{"id":"https://openalex.org/W2170676467","doi":"https://doi.org/10.1093/nar/gkp370","title":"PhyloPars: estimation of missing parameter values using phylogeny","display_name":"PhyloPars: estimation of missing parameter values using phylogeny","publication_year":2009,"publication_date":"2009-05-13","ids":{"openalex":"https://openalex.org/W2170676467","doi":"https://doi.org/10.1093/nar/gkp370","mag":"2170676467","pmid":"https://pubmed.ncbi.nlm.nih.gov/19443453"},"language":"ca","primary_location":{"id":"doi:10.1093/nar/gkp370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp370","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W179/16758399/gkp370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W179/16758399/gkp370.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5084468185","display_name":"Jorn Bruggeman","orcid":"https://orcid.org/0000-0003-2493-2323"},"institutions":[{"id":"https://openalex.org/I911458345","display_name":"Amsterdam UMC Location VUmc","ror":"https://ror.org/00q6h8f30","country_code":"NL","type":"healthcare","lineage":["https://openalex.org/I4210151833","https://openalex.org/I911458345"]}],"countries":["NL"],"is_corresponding":true,"raw_author_name":"Jorn Bruggeman","raw_affiliation_strings":["Department of Theoretical Biology, Faculty of Earth & Life Sciences, VU University Amsterdam, The Netherlands. jorn.bruggeman@falw.vu.nl","Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Department of Theoretical Biology, Faculty of Earth & Life Sciences, VU University Amsterdam, The Netherlands. jorn.bruggeman@falw.vu.nl","institution_ids":["https://openalex.org/I911458345"]},{"raw_affiliation_string":"Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5108522619","display_name":"Jaap Heringa","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Jaap Heringa","raw_affiliation_strings":["Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5074330888","display_name":"Bernd W. Brandt","orcid":"https://orcid.org/0000-0002-1155-1989"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Bernd W. Brandt","raw_affiliation_strings":["Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands"],"affiliations":[{"raw_affiliation_string":"Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","institution_ids":[]},{"raw_affiliation_string":"Department of Theoretical Biology, Faculty of Earth & Life Sciences and 2Centre for Integrative Bioinformatics (IBIVU), VU University Amsterdam, The Netherlands","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5084468185"],"corresponding_institution_ids":["https://openalex.org/I911458345"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.0099,"has_fulltext":true,"cited_by_count":148,"citation_normalized_percentile":{"value":0.91236569,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":90,"max":100},"biblio":{"volume":"37","issue":"suppl_2","first_page":"W179","last_page":"W184"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11354","display_name":"Evolution and Paleontology Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11354","display_name":"Evolution and Paleontology Studies","score":0.9965000152587891,"subfield":{"id":"https://openalex.org/subfields/1911","display_name":"Paleontology"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.992900013923645,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10487","display_name":"Plant and animal studies","score":0.9901000261306763,"subfield":{"id":"https://openalex.org/subfields/1105","display_name":"Ecology, Evolution, Behavior and Systematics"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7963972091674805},{"id":"https://openalex.org/keywords/phylogenetics","display_name":"Phylogenetics","score":0.7113839387893677},{"id":"https://openalex.org/keywords/missing-data","display_name":"Missing data","score":0.6868783235549927},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.5649129748344421},{"id":"https://openalex.org/keywords/range","display_name":"Range (aeronautics)","score":0.5149067640304565},{"id":"https://openalex.org/keywords/complement","display_name":"Complement (music)","score":0.48901233077049255},{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.4562905430793762},{"id":"https://openalex.org/keywords/phylogenetic-tree","display_name":"Phylogenetic tree","score":0.43035751581192017},{"id":"https://openalex.org/keywords/estimation","display_name":"Estimation","score":0.42823225259780884},{"id":"https://openalex.org/keywords/estimation-theory","display_name":"Estimation theory","score":0.41664713621139526},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.396236777305603},{"id":"https://openalex.org/keywords/statistics","display_name":"Statistics","score":0.3251582086086273},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.3205321431159973},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2825573682785034},{"id":"https://openalex.org/keywords/machine-learning","display_name":"Machine learning","score":0.2072380781173706},{"id":"https://openalex.org/keywords/mathematics","display_name":"Mathematics","score":0.14373531937599182},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.12492978572845459},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08706659078598022}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7963972091674805},{"id":"https://openalex.org/C90132467","wikidata":"https://www.wikidata.org/wiki/Q171184","display_name":"Phylogenetics","level":3,"score":0.7113839387893677},{"id":"https://openalex.org/C9357733","wikidata":"https://www.wikidata.org/wiki/Q6878417","display_name":"Missing data","level":2,"score":0.6868783235549927},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.5649129748344421},{"id":"https://openalex.org/C204323151","wikidata":"https://www.wikidata.org/wiki/Q905424","display_name":"Range (aeronautics)","level":2,"score":0.5149067640304565},{"id":"https://openalex.org/C112313634","wikidata":"https://www.wikidata.org/wiki/Q7886648","display_name":"Complement (music)","level":5,"score":0.48901233077049255},{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.4562905430793762},{"id":"https://openalex.org/C193252679","wikidata":"https://www.wikidata.org/wiki/Q242125","display_name":"Phylogenetic tree","level":3,"score":0.43035751581192017},{"id":"https://openalex.org/C96250715","wikidata":"https://www.wikidata.org/wiki/Q965330","display_name":"Estimation","level":2,"score":0.42823225259780884},{"id":"https://openalex.org/C167928553","wikidata":"https://www.wikidata.org/wiki/Q1376021","display_name":"Estimation theory","level":2,"score":0.41664713621139526},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.396236777305603},{"id":"https://openalex.org/C105795698","wikidata":"https://www.wikidata.org/wiki/Q12483","display_name":"Statistics","level":1,"score":0.3251582086086273},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.3205321431159973},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2825573682785034},{"id":"https://openalex.org/C119857082","wikidata":"https://www.wikidata.org/wiki/Q2539","display_name":"Machine learning","level":1,"score":0.2072380781173706},{"id":"https://openalex.org/C33923547","wikidata":"https://www.wikidata.org/wiki/Q395","display_name":"Mathematics","level":0,"score":0.14373531937599182},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.12492978572845459},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08706659078598022},{"id":"https://openalex.org/C187736073","wikidata":"https://www.wikidata.org/wiki/Q2920921","display_name":"Management","level":1,"score":0.0},{"id":"https://openalex.org/C188082640","wikidata":"https://www.wikidata.org/wiki/Q1780899","display_name":"Complementation","level":4,"score":0.0},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.0},{"id":"https://openalex.org/C162324750","wikidata":"https://www.wikidata.org/wiki/Q8134","display_name":"Economics","level":0,"score":0.0},{"id":"https://openalex.org/C159985019","wikidata":"https://www.wikidata.org/wiki/Q181790","display_name":"Composite material","level":1,"score":0.0},{"id":"https://openalex.org/C127716648","wikidata":"https://www.wikidata.org/wiki/Q104053","display_name":"Phenotype","level":3,"score":0.0},{"id":"https://openalex.org/C192562407","wikidata":"https://www.wikidata.org/wiki/Q228736","display_name":"Materials science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010641","descriptor_name":"Phenotype","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010802","descriptor_name":"Phylogeny","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000145","qualifier_name":"classification","is_major_topic":false},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D010839","descriptor_name":"Phytoplankton","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":7,"locations":[{"id":"doi:10.1093/nar/gkp370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp370","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W179/16758399/gkp370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19443453","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19443453","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:research.vu.nl:openaire_cris_publications/34766833-c365-4f81-9422-7ca7d5fb6a7d","is_oa":true,"landing_page_url":"https://research.vu.nl/en/publications/34766833-c365-4f81-9422-7ca7d5fb6a7d","pdf_url":"https://research.vu.nl/ws/files/2616640/PMC2703881.pdf","source":{"id":"https://openalex.org/S4306401107","display_name":"VU Research Portal","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Bruggeman, J, Heringa, J & Brandt, B W 2009, 'PhyloPars: estimation of missing parameter values using phylogeny.', Nucleic Acids Research, vol. 37, pp. W179-W184. https://doi.org/10.1093/nar/gkp370","raw_type":"info:eu-repo/semantics/publishedVersion"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.812.181","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.812.181","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/ca/97/gkp370.PMC2703881.pdf","raw_type":"text"},{"id":"pmh:oai:dare.ubvu.vu.nl:1871/20243","is_oa":false,"landing_page_url":"http://hdl.handle.net/1871/20243","pdf_url":null,"source":{"id":"https://openalex.org/S4306400546","display_name":"Digital Academic REpository of VU University Amsterdam (Vrije Universiteit Amsterdam)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I865915315","host_organization_name":"Vrije Universiteit Amsterdam","host_organization_lineage":["https://openalex.org/I865915315"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"37","raw_type":"Article / Letter to editor"},{"id":"pmh:oai:ora.ox.ac.uk:uuid:d7aeec37-a1cf-406a-bc3c-3bfb13c1192a","is_oa":false,"landing_page_url":"https://ora.ox.ac.uk/objects/uuid:d7aeec37-a1cf-406a-bc3c-3bfb13c1192a","pdf_url":null,"source":{"id":"https://openalex.org/S4306402636","display_name":"Oxford University Research Archive (ORA) (University of Oxford)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I40120149","host_organization_name":"University of Oxford","host_organization_lineage":["https://openalex.org/I40120149"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Symplectic Elements at Oxford","raw_type":"Journal article"},{"id":"pmh:oai:pubmedcentral.nih.gov:2703881","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2703881","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp370","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W179/16758399/gkp370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/15","score":0.6100000143051147,"display_name":"Life in Land"}],"awards":[{"id":"https://openalex.org/G629491556","display_name":null,"funder_award_id":"(NWO)","funder_id":"https://openalex.org/F4320321800","funder_display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek"}],"funders":[{"id":"https://openalex.org/F4320320300","display_name":"European Commission","ror":"https://ror.org/00k4n6c32"},{"id":"https://openalex.org/F4320321800","display_name":"Nederlandse Organisatie voor Wetenschappelijk Onderzoek","ror":"https://ror.org/04jsz6e67"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2170676467.pdf","grobid_xml":"https://content.openalex.org/works/W2170676467.grobid-xml"},"referenced_works_count":44,"referenced_works":["https://openalex.org/W60615445","https://openalex.org/W191281502","https://openalex.org/W1480928214","https://openalex.org/W1522629818","https://openalex.org/W1972790352","https://openalex.org/W1990157150","https://openalex.org/W1990221500","https://openalex.org/W1994704190","https://openalex.org/W1994977766","https://openalex.org/W1996458817","https://openalex.org/W2008130573","https://openalex.org/W2013410948","https://openalex.org/W2028562213","https://openalex.org/W2029833898","https://openalex.org/W2033775040","https://openalex.org/W2039933378","https://openalex.org/W2043145184","https://openalex.org/W2049797516","https://openalex.org/W2066562848","https://openalex.org/W2068065958","https://openalex.org/W2080843536","https://openalex.org/W2083114520","https://openalex.org/W2096525273","https://openalex.org/W2117066938","https://openalex.org/W2122239976","https://openalex.org/W2124123249","https://openalex.org/W2132543781","https://openalex.org/W2141885858","https://openalex.org/W2172599765","https://openalex.org/W2178572532","https://openalex.org/W2330806830","https://openalex.org/W3029645440","https://openalex.org/W3141430778","https://openalex.org/W3151346602","https://openalex.org/W4210323379","https://openalex.org/W4229666556","https://openalex.org/W4229703135","https://openalex.org/W4244700801","https://openalex.org/W4246179969","https://openalex.org/W4250297812","https://openalex.org/W4301014524","https://openalex.org/W6667678742","https://openalex.org/W6678276308","https://openalex.org/W7073732528"],"related_works":["https://openalex.org/W2944823289","https://openalex.org/W3024870410","https://openalex.org/W2410652950","https://openalex.org/W4380150146","https://openalex.org/W4283773154","https://openalex.org/W3037018281","https://openalex.org/W3139174110","https://openalex.org/W4289597203","https://openalex.org/W2972592048","https://openalex.org/W2358319515"],"abstract_inverted_index":{"A":[0],"wealth":[1],"of":[2,7,37,56,68,95,107,125,133,156,165],"information":[3,22,98],"on":[4,15,34],"metabolic":[5,157],"parameters":[6],"a":[8,47,65,77,115,131,162],"species":[9,16,36,61],"can":[10,23,103,160],"be":[11,104],"inferred":[12],"from":[13],"observations":[14,58],"that":[17,51,102],"are":[18,39],"phylogenetically":[19],"related.":[20],"Phylogeny-based":[21],"complement":[24],"direct":[25],"empirical":[26,57],"evidence,":[27],"and":[28,117,143,170],"is":[29,173],"particularly":[30],"valuable":[31],"if":[32],"experiments":[33],"the":[35,60,83,141],"interest":[38],"not":[40],"feasible.":[41],"The":[42,89,149],"PhyloPars":[43,172],"web":[44],"server":[45,150],"provides":[46,137],"statistically":[48],"consistent":[49],"method":[50],"combines":[52],"an":[53,105],"incomplete":[54,118],"set":[55,67],"with":[59,82,130],"phylogeny":[62,116],"to":[63,85,99,122],"produce":[64,100],"complete":[66],"parameter":[69],"estimates":[70,101,124],"for":[71,146,152],"all":[72,96,126],"species.":[73],"It":[74],"builds":[75],"upon":[76],"state-of-the-art":[78],"evolutionary":[79],"model,":[80],"extended":[81],"ability":[84],"handle":[86],"missing":[87,127],"data.":[88],"resulting":[90],"approach":[91],"makes":[92],"optimal":[93],"use":[94],"available":[97,174],"order":[106],"magnitude":[108],"more":[109],"accurate":[110],"than":[111],"ad-hoc":[112],"alternatives.":[113],"Uploading":[114],"feature":[119],"matrix":[120],"suffices":[121],"obtain":[123],"values,":[128],"along":[129],"measure":[132],"certainty.":[134],"Real-time":[135],"cross-validation":[136],"further":[138],"insight":[139],"in":[140],"accuracy":[142],"bias":[144],"expected":[145],"estimated":[147],"values.":[148],"allows":[151],"easy,":[153],"efficient":[154],"estimation":[155],"parameters,":[158],"which":[159],"benefit":[161],"wide":[163],"range":[164],"fields":[166],"including":[167],"systems":[168],"biology":[169],"ecology.":[171],"at:":[175],"http://www.ibi.vu.nl/programs/phylopars/.":[176]},"counts_by_year":[{"year":2026,"cited_by_count":5},{"year":2025,"cited_by_count":10},{"year":2024,"cited_by_count":8},{"year":2023,"cited_by_count":16},{"year":2022,"cited_by_count":9},{"year":2021,"cited_by_count":15},{"year":2020,"cited_by_count":11},{"year":2019,"cited_by_count":10},{"year":2018,"cited_by_count":6},{"year":2017,"cited_by_count":9},{"year":2016,"cited_by_count":6},{"year":2015,"cited_by_count":27},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":1}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
