{"id":"https://openalex.org/W2153234291","doi":"https://doi.org/10.1093/nar/gkq1056","title":"starBase: a database for exploring microRNA\u2013mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data","display_name":"starBase: a database for exploring microRNA\u2013mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data","publication_year":2010,"publication_date":"2010-10-30","ids":{"openalex":"https://openalex.org/W2153234291","doi":"https://doi.org/10.1093/nar/gkq1056","mag":"2153234291","pmid":"https://pubmed.ncbi.nlm.nih.gov/21037263"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkq1056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1056","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D202/18785142/gkq1056.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D202/18785142/gkq1056.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5029157661","display_name":"Jianhua Yang","orcid":"https://orcid.org/0000-0003-3863-2786"},"institutions":[{"id":"https://openalex.org/I157773358","display_name":"Sun Yat-sen University","ror":"https://ror.org/0064kty71","country_code":"CN","type":"education","lineage":["https://openalex.org/I157773358"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jian-Hua Yang","raw_affiliation_strings":["Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou 510275, PR China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Key Laboratory of Gene Engineering of the Ministry of Education, State Key Laboratory for Biocontrol, Sun Yat-sen University, Guangzhou 510275, PR China","institution_ids":["https://openalex.org/I157773358"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101576584","display_name":"Junhao Li","orcid":"https://orcid.org/0000-0001-6784-3780"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jun-Hao Li","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5015571143","display_name":"Peng Shao","orcid":"https://orcid.org/0000-0002-8453-6480"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Peng Shao","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5035204640","display_name":"Hui Zhou","orcid":"https://orcid.org/0000-0001-9157-3792"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Hui Zhou","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100459043","display_name":"Yujie Chen","orcid":"https://orcid.org/0000-0002-9905-9138"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Yue-Qin Chen","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]},{"author_position":"last","author":{"id":"https://openalex.org/A5012836038","display_name":"Liang\u2010Hu Qu","orcid":"https://orcid.org/0000-0003-3657-2863"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Liang-Hu Qu","raw_affiliation_strings":[],"raw_orcid":null,"affiliations":[]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":[],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":14.7515,"has_fulltext":false,"cited_by_count":836,"citation_normalized_percentile":{"value":0.99281403,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"39","issue":"suppl_1","first_page":"D202","last_page":"D209"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9997000098228455,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8619903326034546},{"id":"https://openalex.org/keywords/argonaute","display_name":"Argonaute","score":0.8022948503494263},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.6164849400520325},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4920760989189148},{"id":"https://openalex.org/keywords/rna-seq","display_name":"RNA-Seq","score":0.4489261507987976},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4152846038341522},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.39039185643196106},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2855902314186096},{"id":"https://openalex.org/keywords/transcriptome","display_name":"Transcriptome","score":0.2352372109889984},{"id":"https://openalex.org/keywords/rna","display_name":"RNA","score":0.21842047572135925},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.21279075741767883},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.19350701570510864},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.18607094883918762},{"id":"https://openalex.org/keywords/rna-interference","display_name":"RNA interference","score":0.10060873627662659}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8619903326034546},{"id":"https://openalex.org/C201853390","wikidata":"https://www.wikidata.org/wiki/Q413236","display_name":"Argonaute","level":5,"score":0.8022948503494263},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.6164849400520325},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4920760989189148},{"id":"https://openalex.org/C107397762","wikidata":"https://www.wikidata.org/wiki/Q2542347","display_name":"RNA-Seq","level":5,"score":0.4489261507987976},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4152846038341522},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.39039185643196106},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2855902314186096},{"id":"https://openalex.org/C162317418","wikidata":"https://www.wikidata.org/wiki/Q252857","display_name":"Transcriptome","level":4,"score":0.2352372109889984},{"id":"https://openalex.org/C67705224","wikidata":"https://www.wikidata.org/wiki/Q11053","display_name":"RNA","level":3,"score":0.21842047572135925},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.21279075741767883},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.19350701570510864},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.18607094883918762},{"id":"https://openalex.org/C166703698","wikidata":"https://www.wikidata.org/wiki/Q201993","display_name":"RNA interference","level":4,"score":0.10060873627662659}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D016601","descriptor_name":"RNA-Binding Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017423","descriptor_name":"Sequence Analysis, RNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkq1056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1056","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D202/18785142/gkq1056.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:21037263","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/21037263","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:3013664","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/3013664","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkq1056","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkq1056","pdf_url":"https://academic.oup.com/nar/article-pdf/39/suppl_1/D202/18785142/gkq1056.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2153234291.pdf"},"referenced_works_count":58,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W177743506","https://openalex.org/W1974898488","https://openalex.org/W1975437957","https://openalex.org/W1982660543","https://openalex.org/W1988163167","https://openalex.org/W1990937720","https://openalex.org/W1992873592","https://openalex.org/W1994145712","https://openalex.org/W1994547959","https://openalex.org/W2006079840","https://openalex.org/W2009326616","https://openalex.org/W2014946489","https://openalex.org/W2019462717","https://openalex.org/W2036649644","https://openalex.org/W2040191060","https://openalex.org/W2044117548","https://openalex.org/W2046314136","https://openalex.org/W2050002679","https://openalex.org/W2050869737","https://openalex.org/W2053003053","https://openalex.org/W2053490054","https://openalex.org/W2067920743","https://openalex.org/W2070571588","https://openalex.org/W2072285646","https://openalex.org/W2083381199","https://openalex.org/W2090219560","https://openalex.org/W2100317431","https://openalex.org/W2103017472","https://openalex.org/W2104806799","https://openalex.org/W2110107366","https://openalex.org/W2114886369","https://openalex.org/W2124985265","https://openalex.org/W2127640118","https://openalex.org/W2134118500","https://openalex.org/W2137523780","https://openalex.org/W2139582953","https://openalex.org/W2140040154","https://openalex.org/W2149785901","https://openalex.org/W2151804955","https://openalex.org/W2152267176","https://openalex.org/W2154793065","https://openalex.org/W2155649150","https://openalex.org/W2157039533","https://openalex.org/W2157953344","https://openalex.org/W2159209696","https://openalex.org/W2159482845","https://openalex.org/W2159793493","https://openalex.org/W2160913143","https://openalex.org/W2162674813","https://openalex.org/W2162727919","https://openalex.org/W2163199119","https://openalex.org/W2168546553","https://openalex.org/W2413823822","https://openalex.org/W2918025614","https://openalex.org/W4294216483","https://openalex.org/W6676431930","https://openalex.org/W6715831638"],"related_works":["https://openalex.org/W2033469771","https://openalex.org/W11382354","https://openalex.org/W2113666425","https://openalex.org/W2740520347","https://openalex.org/W2325004843","https://openalex.org/W1964833020","https://openalex.org/W2797536688","https://openalex.org/W2055453791","https://openalex.org/W3149866437","https://openalex.org/W2401899855"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"represent":[2],"an":[3],"important":[4],"class":[5],"of":[6,45,74,104,128,132,146,187],"small":[7],"non-coding":[8],"RNAs":[9],"(sRNAs)":[10],"that":[11],"regulate":[12],"gene":[13,190],"expression":[14],"by":[15,136],"targeting":[16],"messenger":[17],"RNAs.":[18],"However,":[19],"assigning":[20],"miRNAs":[21],"to":[22,41,69,167],"their":[23],"regulatory":[24,153],"target":[25,63,120,133,139,171],"genes":[26],"remains":[27],"technically":[28],"challenging.":[29],"Recently,":[30],"high-throughput":[31,87],"CLIP-Seq":[32,79,93,106,156,174],"and":[33,48,80,94,107,116,124,131,149,157,175,185,192],"degradome":[34],"sequencing":[35,88],"(Degradome-Seq)":[36],"methods":[37],"have":[38,67],"been":[39],"applied":[40],"identify":[42],"the":[43,71],"sites":[44,134,172],"Argonaute":[46],"interaction":[47,76],"miRNA":[49,138,170],"cleavage":[50],"sites,":[51],"respectively.":[52,126,160],"In":[53],"this":[54],"study,":[55],"we":[56,66,110],"introduce":[57],"a":[58],"novel":[59,169],"database,":[60],"starBase":[61,195],"(sRNA":[62],"Base),":[64],"which":[65],"developed":[68],"facilitate":[70],"comprehensive":[72],"exploration":[73,186],"miRNA-target":[75,152],"maps":[77],"from":[78,91,98,155,173],"Degradome-Seq":[81,96,108,158,176],"data.":[82,177],"The":[83,194],"current":[84],"version":[85],"includes":[86],"data":[89],"generated":[90],"21":[92],"10":[95],"experiments":[97],"six":[99],"organisms.":[100],"By":[101],"analyzing":[102],"millions":[103],"mapped":[105],"reads,":[109],"identified":[111],"\u223c1":[112],"million":[113,118],"Ago-binding":[114],"clusters":[115,121],"\u223c2":[117],"cleaved":[119],"in":[122,143],"animals":[123],"plants,":[125],"Analyses":[127],"these":[129],"clusters,":[130],"predicted":[135],"6":[137],"prediction":[140],"programs,":[141],"resulted":[142],"our":[144],"identification":[145],"approximately":[147,150],"400,000":[148],"66,000":[151],"relationships":[154],"data,":[159],"Furthermore,":[161],"two":[162],"web":[163,179],"servers":[164],"were":[165],"provided":[166],"discover":[168],"Our":[178],"implementation":[180],"supports":[181],"diverse":[182],"query":[183],"types":[184],"common":[188],"targets,":[189],"ontologies":[191],"pathways.":[193],"is":[196],"available":[197],"at":[198],"http://starbase.sysu.edu.cn/.":[199]},"counts_by_year":[{"year":2026,"cited_by_count":13},{"year":2025,"cited_by_count":28},{"year":2024,"cited_by_count":41},{"year":2023,"cited_by_count":38},{"year":2022,"cited_by_count":83},{"year":2021,"cited_by_count":61},{"year":2020,"cited_by_count":81},{"year":2019,"cited_by_count":79},{"year":2018,"cited_by_count":52},{"year":2017,"cited_by_count":57},{"year":2016,"cited_by_count":50},{"year":2015,"cited_by_count":63},{"year":2014,"cited_by_count":66},{"year":2013,"cited_by_count":58},{"year":2012,"cited_by_count":46}],"updated_date":"2026-06-17T06:14:20.161405","created_date":"2025-10-10T00:00:00"}
