{"id":"https://openalex.org/W2048270152","doi":"https://doi.org/10.1093/nar/gkp803","title":"TransmiR: a transcription factor\u2013microRNA regulation database","display_name":"TransmiR: a transcription factor\u2013microRNA regulation database","publication_year":2009,"publication_date":"2009-09-28","ids":{"openalex":"https://openalex.org/W2048270152","doi":"https://doi.org/10.1093/nar/gkp803","mag":"2048270152","pmid":"https://pubmed.ncbi.nlm.nih.gov/19786497"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp803","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp803","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_1/D119/11217661/gkp803.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/38/suppl_1/D119/11217661/gkp803.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100347435","display_name":"Juan Wang","orcid":"https://orcid.org/0000-0002-3111-9130"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Juan Wang","raw_affiliation_strings":["Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing 100191, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019314293","display_name":"Ming Lu","orcid":"https://orcid.org/0000-0003-1574-9850"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Ming Lu","raw_affiliation_strings":["Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007221570","display_name":"Chengxiang Qiu","orcid":"https://orcid.org/0000-0002-6346-8669"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Chengxiang Qiu","raw_affiliation_strings":["Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5027886490","display_name":"Qinghua Cui","orcid":"https://orcid.org/0000-0003-3018-5221"},"institutions":[{"id":"https://openalex.org/I20231570","display_name":"Peking University","ror":"https://ror.org/02v51f717","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Qinghua Cui","raw_affiliation_strings":["Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2 MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]},{"raw_affiliation_string":"1Department of Biomedical Informatics, Peking University School of Basic Medical Sciences and 2MOE Key Laboratory of Molecular Cardiology, Peking University, Beijing, 100191, China","institution_ids":["https://openalex.org/I20231570"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5027886490"],"corresponding_institution_ids":["https://openalex.org/I20231570"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.2854,"has_fulltext":true,"cited_by_count":411,"citation_normalized_percentile":{"value":0.96637807,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":95,"max":100},"biblio":{"volume":"38","issue":"suppl_1","first_page":"D119","last_page":"D122"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9975000023841858,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8451526761054993},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.8190498352050781},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.6513828039169312},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6164804697036743},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5857142806053162},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.5484689474105835},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5202804207801819},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.35056644678115845}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8451526761054993},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.8190498352050781},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.6513828039169312},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6164804697036743},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5857142806053162},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.5484689474105835},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5202804207801819},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.35056644678115845}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D016247","descriptor_name":"Information Storage and Retrieval","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D039781","descriptor_name":"PubMed","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D053263","descriptor_name":"Gene Regulatory Networks","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkp803","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp803","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_1/D119/11217661/gkp803.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19786497","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19786497","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:open-archive.highwire.org:nar:38/suppl_1/D119","is_oa":false,"landing_page_url":"http://nar.oxfordjournals.org/cgi/content/short/38/suppl_1/D119","pdf_url":null,"source":{"id":"https://openalex.org/S4406923041","display_name":"HighWire Press Open Archive","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"TEXT"},{"id":"pmh:oai:pubmedcentral.nih.gov:2808874","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2808874","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp803","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp803","pdf_url":"https://academic.oup.com/nar/article-pdf/38/suppl_1/D119/11217661/gkp803.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2048270152.pdf","grobid_xml":"https://content.openalex.org/works/W2048270152.grobid-xml"},"referenced_works_count":25,"referenced_works":["https://openalex.org/W144423133","https://openalex.org/W1648301895","https://openalex.org/W1750132576","https://openalex.org/W1983452147","https://openalex.org/W1986903527","https://openalex.org/W1989454102","https://openalex.org/W2009787326","https://openalex.org/W2014946489","https://openalex.org/W2027862889","https://openalex.org/W2044832480","https://openalex.org/W2047967134","https://openalex.org/W2060515857","https://openalex.org/W2067424615","https://openalex.org/W2077408537","https://openalex.org/W2090335107","https://openalex.org/W2092113020","https://openalex.org/W2092658747","https://openalex.org/W2120211068","https://openalex.org/W2135613885","https://openalex.org/W2136943892","https://openalex.org/W2145937040","https://openalex.org/W2169079604","https://openalex.org/W2171232191","https://openalex.org/W3103971085","https://openalex.org/W3145571634"],"related_works":["https://openalex.org/W2737319532","https://openalex.org/W3151405604","https://openalex.org/W2128583238","https://openalex.org/W2134405083","https://openalex.org/W2049907435","https://openalex.org/W2057742104","https://openalex.org/W2034377088","https://openalex.org/W4283692078","https://openalex.org/W2025542119","https://openalex.org/W2115260093"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"regulate":[2,84],"gene":[3,35],"expression":[4],"at":[5,39],"the":[6,21,40,79,102,150,157,161,166],"posttranscriptional":[7],"level":[8],"and":[9,52,67,86,104,133,142,168,177],"are":[10,170],"therefore":[11],"important":[12,32],"cellular":[13],"components.":[14],"As":[15],"is":[16,25,50],"true":[17],"for":[18,77,198],"protein-coding":[19],"genes,":[20],"transcription":[22,28],"of":[23,34,46,59],"miRNAs":[24,47,60,85,135,169],"regulated":[26],"by":[27,48,61,81,186,196],"factors":[29],"(TFs),":[30],"an":[31],"class":[33],"regulators":[36],"that":[37,56],"act":[38],"transcriptional":[41],"level.":[42],"The":[43],"correct":[44],"regulation":[45,58,72],"TFs":[49,62,83,132,141,167],"critical,":[51],"increasing":[53],"evidence":[54],"indicates":[55],"aberrant":[57],"can":[63,190],"cause":[64],"phenotypic":[65],"variations":[66],"diseases.":[68,91],"Therefore,":[69],"a":[70,123,183,200,203],"TF-miRNA":[71,107,124,193],"database":[73,126],"would":[74],"be":[75],"helpful":[76],"understanding":[78,87],"mechanisms":[80],"which":[82,110,129,160,187],"their":[88],"contribution":[89],"to":[90,121,149],"In":[92,144],"this":[93],"study,":[94],"we":[95,146],"manually":[96],"surveyed":[97],"approximately":[98],"5000":[99],"reports":[100],"in":[101,159],"literature":[103,152],"identified":[105],"243":[106,137],"regulatory":[108,125,138,194],"relationships,":[109],"were":[111],"supported":[112],"experimentally":[113],"from":[114],"86":[115],"publications.":[116],"We":[117],"used":[118],"these":[119],"data":[120],"build":[122],"(TransmiR,":[127],"http://cmbi.bjmu.edu.cn/transmir),":[128],"contains":[130],"82":[131],"100":[134],"with":[136,172],"pairs":[139,195],"between":[140],"miRNAs.":[143],"addition,":[145],"included":[147],"references":[148],"published":[151],"(PubMed":[153],"ID)":[154],"information":[155],"about":[156],"organism":[158],"relationship":[162],"was":[163],"found,":[164],"whether":[165],"involved":[171],"tumors,":[173],"miRNA":[174,201],"function":[175],"annotation":[176],"miRNA-associated":[178],"disease":[179],"annotation.":[180],"TransmiR":[181],"provides":[182],"user-friendly":[184],"interface":[185],"interested":[188],"parties":[189],"easily":[191],"retrieve":[192],"searching":[197],"either":[199],"or":[202],"TF.":[204]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":14},{"year":2024,"cited_by_count":14},{"year":2023,"cited_by_count":9},{"year":2022,"cited_by_count":16},{"year":2021,"cited_by_count":19},{"year":2020,"cited_by_count":27},{"year":2019,"cited_by_count":36},{"year":2018,"cited_by_count":33},{"year":2017,"cited_by_count":35},{"year":2016,"cited_by_count":45},{"year":2015,"cited_by_count":45},{"year":2014,"cited_by_count":25},{"year":2013,"cited_by_count":38},{"year":2012,"cited_by_count":29}],"updated_date":"2026-06-16T07:32:37.131356","created_date":"2025-10-10T00:00:00"}
