{"id":"https://openalex.org/W2124649657","doi":"https://doi.org/10.1093/nar/gkp427","title":"ToppGene Suite for gene list enrichment analysis and candidate gene prioritization","display_name":"ToppGene Suite for gene list enrichment analysis and candidate gene prioritization","publication_year":2009,"publication_date":"2009-05-22","ids":{"openalex":"https://openalex.org/W2124649657","doi":"https://doi.org/10.1093/nar/gkp427","mag":"2124649657","pmid":"https://pubmed.ncbi.nlm.nih.gov/19465376"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp427","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp427","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W305/3956724/gkp427.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W305/3956724/gkp427.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5100714128","display_name":"Jing Chen","orcid":"https://orcid.org/0000-0002-6227-7393"},"institutions":[{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"J. Chen","raw_affiliation_strings":["Department of Environmental Health, University of Cincinnati, Cincinnati, OH, USA","Department of Environmental Health , University of Cincinnati , Cincinnati , OH , USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental Health, University of Cincinnati, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I63135867"]},{"raw_affiliation_string":"Department of Environmental Health , University of Cincinnati , Cincinnati , OH , USA","institution_ids":["https://openalex.org/I63135867"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5038673567","display_name":"Eric E. Bardes","orcid":"https://orcid.org/0000-0002-6690-1034"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"E. E. Bardes","raw_affiliation_strings":["Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247","https://openalex.org/I63135867"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5064856328","display_name":"Bruce J. Aronow","orcid":"https://orcid.org/0000-0001-5109-6514"},"institutions":[{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. J. Aronow","raw_affiliation_strings":["Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA"],"affiliations":[{"raw_affiliation_string":"Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247","https://openalex.org/I63135867"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5061689835","display_name":"Anil G. Jegga","orcid":"https://orcid.org/0000-0002-4881-7752"},"institutions":[{"id":"https://openalex.org/I92156820","display_name":"University of Cincinnati Medical Center","ror":"https://ror.org/02p72h367","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I92156820"]},{"id":"https://openalex.org/I1285204247","display_name":"Cincinnati Children's Hospital Medical Center","ror":"https://ror.org/01hcyya48","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1285204247"]},{"id":"https://openalex.org/I63135867","display_name":"University of Cincinnati","ror":"https://ror.org/01e3m7079","country_code":"US","type":"education","lineage":["https://openalex.org/I63135867"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"A. G. Jegga","raw_affiliation_strings":["Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and","Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA"],"affiliations":[{"raw_affiliation_string":"Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I92156820"]},{"raw_affiliation_string":"Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and","institution_ids":["https://openalex.org/I1285204247"]},{"raw_affiliation_string":"Department of Environmental Health, University of Cincinnati, 2Division of Biomedical Informatics, Cincinnati Children's Hospital Medical Center and 3Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, OH, USA","institution_ids":["https://openalex.org/I1285204247","https://openalex.org/I63135867"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5100714128"],"corresponding_institution_ids":["https://openalex.org/I63135867"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":17.3891,"has_fulltext":true,"cited_by_count":3117,"citation_normalized_percentile":{"value":0.99567297,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"37","issue":"Web Server","first_page":"W305","last_page":"W311"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10261","display_name":"Genetic Associations and Epidemiology","score":0.9876000285148621,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10885","display_name":"Gene expression and cancer classification","score":0.9832000136375427,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/candidate-gene","display_name":"Candidate gene","score":0.7051562666893005},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.599678635597229},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4936336278915405},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.48731645941734314},{"id":"https://openalex.org/keywords/semantic-similarity","display_name":"Semantic similarity","score":0.4751805365085602},{"id":"https://openalex.org/keywords/genome-wide-association-study","display_name":"Genome-wide association study","score":0.4699340760707855},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4505692720413208},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.3875771462917328},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3870663642883301},{"id":"https://openalex.org/keywords/single-nucleotide-polymorphism","display_name":"Single-nucleotide polymorphism","score":0.17810523509979248},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.17008906602859497},{"id":"https://openalex.org/keywords/genotype","display_name":"Genotype","score":0.07881507277488708}],"concepts":[{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.7051562666893005},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.599678635597229},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4936336278915405},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.48731645941734314},{"id":"https://openalex.org/C130318100","wikidata":"https://www.wikidata.org/wiki/Q2268914","display_name":"Semantic similarity","level":2,"score":0.4751805365085602},{"id":"https://openalex.org/C106208931","wikidata":"https://www.wikidata.org/wiki/Q1098876","display_name":"Genome-wide association study","level":5,"score":0.4699340760707855},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4505692720413208},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.3875771462917328},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3870663642883301},{"id":"https://openalex.org/C153209595","wikidata":"https://www.wikidata.org/wiki/Q501128","display_name":"Single-nucleotide polymorphism","level":4,"score":0.17810523509979248},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.17008906602859497},{"id":"https://openalex.org/C135763542","wikidata":"https://www.wikidata.org/wiki/Q106016","display_name":"Genotype","level":3,"score":0.07881507277488708}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004194","descriptor_name":"Disease","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkp427","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp427","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W305/3956724/gkp427.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19465376","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19465376","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.358.2901","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.358.2901","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/e1/44/Nucleic_Acids_Res_2009_Jul_1_37(Web_Server_issue)_W305-W311.tar.gz","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2703978","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2703978","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp427","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp427","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W305/3956724/gkp427.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2124649657.pdf","grobid_xml":"https://content.openalex.org/works/W2124649657.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W1516032812","https://openalex.org/W1525985997","https://openalex.org/W1605637875","https://openalex.org/W1966519033","https://openalex.org/W1978558026","https://openalex.org/W1994803330","https://openalex.org/W2014022465","https://openalex.org/W2030784582","https://openalex.org/W2032755318","https://openalex.org/W2083045667","https://openalex.org/W2088449391","https://openalex.org/W2089817566","https://openalex.org/W2090324934","https://openalex.org/W2097498614","https://openalex.org/W2098450085","https://openalex.org/W2099495349","https://openalex.org/W2099656145","https://openalex.org/W2100251770","https://openalex.org/W2101181377","https://openalex.org/W2102427034","https://openalex.org/W2105813018","https://openalex.org/W2108071296","https://openalex.org/W2108181223","https://openalex.org/W2109473868","https://openalex.org/W2109555487","https://openalex.org/W2110878879","https://openalex.org/W2119220491","https://openalex.org/W2122621644","https://openalex.org/W2123280311","https://openalex.org/W2128245545","https://openalex.org/W2131397321","https://openalex.org/W2132056568","https://openalex.org/W2135586354","https://openalex.org/W2137633946","https://openalex.org/W2140675235","https://openalex.org/W2153252598","https://openalex.org/W2153280946","https://openalex.org/W2155699197","https://openalex.org/W2156070536","https://openalex.org/W2156750171","https://openalex.org/W2165872127","https://openalex.org/W2917431650","https://openalex.org/W2966207845","https://openalex.org/W4255855797"],"related_works":["https://openalex.org/W2361861616","https://openalex.org/W2263699433","https://openalex.org/W2377979023","https://openalex.org/W2218034408","https://openalex.org/W2392921965","https://openalex.org/W2358755282","https://openalex.org/W2625833328","https://openalex.org/W3103888630","https://openalex.org/W3042542048","https://openalex.org/W3132065130"],"abstract_inverted_index":{"ToppGene":[0,145,161],"Suite":[1,146],"(http://toppgene.cchmc.org;":[2],"this":[3],"web":[4],"site":[5],"is":[6,21,102],"free":[7],"and":[8,13,42,45,122,132,135],"open":[9],"to":[10,19,66],"all":[11],"users":[12],"does":[14],"not":[15],"require":[16],"a":[17,22,62,99],"login":[18],"access)":[20],"one-stop":[23],"portal":[24],"for":[25],"(i)":[26],"gene":[27,33,59,101,118],"list":[28],"functional":[29,37],"enrichment,":[30],"(ii)":[31],"candidate":[32,50,58,117,167,180],"prioritization":[34,46,60,119],"using":[35,90,147],"either":[36],"annotations":[38],"or":[39],"network":[40,114],"analysis":[41,125],"(iii)":[43],"identification":[44],"of":[47,95,98,107,129,144,164,177],"novel":[48,155],"disease":[49,57,116,156],"genes":[51,73,168,181],"in":[52],"the":[53,68,108,130,136,142,170,183],"interactome.":[54],"Functional":[55],"annotation-based":[56],"uses":[61,120],"fuzzy-based":[63],"similarity":[64,69,79],"measure":[65],"compute":[67],"between":[70],"any":[71],"two":[72],"based":[74],"on":[75],"semantic":[76],"annotations.":[77],"The":[78,111],"scores":[80],"from":[81],"individual":[82],"features":[83],"are":[84],"combined":[85],"into":[86],"an":[87],"overall":[88],"score":[89],"statistical":[91],"meta-analysis.":[92],"A":[93],"P-value":[94],"each":[96],"annotation":[97],"test":[100],"derived":[103],"by":[104],"random":[105],"sampling":[106],"whole":[109],"genome.":[110],"protein-protein":[112],"interaction":[113],"(PPIN)-based":[115],"social":[121],"Web":[123],"networks":[124],"algorithms":[126],"(extended":[127],"versions":[128],"PageRank":[131],"HITS":[133],"algorithms,":[134],"K-Step":[137],"Markov":[138],"method).":[139],"We":[140],"demonstrate":[141],"utility":[143],"20":[148,165],"recently":[149],"reported":[150],"GWAS-based":[151],"gene-disease":[152],"associations":[153],"(including":[154],"genes)":[157],"representing":[158],"five":[159],"diseases.":[160],"ranked":[162,175],"19":[163],"(95%)":[166],"within":[169],"top":[171,184],"20%,":[172],"while":[173],"ToppNet":[174],"12":[176],"16":[178],"(75%)":[179],"among":[182],"20%.":[185]},"counts_by_year":[{"year":2026,"cited_by_count":36},{"year":2025,"cited_by_count":220},{"year":2024,"cited_by_count":283},{"year":2023,"cited_by_count":291},{"year":2022,"cited_by_count":348},{"year":2021,"cited_by_count":364},{"year":2020,"cited_by_count":345},{"year":2019,"cited_by_count":292},{"year":2018,"cited_by_count":243},{"year":2017,"cited_by_count":167},{"year":2016,"cited_by_count":117},{"year":2015,"cited_by_count":122},{"year":2014,"cited_by_count":92},{"year":2013,"cited_by_count":67},{"year":2012,"cited_by_count":58}],"updated_date":"2026-04-12T07:58:50.170612","created_date":"2025-10-10T00:00:00"}
