{"id":"https://openalex.org/W1995224771","doi":"https://doi.org/10.1093/nar/gkq1069","title":"RBPDB: a database of RNA-binding specificities","display_name":"RBPDB: a database of RNA-binding specificities","publication_year":2010,"publication_date":"2010-10-29","ids":{"openalex":"https://openalex.org/W1995224771","doi":"https://doi.org/10.1093/nar/gkq1069","mag":"1995224771","pmid":"https://pubmed.ncbi.nlm.nih.gov/21036867"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1069","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D301/7627026/gkq1069.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D301/7627026/gkq1069.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5012444542","display_name":"Kate B. Cook","orcid":"https://orcid.org/0000-0002-0174-1113"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"K. B. Cook","raw_affiliation_strings":["Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, University of Toronto, Toronto, Ontario M5S 3E1, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074332682","display_name":"Hilal Kazan","orcid":"https://orcid.org/0000-0003-2461-4579"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"H. Kazan","raw_affiliation_strings":["Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084666204","display_name":"Khalid Zuberi","orcid":null},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"K. Zuberi","raw_affiliation_strings":["Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035010657","display_name":"Quaid Morris","orcid":"https://orcid.org/0000-0002-2760-6999"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"Q. Morris","raw_affiliation_strings":["Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada","institution_ids":["https://openalex.org/I185261750"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5090087019","display_name":"Timothy Hughes","orcid":"https://orcid.org/0000-0002-8022-6012"},"institutions":[{"id":"https://openalex.org/I185261750","display_name":"University of Toronto","ror":"https://ror.org/03dbr7087","country_code":"CA","type":"education","lineage":["https://openalex.org/I185261750"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"T. R. Hughes","raw_affiliation_strings":["Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Molecular Genetics, 2 Department of Computer Science, 3 The Terrence Donnelly Centre for Cellular and Biomolecular Research and 4 Banting and Best Department of Medical Research, University of Toronto, Toronto, Ontario M5S 3E1, Canada","institution_ids":["https://openalex.org/I185261750"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5090087019"],"corresponding_institution_ids":["https://openalex.org/I185261750"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.5358,"has_fulltext":false,"cited_by_count":702,"citation_normalized_percentile":{"value":0.97483619,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"39","issue":"Database","first_page":"D301","last_page":"D308"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9991999864578247,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.799373984336853},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.6855155825614929},{"id":"https://openalex.org/keywords/rna-binding-protein","display_name":"RNA-binding protein","score":0.6179531216621399},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.5691072344779968},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.47935348749160767},{"id":"https://openalex.org/keywords/immunoprecipitation","display_name":"Immunoprecipitation","score":0.4454437792301178},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.42041367292404175},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.26296454668045044},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19641301035881042},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.1502927839756012}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.799373984336853},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.6855155825614929},{"id":"https://openalex.org/C41282012","wikidata":"https://www.wikidata.org/wiki/Q3928341","display_name":"RNA-binding protein","level":4,"score":0.6179531216621399},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.5691072344779968},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.47935348749160767},{"id":"https://openalex.org/C71829478","wikidata":"https://www.wikidata.org/wiki/Q901305","display_name":"Immunoprecipitation","level":3,"score":0.4454437792301178},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.42041367292404175},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.26296454668045044},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19641301035881042},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.1502927839756012}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029721","descriptor_name":"Drosophila Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D029742","descriptor_name":"Caenorhabditis elegans Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkq1069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1069","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D301/7627026/gkq1069.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21036867","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21036867","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013675","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013675","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1069","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1069","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D301/7627026/gkq1069.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1268403286","display_name":null,"funder_award_id":"1R01HG00570","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"},{"id":"https://openalex.org/G5236848875","display_name":null,"funder_award_id":"MOP-93671","funder_id":"https://openalex.org/F4320334506","funder_display_name":"Canadian Institutes of Health Research"},{"id":"https://openalex.org/G6329368067","display_name":null,"funder_award_id":"MOP-49451","funder_id":"https://openalex.org/F4320334506","funder_display_name":"Canadian Institutes of Health Research"},{"id":"https://openalex.org/G7487022058","display_name":null,"funder_award_id":"R01 HG005700","funder_id":"https://openalex.org/F4320337348","funder_display_name":"National Human Genome Research Institute"}],"funders":[{"id":"https://openalex.org/F4320334506","display_name":"Canadian Institutes of Health Research","ror":"https://ror.org/01gavpb45"},{"id":"https://openalex.org/F4320337348","display_name":"National Human Genome Research Institute","ror":"https://ror.org/00baak391"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":45,"referenced_works":["https://openalex.org/W1605091261","https://openalex.org/W1966194317","https://openalex.org/W1978883675","https://openalex.org/W2001320847","https://openalex.org/W2001952613","https://openalex.org/W2002061677","https://openalex.org/W2006270175","https://openalex.org/W2007905902","https://openalex.org/W2014739284","https://openalex.org/W2016275728","https://openalex.org/W2020433571","https://openalex.org/W2044117548","https://openalex.org/W2047253404","https://openalex.org/W2050002679","https://openalex.org/W2053003053","https://openalex.org/W2080071375","https://openalex.org/W2083734066","https://openalex.org/W2084975981","https://openalex.org/W2086948271","https://openalex.org/W2087672655","https://openalex.org/W2087744052","https://openalex.org/W2089029993","https://openalex.org/W2097572021","https://openalex.org/W2109745159","https://openalex.org/W2112466127","https://openalex.org/W2113891856","https://openalex.org/W2125323012","https://openalex.org/W2130479394","https://openalex.org/W2135030836","https://openalex.org/W2136495792","https://openalex.org/W2141885858","https://openalex.org/W2142045367","https://openalex.org/W2142570576","https://openalex.org/W2146940435","https://openalex.org/W2149480306","https://openalex.org/W2150934173","https://openalex.org/W2152432732","https://openalex.org/W2154241726","https://openalex.org/W2154362705","https://openalex.org/W2158266834","https://openalex.org/W2163965551","https://openalex.org/W2168909179","https://openalex.org/W2169365434","https://openalex.org/W2170186108","https://openalex.org/W4210623056"],"related_works":["https://openalex.org/W1976739589","https://openalex.org/W7949606","https://openalex.org/W121381176","https://openalex.org/W2023181098","https://openalex.org/W2526890363","https://openalex.org/W626095004","https://openalex.org/W4298710875","https://openalex.org/W3026990883","https://openalex.org/W2569356794","https://openalex.org/W3042819199"],"abstract_inverted_index":{"The":[0,86],"RNA-Binding":[1],"Protein":[2],"DataBase":[3],"(RBPDB)":[4],"is":[5,88,123],"a":[6,30,91],"collection":[7],"of":[8,11,77,79,105],"experimental":[9,34],"observations":[10],"RNA-binding":[12,39,44],"sites,":[13],"both":[14],"in":[15,18,46,69,80],"vitro":[16],"and":[17,53,74,103,107],"vivo,":[19],"manually":[20],"curated":[21],"from":[22,83],"primary":[23],"literature.":[24],"To":[25],"build":[26],"RBPDB,":[27],"we":[28],"performed":[29],"literature":[31],"search":[32],"for":[33,37,119],"binding":[35,59],"data":[36,60,109],"all":[38],"proteins":[40],"(RBPs)":[41],"with":[42],"known":[43],"domains":[45],"four":[47],"metazoan":[48],"species":[49],"(human,":[50],"mouse,":[51],"fly":[52],"worm).":[54],"In":[55],"total,":[56],"RPBDB":[57],"contains":[58],"on":[61],"272":[62],"RBPs,":[63],"including":[64],"71":[65],"that":[66],"have":[67],"motifs":[68],"position":[70],"weight":[71],"matrix":[72],"format,":[73],"36":[75],"sets":[76],"sequences":[78,118],"vivo-bound":[81],"transcripts":[82],"immunoprecipitation":[84],"experiments.":[85],"database":[87],"accessible":[89],"by":[90,97,100],"web":[92],"interface":[93],"which":[94],"allows":[95],"browsing":[96],"domain":[98],"or":[99],"organism,":[101],"searching":[102],"export":[104],"records,":[106],"bulk":[108],"downloads.":[110],"Users":[111],"can":[112],"also":[113],"use":[114],"RBPDB":[115,122],"to":[116],"scan":[117],"RBP-binding":[120],"sites.":[121],"freely":[124],"available,":[125],"without":[126],"registration":[127],"at":[128],"http://rbpdb.ccbr.utoronto.ca/.":[129]},"counts_by_year":[{"year":2026,"cited_by_count":27},{"year":2025,"cited_by_count":67},{"year":2024,"cited_by_count":77},{"year":2023,"cited_by_count":40},{"year":2022,"cited_by_count":49},{"year":2021,"cited_by_count":57},{"year":2020,"cited_by_count":109},{"year":2019,"cited_by_count":38},{"year":2018,"cited_by_count":40},{"year":2017,"cited_by_count":36},{"year":2016,"cited_by_count":38},{"year":2015,"cited_by_count":43},{"year":2014,"cited_by_count":33},{"year":2013,"cited_by_count":25},{"year":2012,"cited_by_count":17}],"updated_date":"2026-06-25T06:16:34.145877","created_date":"2016-06-24T00:00:00"}
