wikidata":"https://www.wikidata.org/wiki/Q2374463","display_name":"Data science","level":1,"score":0.47593358159065247},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4623907804489136},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4415706992149353},{"id":"https://openalex.org/C91632574","wikidata":"https://www.wikidata.org/wiki/Q15088675","display_name":"Data curation","level":2,"score":0.42747819423675537},{"id":"https://openalex.org/C197352329","wikidata":"https://www.wikidata.org/wiki/Q1093434","display_name":"Citizen science","level":2,"score":0.4265858829021454},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.3556221127510071},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.32641127705574036},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.09501352906227112},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.0},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.0},{"id":"https://openalex.org/C523546767","wikidata":"https://www.wikidata.org/wiki/Q10876","display_name":"Bacteria","level":2,"score":0.0}],"mesh":[{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004777","descriptor_name":"Environment","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054892","descriptor_name":"Metagenome","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056186","descriptor_name":"Metagenomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkq1102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1102","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D546/7629255/gkq1102.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21045053","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21045053","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.293.2182","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.293.2182","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/f8/06/Nucleic_Acids_Res_2011_Jan_2_39(Database_issue)_D546-D551.tar.gz","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.912.6091","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.912.6091","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/39/suppl_1/D546.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.919.441","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.919.441","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2010/11/02/nar.gkq1102.full.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3013694","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013694","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1102","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1102","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D546/7629255/gkq1102.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.5099999904632568,"id":"https://metadata.un.org/sdg/9"}],"awards":[{"id":"https://openalex.org/G5155262972","display_name":"MANAGEMENT OF THE DEVELOPMENT OF LOGIC BASED DATA FEDERATION SOFTWARE","funder_award_id":"FC02-01ER25486","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G5872208256","display_name":"SDCI NMI Improvement: Development of Kepler CORE -- A Comprehensive, Open, Robust, and Extensible Scientific Workflow Infrastructure","funder_award_id":"0722079","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G7914607782","display_name":null,"funder_award_id":"DE-FC02-01ER25486","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G82760813","display_name":null,"funder_award_id":"OCI-0722079","funder_id":"https://openalex.org/F4320306084","funder_display_name":"U.S. Department of Energy"},{"id":"https://openalex.org/G8414727384","display_name":null,"funder_award_id":"OCI-0722079","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320306084","display_name":"U.S. Department of Energy","ror":"https://ror.org/01bj3aw27"},{"id":"https://openalex.org/F4320306202","display_name":"Gordon and Betty Moore Foundation","ror":"https://ror.org/006wxqw41"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337375","display_name":"National Center for Research Resources","ror":"https://ror.org/04pw6fb54"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W1966952999.pdf","grobid_xml":"https://content.openalex.org/works/W1966952999.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W1236321187","https://openalex.org/W1983833794","https://openalex.org/W1989348205","https://openalex.org/W1990453950","https://openalex.org/W1991056282","https://openalex.org/W1999113425","https://openalex.org/W2006465310","https://openalex.org/W2042893247","https://openalex.org/W2091922579","https://openalex.org/W2095200684","https://openalex.org/W2096525273","https://openalex.org/W2108166985","https://openalex.org/W2116895571","https://openalex.org/W2133626798","https://openalex.org/W2141885858","https://openalex.org/W2152885278","https://openalex.org/W2154513453","https://openalex.org/W2156296225","https://openalex.org/W2171437346","https://openalex.org/W2914037595","https://openalex.org/W4210623056","https://openalex.org/W4231041617"],"related_works":["https://openalex.org/W273500195","https://openalex.org/W2043019925","https://openalex.org/W4236056781","https://openalex.org/W4293768956","https://openalex.org/W2773781927","https://openalex.org/W2051667621","https://openalex.org/W1584410718","https://openalex.org/W2466475499","https://openalex.org/W3037883442","https://openalex.org/W2377830324"],"abstract_inverted_index":{"The":[0],"Community":[1],"Cyberinfrastructure":[2],"for":[3,24,118,173,187,198],"Advanced":[4],"Microbial":[5],"Ecology":[6],"Research":[7],"and":[8,15,29,43,90,108,120,126,128,142,155,162,182,196,202,205],"Analysis":[9],"(CAMERA,":[10],"http://camera.calit2.net/)":[11],"is":[12,96],"a":[13,21,55,110,191],"database":[14],"associated":[16],"computational":[17],"infrastructure":[18],"that":[19],"provides":[20,146],"single":[22],"system":[23],"depositing,":[25],"locating,":[26],"analyzing,":[27,200],"visualizing":[28],"sharing":[30],"data":[31,50,125,141,147,157,164,180],"about":[32],"microbial":[33],"biology":[34],"through":[35],"an":[36],"advanced":[37],"web-based":[38],"analysis":[39],"portal.":[40],"CAMERA":[41,95,133,144,189],"collects":[42],"links":[44],"metadata":[45,81,127],"relevant":[46],"to":[47,60,79,131,140,150,153,158],"environmental":[48,92],"metagenome":[49,204],"sets":[51],"with":[52,98],"annotation":[53],"in":[54,115],"semantically-aware":[56],"environment":[57],"allowing":[58],"users":[59,76],"write":[61],"expressive":[62],"semantic":[63],"queries":[64],"against":[65],"the":[66,70,73,99,103,113,123,132],"database.":[67],"To":[68,135],"meet":[69],"needs":[71],"of":[72,122,176,185,194],"research":[74],"community,":[75],"are":[77],"able":[78],"query":[80],"categories":[82],"such":[83,166],"as":[84,167],"habitat,":[85],"sample":[86],"type,":[87],"time,":[88],"location":[89],"other":[91,159],"physicochemical":[93],"parameters.":[94],"compliant":[97],"standards":[100,117],"promulgated":[101],"by":[102],"Genomic":[104],"Standards":[105],"Consortium":[106],"(GSC),":[107],"sustains":[109],"role":[111],"within":[112],"GSC":[114],"extending":[116],"content":[119],"format":[121],"metagenomic":[124],"its":[129],"submission":[130,148,175],"repository.":[134],"ensure":[136],"wide,":[137],"ready":[138],"access":[139],"annotation,":[143],"also":[145],"tools":[149,195],"allow":[151],"researchers":[152],"share":[154],"forward":[156],"metagenomics":[160],"sites":[161],"community":[163],"archives":[165],"GenBank.":[168],"It":[169],"has":[170],"multiple":[171],"interfaces":[172],"easy":[174],"large":[177],"or":[178],"complex":[179],"sets,":[181],"supports":[183],"pre-registration":[184],"samples":[186],"sequencing.":[188],"integrates":[190],"growing":[192],"list":[193],"viewers":[197],"querying,":[199],"annotating":[201],"comparing":[203],"genome":[206],"data.":[207]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":5},{"year":2021,"cited_by_count":4},{"year":2020,"cited_by_count":17},{"year":2019,"cited_by_count":7},{"year":2018,"cited_by_count":13},{"year":2017,"cited_by_count":8},{"year":2016,"cited_by_count":20},{"year":2015,"cited_by_count":46},{"year":2014,"cited_by_count":57},{"year":2013,"cited_by_count":62},{"year":2012,"cited_by_count":45}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
