{"id":"https://openalex.org/W2047149866","doi":"https://doi.org/10.1093/nar/gkp968","title":"HHMD: the human histone modification database","display_name":"HHMD: the human histone modification database","publication_year":2009,"publication_date":"2009-11-05","ids":{"openalex":"https://openalex.org/W2047149866","doi":"https://doi.org/10.1093/nar/gkp968","mag":"2047149866","pmid":"https://pubmed.ncbi.nlm.nih.gov/19892823"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp968","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp968","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://doi.org/10.1093/nar/gkp968","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100456264","display_name":"Yan Zhang","orcid":"https://orcid.org/0000-0002-5307-2484"},"institutions":[{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Yan Zhang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China#TAB#"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China","institution_ids":["https://openalex.org/I156144747"]},{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin 150081, China#TAB#","institution_ids":["https://openalex.org/I156144747"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113683918","display_name":"Jie Lv","orcid":"https://orcid.org/0000-0003-2329-4817"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jie Lv","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5107393154","display_name":"Hongbo Liu","orcid":"https://orcid.org/0000-0002-2320-3682"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Hongbo Liu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058166806","display_name":"Jiang Zhu","orcid":"https://orcid.org/0000-0001-9764-8281"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jiang Zhu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5083159278","display_name":"Jianzhong Su","orcid":"https://orcid.org/0000-0002-1172-7411"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Jianzhong Su","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100638546","display_name":"Qiong Wu","orcid":"https://orcid.org/0000-0003-3305-6652"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Qiong Wu","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101398997","display_name":"Yunfeng Qi","orcid":"https://orcid.org/0000-0002-2704-6792"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Yunfeng Qi","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100762768","display_name":"Fang Wang","orcid":"https://orcid.org/0009-0001-8433-1346"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Fang Wang","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100445596","display_name":"Xia Li","orcid":"https://orcid.org/0000-0002-9794-2648"},"institutions":[{"id":"https://openalex.org/I100188998","display_name":"Harbin University of Science and Technology","ror":"https://ror.org/04e6y1282","country_code":"CN","type":"education","lineage":["https://openalex.org/I100188998"]},{"id":"https://openalex.org/I1308199089","display_name":"Harbin University","ror":"https://ror.org/00ey9xa07","country_code":"CN","type":"education","lineage":["https://openalex.org/I1308199089"]},{"id":"https://openalex.org/I156144747","display_name":"Harbin Medical University","ror":"https://ror.org/05jscf583","country_code":"CN","type":"education","lineage":["https://openalex.org/I156144747"]},{"id":"https://openalex.org/I204983213","display_name":"Harbin Institute of Technology","ror":"https://ror.org/01yqg2h08","country_code":"CN","type":"education","lineage":["https://openalex.org/I204983213"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Xia Li","raw_affiliation_strings":["College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2 Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"]},{"raw_affiliation_string":"1College of Bioinformatics Science and Technology, Harbin Medical University, Harbin, 150081 and 2Department of Life Science and Engineering, Harbin Institute of Technology, Harbin, 150001, China","institution_ids":["https://openalex.org/I156144747","https://openalex.org/I204983213"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100445596","https://openalex.org/A5100456264"],"corresponding_institution_ids":["https://openalex.org/I100188998","https://openalex.org/I1308199089","https://openalex.org/I156144747","https://openalex.org/I204983213"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.8957,"has_fulltext":false,"cited_by_count":93,"citation_normalized_percentile":{"value":0.91184594,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":96,"max":99},"biblio":{"volume":"38","issue":"suppl_1","first_page":"D149","last_page":"D154"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10269","display_name":"Epigenetics and DNA Methylation","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9986000061035156,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/histone","display_name":"Histone","score":0.8034709692001343},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7136483192443848},{"id":"https://openalex.org/keywords/histone-code","display_name":"Histone code","score":0.6626331806182861},{"id":"https://openalex.org/keywords/histone-methylation","display_name":"Histone methylation","score":0.595788836479187},{"id":"https://openalex.org/keywords/epigenomics","display_name":"Epigenomics","score":0.528963029384613},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4733569622039795},{"id":"https://openalex.org/keywords/acetylation","display_name":"Acetylation","score":0.44906938076019287},{"id":"https://openalex.org/keywords/chromatin","display_name":"Chromatin","score":0.4438548982143402},{"id":"https://openalex.org/keywords/histone-methyltransferase","display_name":"Histone methyltransferase","score":0.43421128392219543},{"id":"https://openalex.org/keywords/cancer-epigenetics","display_name":"Cancer epigenetics","score":0.42086851596832275},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4133550524711609},{"id":"https://openalex.org/keywords/dna-methylation","display_name":"DNA methylation","score":0.2924535870552063},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.17871412634849548},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.17754292488098145},{"id":"https://openalex.org/keywords/nucleosome","display_name":"Nucleosome","score":0.14901509881019592}],"concepts":[{"id":"https://openalex.org/C64927066","wikidata":"https://www.wikidata.org/wiki/Q36293","display_name":"Histone","level":3,"score":0.8034709692001343},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7136483192443848},{"id":"https://openalex.org/C10058791","wikidata":"https://www.wikidata.org/wiki/Q910897","display_name":"Histone code","level":5,"score":0.6626331806182861},{"id":"https://openalex.org/C22709980","wikidata":"https://www.wikidata.org/wiki/Q4117777","display_name":"Histone methylation","level":5,"score":0.595788836479187},{"id":"https://openalex.org/C121912465","wikidata":"https://www.wikidata.org/wiki/Q3589153","display_name":"Epigenomics","level":5,"score":0.528963029384613},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4733569622039795},{"id":"https://openalex.org/C119157956","wikidata":"https://www.wikidata.org/wiki/Q796604","display_name":"Acetylation","level":3,"score":0.44906938076019287},{"id":"https://openalex.org/C83640560","wikidata":"https://www.wikidata.org/wiki/Q180951","display_name":"Chromatin","level":3,"score":0.4438548982143402},{"id":"https://openalex.org/C150425827","wikidata":"https://www.wikidata.org/wiki/Q2560317","display_name":"Histone methyltransferase","level":4,"score":0.43421128392219543},{"id":"https://openalex.org/C114691636","wikidata":"https://www.wikidata.org/wiki/Q5031434","display_name":"Cancer epigenetics","level":5,"score":0.42086851596832275},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4133550524711609},{"id":"https://openalex.org/C190727270","wikidata":"https://www.wikidata.org/wiki/Q874745","display_name":"DNA methylation","level":4,"score":0.2924535870552063},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.17871412634849548},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.17754292488098145},{"id":"https://openalex.org/C84772758","wikidata":"https://www.wikidata.org/wiki/Q271794","display_name":"Nucleosome","level":4,"score":0.14901509881019592}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D002843","descriptor_name":"Chromatin","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006657","descriptor_name":"Histones","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019175","descriptor_name":"DNA Methylation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D047369","descriptor_name":"Chromatin Immunoprecipitation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkp968","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp968","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19892823","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19892823","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2808954","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2808954","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.331.6263","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.331.6263","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2009/11/05/nar.gkp968.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_1/D149","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_1/D149","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp968","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp968","pdf_url":null,"source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":42,"referenced_works":["https://openalex.org/W152662877","https://openalex.org/W1966941025","https://openalex.org/W1967364632","https://openalex.org/W1968931043","https://openalex.org/W1977621555","https://openalex.org/W1981194976","https://openalex.org/W1987189614","https://openalex.org/W1998051622","https://openalex.org/W2010768718","https://openalex.org/W2014286894","https://openalex.org/W2015416439","https://openalex.org/W2025183726","https://openalex.org/W2029197798","https://openalex.org/W2042249135","https://openalex.org/W2058325392","https://openalex.org/W2062821270","https://openalex.org/W2067563155","https://openalex.org/W2081091627","https://openalex.org/W2083245183","https://openalex.org/W2088536629","https://openalex.org/W2094172340","https://openalex.org/W2096939566","https://openalex.org/W2101214870","https://openalex.org/W2103495854","https://openalex.org/W2107580398","https://openalex.org/W2107903949","https://openalex.org/W2123060905","https://openalex.org/W2125458106","https://openalex.org/W2127440220","https://openalex.org/W2130239724","https://openalex.org/W2139031446","https://openalex.org/W2141410747","https://openalex.org/W2142257318","https://openalex.org/W2151821895","https://openalex.org/W2155884895","https://openalex.org/W2156443053","https://openalex.org/W2164975333","https://openalex.org/W2914577469","https://openalex.org/W2916408032","https://openalex.org/W4210430020","https://openalex.org/W4320800138","https://openalex.org/W4322384960"],"related_works":["https://openalex.org/W3082608639","https://openalex.org/W2782621646","https://openalex.org/W2059180978","https://openalex.org/W2070959297","https://openalex.org/W1972306915","https://openalex.org/W2367813745","https://openalex.org/W2008625770","https://openalex.org/W2108742077","https://openalex.org/W2058176071","https://openalex.org/W2038611688"],"abstract_inverted_index":{"Histone":[0,28,85],"modifications":[1,19,29,115],"play":[2],"important":[3],"roles":[4],"in":[5,17,116,127,183],"chromatin":[6],"remodeling,":[7],"gene":[8,136],"transcriptional":[9],"regulation,":[10],"stem":[11],"cell":[12],"maintenance":[13],"and":[14,33,39,46,94,142,167],"differentiation.":[15],"Alterations":[16],"histone":[18,49,71,82,97,114,134,157,170,180],"may":[20],"be":[21,53,131,161],"linked":[22],"to":[23,55],"human":[24,70,81,185],"diseases":[25],"especially":[26],"cancer.":[27],"including":[30],"methylation,":[31],"acetylation":[32],"ubiquitylation":[34],"probed":[35],"by":[36,133,154],"ChIP-seq,":[37],"ChIP-chip":[38],"qChIP":[40],"have":[41],"become":[42],"widely":[43],"available.":[44],"Mining":[45],"integration":[47,95],"of":[48,96,109,169,179],"modification":[50,98,158,181],"data":[51,64,120],"can":[52,130,160],"beneficial":[54],"novel":[56],"biological":[57],"discoveries.":[58],"There":[59],"has":[60,175],"been":[61],"no":[62],"comprehensive":[63,78],"repository":[65],"that":[66,100],"is":[67],"exclusive":[68],"for":[69,80],"modifications.":[72,83,171],"Therefore,":[73],"we":[74],"developed":[75],"a":[76,148],"relatively":[77],"database":[79,173],"Human":[84],"Modification":[86],"Database":[87],"(HHMD,":[88],"http://bioinfo.hrbmu.edu.cn/hhmd)":[89],"focuses":[90],"on":[91],"the":[92,165],"storage":[93],"datasets":[99],"were":[101],"obtained":[102],"from":[103],"laboratory":[104],"experiments.":[105],"The":[106,172],"latest":[107],"release":[108],"HHMD":[110,145],"incorporates":[111],"43":[112],"location-specific":[113],"human.":[117],"To":[118],"facilitate":[119],"extraction,":[121],"flexible":[122],"search":[123],"options":[124],"are":[125],"built":[126],"HHMD.":[128],"It":[129],"searched":[132],"modification,":[135],"ID,":[137],"functional":[138],"categories,":[139],"chromosome":[140],"location":[141],"cancer":[143],"name.":[144],"also":[146,174],"includes":[147],"user-friendly":[149],"visualization":[150,168],"tool":[151],"named":[152],"HisModView,":[153],"which":[155],"genome-wide":[156],"map":[159],"shown.":[162],"HisModView":[163],"facilitates":[164],"acquisition":[166],"manually":[176],"curated":[177],"information":[178],"dysregulation":[182],"nine":[184],"cancers.":[186]},"counts_by_year":[{"year":2026,"cited_by_count":2},{"year":2025,"cited_by_count":3},{"year":2024,"cited_by_count":3},{"year":2023,"cited_by_count":6},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":6},{"year":2020,"cited_by_count":6},{"year":2019,"cited_by_count":9},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":3},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":8}],"updated_date":"2026-08-18T07:49:30.821534","created_date":"2025-10-10T00:00:00"}
