{"id":"https://openalex.org/W2092563396","doi":"https://doi.org/10.1093/nar/gkp531","title":"Evolution in bioinformatic resources: 2009 update on the Bioinformatics Links Directory","display_name":"Evolution in bioinformatic resources: 2009 update on the Bioinformatics Links Directory","publication_year":2009,"publication_date":"2009-06-15","ids":{"openalex":"https://openalex.org/W2092563396","doi":"https://doi.org/10.1093/nar/gkp531","mag":"2092563396","pmid":"https://pubmed.ncbi.nlm.nih.gov/19528072"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp531","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp531","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W3/3976185/gkp531.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W3/3976185/gkp531.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008170312","display_name":"Michelle D. Brazas","orcid":"https://orcid.org/0000-0001-8150-4531"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":true,"raw_author_name":"M. D. Brazas","raw_affiliation_strings":["Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3"],"affiliations":[{"raw_affiliation_string":"Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5046416576","display_name":"Joseph T. Yamada","orcid":null},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"J. T. Yamada","raw_affiliation_strings":["Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3"],"affiliations":[{"raw_affiliation_string":"Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3","institution_ids":["https://openalex.org/I112260969"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5026853900","display_name":"B. F. Francis Ouellette","orcid":"https://orcid.org/0000-0003-4676-675X"},"institutions":[{"id":"https://openalex.org/I112260969","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54","country_code":"CA","type":"funder","lineage":["https://openalex.org/I112260969"]}],"countries":["CA"],"is_corresponding":false,"raw_author_name":"B. F. F. Ouellette","raw_affiliation_strings":["Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3"],"affiliations":[{"raw_affiliation_string":"Ontario Institute for Cancer Research, 101 College Street, Suite 800, Toronto, Ontario, Canada M5G 0A3","institution_ids":["https://openalex.org/I112260969"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5008170312"],"corresponding_institution_ids":["https://openalex.org/I112260969"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.6959,"has_fulltext":true,"cited_by_count":37,"citation_normalized_percentile":{"value":0.90290406,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"37","issue":"Web Server","first_page":"W3","last_page":"W5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9983000159263611,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9966999888420105,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9944000244140625,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/directory","display_name":"Directory","score":0.9221904277801514},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.6981564164161682},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6225926876068115},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5218238234519958},{"id":"https://openalex.org/keywords/server","display_name":"Server","score":0.5087683796882629},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4815405011177063},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.4488884210586548},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.44759753346443176},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.42494603991508484},{"id":"https://openalex.org/keywords/organizational-unit","display_name":"Organizational unit","score":0.42436516284942627},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.3491148352622986},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.08207714557647705}],"concepts":[{"id":"https://openalex.org/C2777683733","wikidata":"https://www.wikidata.org/wiki/Q201456","display_name":"Directory","level":2,"score":0.9221904277801514},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.6981564164161682},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6225926876068115},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5218238234519958},{"id":"https://openalex.org/C93996380","wikidata":"https://www.wikidata.org/wiki/Q44127","display_name":"Server","level":2,"score":0.5087683796882629},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4815405011177063},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.4488884210586548},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.44759753346443176},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.42494603991508484},{"id":"https://openalex.org/C125001904","wikidata":"https://www.wikidata.org/wiki/Q2526961","display_name":"Organizational unit","level":2,"score":0.42436516284942627},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.3491148352622986},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.08207714557647705},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C38652104","wikidata":"https://www.wikidata.org/wiki/Q3510521","display_name":"Computer security","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D004181","descriptor_name":"Directories as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004181","descriptor_name":"Directories as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D004181","descriptor_name":"Directories as Topic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":"Q000266","qualifier_name":"history","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":"Q000266","qualifier_name":"history","is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":"Q000266","qualifier_name":"history","is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049674","descriptor_name":"History, 21st Century","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049674","descriptor_name":"History, 21st Century","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D049674","descriptor_name":"History, 21st Century","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkp531","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp531","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W3/3976185/gkp531.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19528072","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19528072","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2703910","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2703910","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp531","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp531","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W3/3976185/gkp531.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.5299999713897705,"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12"}],"awards":[{"id":"https://openalex.org/G8520920988","display_name":null,"funder_award_id":"Ontario","funder_id":"https://openalex.org/F4320314607","funder_display_name":"Government of Ontario"}],"funders":[{"id":"https://openalex.org/F4320313290","display_name":"Ontario Institute for Cancer Research","ror":"https://ror.org/043q8yx54"},{"id":"https://openalex.org/F4320314607","display_name":"Government of Ontario","ror":"https://ror.org/015pzp858"},{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2092563396.pdf","grobid_xml":"https://content.openalex.org/works/W2092563396.grobid-xml"},"referenced_works_count":10,"referenced_works":["https://openalex.org/W1928692152","https://openalex.org/W1989568035","https://openalex.org/W1996249120","https://openalex.org/W2002875415","https://openalex.org/W2026128067","https://openalex.org/W2100157378","https://openalex.org/W2112414993","https://openalex.org/W2113649367","https://openalex.org/W2122056961","https://openalex.org/W2161850605"],"related_works":["https://openalex.org/W3024420453","https://openalex.org/W181118223","https://openalex.org/W2626999804","https://openalex.org/W2016915417","https://openalex.org/W2217335235","https://openalex.org/W3027700384","https://openalex.org/W3115906952","https://openalex.org/W2114232805","https://openalex.org/W4235063742","https://openalex.org/W561640503"],"abstract_inverted_index":{"All":[0],"of":[1,14,73,84,101,123],"the":[2,37,50,67,77,81,88,124,130,141],"life":[3],"science":[4],"research":[5,31,58],"web":[6],"servers":[7,85],"published":[8],"in":[9,66,87,105],"this":[10,106],"and":[11,24,28,47,60,134],"previous":[12],"issues":[13],"Nucleic":[15,74,107,142],"Acids":[16,75,108,143],"Research,":[17,76],"together":[18],"with":[19],"other":[20],"useful":[21],"tools,":[22],"databases":[23],"resources":[25],"for":[26],"bioinformatics":[27],"molecular":[29],"biology":[30],"are":[32],"freely":[33],"accessible":[34],"online":[35,117,139],"through":[36],"Bioinformatics":[38,51,89,125],"Links":[39,52,90,126],"Directory,":[40,127],"http://bioinformatics.ca/links_directory/.":[41],"Entirely":[42],"dependent":[43],"on":[44],"user":[45],"feedback":[46],"community":[48],"input,":[49],"Directory":[53,91],"exemplifies":[54],"an":[55,94],"open":[56],"access":[57],"tool":[59],"resource.":[61],"With":[62],"112":[63],"websites":[64],"featured":[65],"July":[68],"2009":[69,78,110,121],"Web":[70,111,131],"Server":[71,112,132],"Issue":[72,113],"update":[79,122],"brings":[80],"total":[82],"number":[83],"listed":[86,104],"close":[92],"to":[93],"impressive":[95],"1400":[96],"links.":[97],"A":[98],"complete":[99],"list":[100,133],"all":[102],"links":[103],"Research":[109,144],"can":[114],"be":[115],"accessed":[116],"at":[118,140],"http://bioinfomatics.ca/links_directory/narweb2009/.":[119],"The":[120],"which":[128],"includes":[129],"summaries,":[135],"is":[136],"also":[137],"available":[138],"website,":[145],"http://nar.oxfordjournals.org/.":[146]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":6}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}