{"id":"https://openalex.org/W2074194840","doi":"https://doi.org/10.1093/nar/gkq1075","title":"IGRhCellID: integrated genomic resources of human cell lines for identification","display_name":"IGRhCellID: integrated genomic resources of human cell lines for identification","publication_year":2010,"publication_date":"2010-11-04","ids":{"openalex":"https://openalex.org/W2074194840","doi":"https://doi.org/10.1093/nar/gkq1075","mag":"2074194840","pmid":"https://pubmed.ncbi.nlm.nih.gov/21051335"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1075","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D520/18785570/gkq1075.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D520/18785570/gkq1075.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5087667707","display_name":"Cheng-Kai Shiau","orcid":"https://orcid.org/0000-0003-0883-8660"},"institutions":[{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Cheng-Kai Shiau","raw_affiliation_strings":["Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Sciences, Academia Sinica, Taipei 115, Taiwan","institution_ids":["https://openalex.org/I4210096666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109127618","display_name":"De-Leung Gu","orcid":"https://orcid.org/0009-0004-7561-5322"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"De-Leung Gu","raw_affiliation_strings":["School of Life Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"School of Life Sciences","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5022522972","display_name":"Chian\u2010Feng Chen","orcid":"https://orcid.org/0000-0002-4906-7949"},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]},{"id":"https://openalex.org/I4210087697","display_name":"National Yang Ming University Hospital","ror":"https://ror.org/003xdw211","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210087697"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chian-Feng Chen","raw_affiliation_strings":["National Yang Ming University"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Yang Ming University","institution_ids":["https://openalex.org/I4210087697","https://openalex.org/I148366613"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113647713","display_name":"Chi-Hung Lin","orcid":null},"institutions":[{"id":"https://openalex.org/I148366613","display_name":"National Yang Ming Chiao Tung University","ror":"https://ror.org/00se2k293","country_code":"TW","type":"education","lineage":["https://openalex.org/I148366613"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Chi-Hung Lin","raw_affiliation_strings":["National Yang Ming Chiao Tung University, Hsinchu, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"National Yang Ming Chiao Tung University, Hsinchu, Taiwan","institution_ids":["https://openalex.org/I148366613"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043700334","display_name":"Yuh\u2010Shan Jou","orcid":"https://orcid.org/0000-0001-5090-3732"},"institutions":[{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Yuh-Shan Jou","raw_affiliation_strings":["Academia Sinica - Institute of Biomedical Sciences"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Academia Sinica - Institute of Biomedical Sciences","institution_ids":["https://openalex.org/I4210096666"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.3841,"has_fulltext":false,"cited_by_count":13,"citation_normalized_percentile":{"value":0.7813039,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"39","issue":"suppl_1","first_page":"D520","last_page":"D524"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T12859","display_name":"Cell Image Analysis Techniques","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1304","display_name":"Biophysics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11970","display_name":"Molecular Biology Techniques and Applications","score":0.9922000169754028,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8873569965362549},{"id":"https://openalex.org/keywords/cdkn2b","display_name":"CDKN2B","score":0.7822847366333008},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.680660605430603},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6209960579872131},{"id":"https://openalex.org/keywords/cdkn2a","display_name":"CDKN2A","score":0.5633341073989868},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5235599875450134},{"id":"https://openalex.org/keywords/cell-culture","display_name":"Cell culture","score":0.47495460510253906},{"id":"https://openalex.org/keywords/genomics","display_name":"Genomics","score":0.43770474195480347},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.4368470311164856},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.43299782276153564},{"id":"https://openalex.org/keywords/identification","display_name":"Identification (biology)","score":0.4249740242958069},{"id":"https://openalex.org/keywords/karyotype","display_name":"Karyotype","score":0.42004889249801636},{"id":"https://openalex.org/keywords/cell","display_name":"Cell","score":0.4163798987865448},{"id":"https://openalex.org/keywords/chromosome","display_name":"Chromosome","score":0.4122133255004883}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8873569965362549},{"id":"https://openalex.org/C2776300330","wikidata":"https://www.wikidata.org/wiki/Q17860505","display_name":"CDKN2B","level":4,"score":0.7822847366333008},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.680660605430603},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6209960579872131},{"id":"https://openalex.org/C2780265364","wikidata":"https://www.wikidata.org/wiki/Q5009957","display_name":"CDKN2A","level":3,"score":0.5633341073989868},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5235599875450134},{"id":"https://openalex.org/C81885089","wikidata":"https://www.wikidata.org/wiki/Q189082","display_name":"Cell culture","level":2,"score":0.47495460510253906},{"id":"https://openalex.org/C189206191","wikidata":"https://www.wikidata.org/wiki/Q222046","display_name":"Genomics","level":4,"score":0.43770474195480347},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.4368470311164856},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.43299782276153564},{"id":"https://openalex.org/C116834253","wikidata":"https://www.wikidata.org/wiki/Q2039217","display_name":"Identification (biology)","level":2,"score":0.4249740242958069},{"id":"https://openalex.org/C53226629","wikidata":"https://www.wikidata.org/wiki/Q189967","display_name":"Karyotype","level":4,"score":0.42004889249801636},{"id":"https://openalex.org/C1491633281","wikidata":"https://www.wikidata.org/wiki/Q7868","display_name":"Cell","level":2,"score":0.4163798987865448},{"id":"https://openalex.org/C30481170","wikidata":"https://www.wikidata.org/wiki/Q37748","display_name":"Chromosome","level":3,"score":0.4122133255004883},{"id":"https://openalex.org/C59822182","wikidata":"https://www.wikidata.org/wiki/Q441","display_name":"Botany","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002460","descriptor_name":"Cell Line","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D045744","descriptor_name":"Cell Line, Tumor","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D056426","descriptor_name":"Genetic Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkq1075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1075","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D520/18785570/gkq1075.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21051335","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21051335","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.292.1734","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.292.1734","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/6d/ac/Nucleic_Acids_Res_2011_Jan_4_39(Database_issue)_D520-D524.tar.gz","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:3013678","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013678","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1075","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1075","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D520/18785570/gkq1075.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2074194840.pdf"},"referenced_works_count":38,"referenced_works":["https://openalex.org/W161369723","https://openalex.org/W166755727","https://openalex.org/W260158747","https://openalex.org/W1899791338","https://openalex.org/W1909009735","https://openalex.org/W1951189073","https://openalex.org/W1964643678","https://openalex.org/W1983286534","https://openalex.org/W1986694287","https://openalex.org/W1997707998","https://openalex.org/W2000248995","https://openalex.org/W2016190772","https://openalex.org/W2020541351","https://openalex.org/W2036803996","https://openalex.org/W2038437697","https://openalex.org/W2043127647","https://openalex.org/W2047151046","https://openalex.org/W2088453120","https://openalex.org/W2092741708","https://openalex.org/W2094205631","https://openalex.org/W2097005928","https://openalex.org/W2098740402","https://openalex.org/W2112846847","https://openalex.org/W2113001012","https://openalex.org/W2131445279","https://openalex.org/W2133891200","https://openalex.org/W2135405268","https://openalex.org/W2139447006","https://openalex.org/W2168018632","https://openalex.org/W4251426292","https://openalex.org/W4252563654","https://openalex.org/W4285719527","https://openalex.org/W4361804794","https://openalex.org/W6606691217","https://openalex.org/W6639542411","https://openalex.org/W6640823485","https://openalex.org/W6679821820","https://openalex.org/W6679879719"],"related_works":["https://openalex.org/W1970446973","https://openalex.org/W2003758702","https://openalex.org/W2031436818","https://openalex.org/W2089798460","https://openalex.org/W2187207551","https://openalex.org/W2069184423","https://openalex.org/W2903984190","https://openalex.org/W2549117626","https://openalex.org/W1603543036","https://openalex.org/W2032217030"],"abstract_inverted_index":{"Cell":[0],"line":[1,12],"identification":[2,35,163],"is":[3,29],"emerging":[4],"as":[5,101,107,125,142],"an":[6],"essential":[7],"method":[8,61],"for":[9,23,92,120,136,161,181],"every":[10],"cell":[11,21,34,68,81,94,104,118,162,179],"user":[13],"in":[14,55,78,109,127,152],"research":[15],"community":[16],"to":[17,31,90,99,115,164],"avoid":[18],"using":[19,169],"misidentified":[20,170],"lines":[22,95,180],"experiments":[24],"and":[25,49,59,130,150],"publications.":[26],"IGRhCellID":[27,155],"(http://igrcid.ibms.sinica.edu.tw)":[28],"designed":[30],"integrate":[32],"eight":[33],"methods":[36,39,160],"including":[37],"seven":[38],"(STR":[40],"profile,":[41,46],"gender,":[42],"immunotypes,":[43],"karyotype,":[44],"isoenzyme":[45],"TP53":[47],"mutation":[48],"mutations":[50],"of":[51,62,66,73,84,168,177],"cancer":[52,80,139],"genes)":[53],"available":[54,159],"various":[56],"public":[57],"databases":[58],"our":[60],"profiling":[63],"genome":[64],"alterations":[65,86],"human":[67,79,93,178],"lines.":[69],"With":[70],"data":[71],"validation":[72],"11":[74],"small":[75],"deleted":[76,97],"genes":[77,140],"lines,":[82],"profiles":[83],"genomic":[85],"further":[87],"allow":[88],"users":[89],"search":[91],"with":[96,112,131,146],"gene":[98,110,114,128],"serve":[100],"indigenous":[102],"knock-out":[103],"model":[105],"(such":[106,124,141],"SMAD4":[108],"view),":[111],"amplified":[113],"be":[116],"the":[117],"models":[119],"testing":[121],"therapeutic":[122],"efficacy":[123],"ERBB2":[126],"view)":[129],"overlapped":[132],"aberrant":[133],"chromosomal":[134],"loci":[135],"revealing":[137],"common":[138],"9p21.3":[143],"homozygous":[144],"deletion":[145],"co-deleted":[147],"CDKN2A,":[148],"CDKN2B":[149],"MTAP":[151],"chromosome":[153],"view).":[154],"provides":[156],"not":[157],"only":[158],"help":[165],"eradicating":[166],"concerns":[167],"cells":[171],"but":[172],"also":[173],"designated":[174],"genetic":[175],"features":[176],"experiments.":[182]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":2},{"year":2014,"cited_by_count":1}],"updated_date":"2026-06-11T09:08:48.828518","created_date":"2025-10-10T00:00:00"}