{"id":"https://openalex.org/W2080018357","doi":"https://doi.org/10.1093/nar/gkq1094","title":"miRGator v2.0 : an integrated system for functional investigation of microRNAs","display_name":"miRGator v2.0 : an integrated system for functional investigation of microRNAs","publication_year":2010,"publication_date":"2010-11-09","ids":{"openalex":"https://openalex.org/W2080018357","doi":"https://doi.org/10.1093/nar/gkq1094","mag":"2080018357","pmid":"https://pubmed.ncbi.nlm.nih.gov/21062822"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1094","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkq1094","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5004903584","display_name":"Seungho Cho","orcid":"https://orcid.org/0000-0001-7926-5674"},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"S. Cho","raw_affiliation_strings":["Ewha Research Center for Systems Biology, Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology, Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750, Korea","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084375776","display_name":"Yukyung Jun","orcid":"https://orcid.org/0000-0002-4025-7164"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Y. Jun","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100444546","display_name":"Sanghyun Lee","orcid":"https://orcid.org/0000-0002-0395-207X"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Lee","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5044174536","display_name":"H. Choi","orcid":"https://orcid.org/0009-0001-0348-0973"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"H.-S. Choi","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5031979012","display_name":"Sung\u2010Chul Jung","orcid":"https://orcid.org/0000-0002-3174-8965"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Jung","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5070678704","display_name":"Yeongjun Jang","orcid":"https://orcid.org/0000-0002-7816-3278"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Y. Jang","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110589983","display_name":"Chang Ho Park","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"C. Park","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058401046","display_name":"Sangok Kim","orcid":"https://orcid.org/0000-0002-5526-798X"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Kim","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100444546","display_name":"Sanghyun Lee","orcid":"https://orcid.org/0000-0002-0395-207X"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Lee","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5050266680","display_name":"Wankyu Kim","orcid":"https://orcid.org/0000-0003-3181-0594"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"W. Kim","raw_affiliation_strings":["Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA"],"affiliations":[{"raw_affiliation_string":"Ewha Research Center for Systems Biology (ERCSB), Ewha Womans University, 11-1 Daehyun-dong, Seodaemun-gu, Seoul 120-750 and 2 Korean Bioinformation Center (KOBIC), 52 Eoeun-dong, Yuseong-gu, Daejeon, 305-806, KOREA","institution_ids":["https://openalex.org/I138925566"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5004903584"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.6123,"has_fulltext":false,"cited_by_count":57,"citation_normalized_percentile":{"value":0.926408,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"39","issue":"Database","first_page":"D158","last_page":"D162"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9983999729156494,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.8808751702308655},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8173952102661133},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5768376588821411},{"id":"https://openalex.org/keywords/gene-silencing","display_name":"Gene silencing","score":0.5478522181510925},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.5405295491218567},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5398667454719543},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.539669394493103},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.485777884721756},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.47992831468582153},{"id":"https://openalex.org/keywords/phenotype","display_name":"Phenotype","score":0.4624977111816406}],"concepts":[{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.8808751702308655},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8173952102661133},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5768376588821411},{"id":"https://openalex.org/C119056186","wikidata":"https://www.wikidata.org/wiki/Q1431332","display_name":"Gene silencing","level":3,"score":0.5478522181510925},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.5405295491218567},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5398667454719543},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.539669394493103},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.485777884721756},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.47992831468582153},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.4624977111816406}],"mesh":[{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq1094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1094","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21062822","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21062822","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013691","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013691","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:http://repository.kribb.re.kr:8080/:201005/10172","is_oa":false,"landing_page_url":"http://doi.org/10.1093/nar/gkq1094","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"/dspace/upload/original/9934.pdf","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1094","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1094","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":19,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W2000491596","https://openalex.org/W2013444425","https://openalex.org/W2026570544","https://openalex.org/W2044832480","https://openalex.org/W2048296798","https://openalex.org/W2050271685","https://openalex.org/W2050869737","https://openalex.org/W2103017472","https://openalex.org/W2108671185","https://openalex.org/W2128768066","https://openalex.org/W2149785901","https://openalex.org/W2153210075","https://openalex.org/W2155874171","https://openalex.org/W2156443053","https://openalex.org/W2162674813","https://openalex.org/W2165674132","https://openalex.org/W2167534419","https://openalex.org/W2168546553"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2050308539","https://openalex.org/W2565797512","https://openalex.org/W2026936876","https://openalex.org/W2128583238","https://openalex.org/W2134405083","https://openalex.org/W2034500416","https://openalex.org/W2034377088","https://openalex.org/W1982193071"],"abstract_inverted_index":{"miRGator":[0,29,176],"is":[1,113],"an":[2,170],"integrated":[3],"database":[4,182],"of":[5,23,28,47,106],"microRNA":[6],"(miRNA)-associated":[7],"gene":[8,53,79],"expression,":[9],"target":[10],"prediction,":[11],"disease":[12,162],"association":[13],"and":[14,50,61,67,82,97,111,146,161,187],"genomic":[15],"annotation,":[16],"which":[17],"aims":[18],"to":[19,183],"facilitate":[20],"functional":[21],"investigation":[22],"miRNAs.":[24,142],"The":[25,175],"recent":[26],"version":[27],"v2.0":[30,177],"contains":[31],"information":[32],"about":[33],"(i)":[34],"human":[35],"miRNA":[36,59,65,74,125,131,144,150,185],"expression":[37,45,54,75,80,85,145,153,186],"profiles":[38,46,55,81,86,148],"under":[39,56],"various":[40,159],"experimental":[41,160],"conditions,":[42],"(ii)":[43],"paired":[44],"both":[48],"mRNAs":[49],"miRNAs,":[51],"(iii)":[52],"miRNA-perturbation":[57],"(e.g.":[58],"knockout":[60,126],"overexpression),":[62],"(iv)":[63],"known/predicted":[64],"targets":[66],"(v)":[68],"miRNA-disease":[69,110],"associations.":[70],"In":[71],"total,":[72],">8000":[73],"profiles,":[76],"\u223c300":[77],"miRNA-perturbed":[78],"\u223c2000":[83],"mRNA":[84],"are":[87,166],"compiled":[88],"with":[89,140],"manually":[90],"curated":[91],"annotations":[92],"on":[93],"disease,":[94],"tissue":[95],"type":[96],"perturbation.":[98],"By":[99],"integrating":[100],"these":[101],"data":[102],"sets,":[103],"a":[104,180],"series":[105],"novel":[107],"associations":[108,165],"(miRNA-miRNA,":[109],"miRNA-target)":[112],"extracted":[114],"via":[115],"shared":[116],"features.":[117],"For":[118],"example,":[119],"differentially":[120,134],"expressed":[121,135],"genes":[122],"(DEGs)":[123],"after":[124],"were":[127,138],"systematically":[128],"compared":[129,139],"against":[130],"targets.":[132],"Likewise,":[133],"miRNAs":[136],"(DEmiRs)":[137],"disease-associated":[141],"Additionally,":[143],"disease-phenotype":[147],"revealed":[149],"pairs":[151],"whose":[152],"was":[154],"regulated":[155],"in":[156,158],"parallel":[157],"conditions.":[163],"Complex":[164],"readily":[167],"accessible":[168],"using":[169],"interactive":[171],"network":[172],"visualization":[173],"interface.":[174],"serves":[178],"as":[179],"reference":[181],"investigate":[184],"function":[188],"(http://miRGator.kobic.re.kr).":[189]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2023,"cited_by_count":2},{"year":2022,"cited_by_count":3},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":17}],"updated_date":"2026-01-13T01:12:25.745995","created_date":"2025-10-10T00:00:00"}
