{"id":"https://openalex.org/W2026731344","doi":"https://doi.org/10.1093/nar/gkp464","title":"Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes","display_name":"Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes","publication_year":2009,"publication_date":"2009-05-31","ids":{"openalex":"https://openalex.org/W2026731344","doi":"https://doi.org/10.1093/nar/gkp464","mag":"2026731344","pmid":"https://pubmed.ncbi.nlm.nih.gov/19487240"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp464","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp464","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W247/16759230/gkp464.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W247/16759230/gkp464.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5046629951","display_name":"Federico Zambelli","orcid":"https://orcid.org/0000-0003-3487-4331"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]}],"countries":["IT"],"is_corresponding":true,"raw_author_name":"Federico Zambelli","raw_affiliation_strings":["Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5005312066","display_name":"Graziano Pesole","orcid":"https://orcid.org/0000-0003-3663-0859"},"institutions":[{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Graziano Pesole","raw_affiliation_strings":["Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, 2Dipartimento di Biochimica e Biologia Molecolare \u2018E. Quagliariello\u2019, University of Bari and 3Istituto Tecnologie Biomediche\u2014Consiglio Nazionale delle Ricerche, Bari, Italy","University of Milan, Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, 2Dipartimento di Biochimica e Biologia Molecolare \u2018E. Quagliariello\u2019, University of Bari and 3Istituto Tecnologie Biomediche\u2014Consiglio Nazionale delle Ricerche, Bari, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I5561750","https://openalex.org/I189158943"]},{"raw_affiliation_string":"University of Milan, Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5067492946","display_name":"Giulio Pavesi","orcid":"https://orcid.org/0000-0001-5705-6249"},"institutions":[{"id":"https://openalex.org/I5561750","display_name":"University of Bari Aldo Moro","ror":"https://ror.org/027ynra39","country_code":"IT","type":"education","lineage":["https://openalex.org/I5561750"]},{"id":"https://openalex.org/I189158943","display_name":"University of Milan","ror":"https://ror.org/00wjc7c48","country_code":"IT","type":"education","lineage":["https://openalex.org/I189158943"]},{"id":"https://openalex.org/I4210155236","display_name":"National Research Council","ror":"https://ror.org/04zaypm56","country_code":"IT","type":"funder","lineage":["https://openalex.org/I4210155236"]}],"countries":["IT"],"is_corresponding":false,"raw_author_name":"Giulio Pavesi","raw_affiliation_strings":["Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, 2Dipartimento di Biochimica e Biologia Molecolare \u2018E. Quagliariello\u2019, University of Bari and 3Istituto Tecnologie Biomediche\u2014Consiglio Nazionale delle Ricerche, Bari, Italy","University of Milan, Milan, Italy"],"affiliations":[{"raw_affiliation_string":"Dipartimento di Scienze Biomolecolari e Biotecnologie, University of Milan, Milan, 2Dipartimento di Biochimica e Biologia Molecolare \u2018E. Quagliariello\u2019, University of Bari and 3Istituto Tecnologie Biomediche\u2014Consiglio Nazionale delle Ricerche, Bari, Italy","institution_ids":["https://openalex.org/I4210155236","https://openalex.org/I5561750","https://openalex.org/I189158943"]},{"raw_affiliation_string":"University of Milan, Milan, Italy","institution_ids":["https://openalex.org/I189158943"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5046629951"],"corresponding_institution_ids":["https://openalex.org/I189158943"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.5882,"has_fulltext":true,"cited_by_count":416,"citation_normalized_percentile":{"value":0.98453639,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"37","issue":"suppl_2","first_page":"W247","last_page":"W252"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10222","display_name":"Genomics and Chromatin Dynamics","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9958999752998352,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9957000017166138,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8323521614074707},{"id":"https://openalex.org/keywords/transcription-factor","display_name":"Transcription factor","score":0.6657559275627136},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6636748909950256},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.6488271355628967},{"id":"https://openalex.org/keywords/promoter","display_name":"Promoter","score":0.6358111500740051},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.582348644733429},{"id":"https://openalex.org/keywords/dna-binding-site","display_name":"DNA binding site","score":0.5597552061080933},{"id":"https://openalex.org/keywords/transcription","display_name":"Transcription (linguistics)","score":0.5417938232421875},{"id":"https://openalex.org/keywords/binding-site","display_name":"Binding site","score":0.5238946676254272},{"id":"https://openalex.org/keywords/login","display_name":"Login","score":0.49121612310409546},{"id":"https://openalex.org/keywords/cis-regulatory-module","display_name":"Cis-regulatory module","score":0.43761342763900757},{"id":"https://openalex.org/keywords/dna","display_name":"DNA","score":0.4100492298603058},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.3008420467376709},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.11426085233688354}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8323521614074707},{"id":"https://openalex.org/C86339819","wikidata":"https://www.wikidata.org/wiki/Q407384","display_name":"Transcription factor","level":3,"score":0.6657559275627136},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6636748909950256},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.6488271355628967},{"id":"https://openalex.org/C101762097","wikidata":"https://www.wikidata.org/wiki/Q224093","display_name":"Promoter","level":4,"score":0.6358111500740051},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.582348644733429},{"id":"https://openalex.org/C3662595","wikidata":"https://www.wikidata.org/wiki/Q5205743","display_name":"DNA binding site","level":5,"score":0.5597552061080933},{"id":"https://openalex.org/C179926584","wikidata":"https://www.wikidata.org/wiki/Q207714","display_name":"Transcription (linguistics)","level":2,"score":0.5417938232421875},{"id":"https://openalex.org/C107824862","wikidata":"https://www.wikidata.org/wiki/Q616005","display_name":"Binding site","level":2,"score":0.5238946676254272},{"id":"https://openalex.org/C113324615","wikidata":"https://www.wikidata.org/wiki/Q472302","display_name":"Login","level":2,"score":0.49121612310409546},{"id":"https://openalex.org/C190796033","wikidata":"https://www.wikidata.org/wiki/Q1093165","display_name":"Cis-regulatory module","level":5,"score":0.43761342763900757},{"id":"https://openalex.org/C552990157","wikidata":"https://www.wikidata.org/wiki/Q7430","display_name":"DNA","level":2,"score":0.4100492298603058},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.3008420467376709},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.11426085233688354},{"id":"https://openalex.org/C138885662","wikidata":"https://www.wikidata.org/wiki/Q5891","display_name":"Philosophy","level":0,"score":0.0},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0},{"id":"https://openalex.org/C41895202","wikidata":"https://www.wikidata.org/wiki/Q8162","display_name":"Linguistics","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001665","descriptor_name":"Binding Sites","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011401","descriptor_name":"Promoter Regions, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014157","descriptor_name":"Transcription Factors","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkp464","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp464","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W247/16759230/gkp464.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19487240","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19487240","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:air.unimi.it:2434/147636","is_oa":true,"landing_page_url":"http://hdl.handle.net/2434/147636","pdf_url":null,"source":{"id":"https://openalex.org/S4306400516","display_name":"Archivio Istituzionale della Ricerca (Universita Degli Studi Di Milano)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I189158943","host_organization_name":"University of Milan","host_organization_lineage":["https://openalex.org/I189158943"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"info:eu-repo/semantics/article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2703934","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2703934","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:ricerca.uniba.it:11586/87229","is_oa":false,"landing_page_url":"http://hdl.handle.net/11586/87229","pdf_url":null,"source":{"id":"https://openalex.org/S4377196296","display_name":"CINECA IRIS Institutional Research Information System (University of Bari Aldo Moro)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I5561750","host_organization_name":"University of Bari Aldo Moro","host_organization_lineage":["https://openalex.org/I5561750"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"info:eu-repo/semantics/article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp464","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp464","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W247/16759230/gkp464.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G8091430692","display_name":null,"funder_award_id":"(MIUR)","funder_id":"https://openalex.org/F4320321873","funder_display_name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca"}],"funders":[{"id":"https://openalex.org/F4320321873","display_name":"Ministero dell\u2019Istruzione, dell\u2019Universit\u00e0 e della Ricerca","ror":"https://ror.org/0166hxq48"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2026731344.pdf","grobid_xml":"https://content.openalex.org/works/W2026731344.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1560191797","https://openalex.org/W1838422459","https://openalex.org/W1988871238","https://openalex.org/W2008900336","https://openalex.org/W2073977744","https://openalex.org/W2086240695","https://openalex.org/W2095718954","https://openalex.org/W2098024690","https://openalex.org/W2113833510","https://openalex.org/W2122683221","https://openalex.org/W2123490534","https://openalex.org/W2133045519","https://openalex.org/W2134550899","https://openalex.org/W2135030836","https://openalex.org/W2141408320","https://openalex.org/W2149769193","https://openalex.org/W2158107632"],"related_works":["https://openalex.org/W2036927633","https://openalex.org/W2146517458","https://openalex.org/W2153561273","https://openalex.org/W2152664145","https://openalex.org/W2079197459","https://openalex.org/W2067561164","https://openalex.org/W2165899269","https://openalex.org/W2236968607","https://openalex.org/W2146393977","https://openalex.org/W2106205246"],"abstract_inverted_index":{"The":[0,121],"first":[1],"step":[2],"in":[3,85,112],"gene":[4],"expression,":[5],"transcription,":[6],"is":[7,25,123,132],"modulated":[8],"by":[9],"the":[10,21,45,73,78,86,109],"interaction":[11],"of":[12,33,48,72,80,114],"transcription":[13,50,66],"factors":[14,51,67],"with":[15,42,77,94],"their":[16,81],"corresponding":[17],"binding":[18,46,83],"sites":[19,84],"on":[20,64],"DNA":[22],"sequence.":[23],"Pscan":[24,88],"a":[26,31],"software":[27],"tool":[28],"that":[29,101],"scans":[30],"set":[32],"sequences":[34,96],"(e.g.":[35],"promoters)":[36],"from":[37],"co-regulated":[38],"or":[39,59],"co-expressed":[40],"genes":[41,74],"motifs":[43,55],"describing":[44],"specificity":[47],"known":[49],"and":[52,97,118,125,130],"assesses":[53],"which":[54,65],"are":[56],"significantly":[57],"over-":[58],"under-represented,":[60],"providing":[61],"thus":[62],"hints":[63],"could":[68],"be":[69],"common":[70],"regulators":[71],"studied,":[75],"together":[76],"location":[79],"candidate":[82],"sequences.":[87],"does":[89],"not":[90],"resort":[91],"to":[92,105,127],"comparisons":[93],"orthologous":[95],"experimental":[98],"results":[99],"show":[100],"it":[102],"compares":[103],"favorably":[104],"other":[106],"tools":[107],"for":[108],"same":[110],"task":[111],"terms":[113],"false":[115],"positive":[116],"predictions":[117],"computation":[119],"time.":[120],"website":[122],"free":[124],"open":[126],"all":[128],"users":[129],"there":[131],"no":[133],"login":[134],"requirement.":[135],"Address:":[136],"http://www.beaconlab.it/pscan.":[137]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":22},{"year":2024,"cited_by_count":27},{"year":2023,"cited_by_count":22},{"year":2022,"cited_by_count":27},{"year":2021,"cited_by_count":32},{"year":2020,"cited_by_count":35},{"year":2019,"cited_by_count":26},{"year":2018,"cited_by_count":27},{"year":2017,"cited_by_count":25},{"year":2016,"cited_by_count":26},{"year":2015,"cited_by_count":19},{"year":2014,"cited_by_count":32},{"year":2013,"cited_by_count":28},{"year":2012,"cited_by_count":30}],"updated_date":"2026-03-14T08:43:22.919905","created_date":"2025-10-10T00:00:00"}
