{"id":"https://openalex.org/W2155874171","doi":"https://doi.org/10.1093/nar/gkp294","title":"MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression","display_name":"MicroRNA and mRNA integrated analysis (MMIA): a web tool for examining biological functions of microRNA expression","publication_year":2009,"publication_date":"2009-05-06","ids":{"openalex":"https://openalex.org/W2155874171","doi":"https://doi.org/10.1093/nar/gkp294","mag":"2155874171","pmid":"https://pubmed.ncbi.nlm.nih.gov/19420067"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkp294","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp294","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W356/16757650/gkp294.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W356/16757650/gkp294.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5081771012","display_name":"Seungyoon Nam","orcid":"https://orcid.org/0000-0002-0966-7915"},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4394709130","display_name":"Indiana University School of Medicine","ror":"https://ror.org/02ets8c94","country_code":null,"type":"education","lineage":["https://openalex.org/I4394709130","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Seungyoon Nam","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, Indianapolis, IN, USA","Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I55769427","https://openalex.org/I4394709130"]},{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100457407","display_name":"Meng Li","orcid":"https://orcid.org/0000-0001-8675-0758"},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Meng Li","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5024894867","display_name":"Kwangmin Choi","orcid":"https://orcid.org/0000-0003-4671-962X"},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kwangmin Choi","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5004086660","display_name":"Curtis Balch","orcid":null},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Curtis Balch","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100460439","display_name":"\ufeffSun Kim","orcid":"https://orcid.org/0000-0001-5385-9546"},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sun Kim","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]},{"author_position":"last","author":{"id":null,"display_name":"Kenneth P. Nephew","orcid":null},"institutions":[{"id":"https://openalex.org/I1283055418","display_name":"Indiana University Health","ror":"https://ror.org/01aaptx40","country_code":"US","type":"funder","lineage":["https://openalex.org/I1283055418","https://openalex.org/I4388446366","https://openalex.org/I592451"]},{"id":"https://openalex.org/I4210119109","display_name":"Indiana University Bloomington","ror":"https://ror.org/02k40bc56","country_code":"US","type":"education","lineage":["https://openalex.org/I4210119109","https://openalex.org/I592451"]},{"id":"https://openalex.org/I55769427","display_name":"Indiana University \u2013 Purdue University Indianapolis","ror":"https://ror.org/05gxnyn08","country_code":"US","type":"education","lineage":["https://openalex.org/I55769427","https://openalex.org/I592451"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Kenneth P. Nephew","raw_affiliation_strings":["Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Medical Sciences Program, Indiana University School of Medicine, 2Bioinformatics Program, School of Informatics, Indiana University, Bloomington and 3Indiana University Simon Cancer Center, Indianapolis, IN, USA","institution_ids":["https://openalex.org/I4210119109","https://openalex.org/I1283055418","https://openalex.org/I55769427"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5100460439"],"corresponding_institution_ids":["https://openalex.org/I1283055418","https://openalex.org/I4210119109","https://openalex.org/I55769427"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.7579,"has_fulltext":false,"cited_by_count":165,"citation_normalized_percentile":{"value":0.96976942,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":94,"max":100},"biblio":{"volume":"37","issue":"suppl_2","first_page":"W356","last_page":"W362"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10062","display_name":"MicroRNA in disease regulation","score":1.0,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10515","display_name":"Cancer-related molecular mechanisms research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1306","display_name":"Cancer Research"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8548793196678162},{"id":"https://openalex.org/keywords/microrna","display_name":"microRNA","score":0.8227705955505371},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.6458629369735718},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5554206371307373},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.5423172116279602},{"id":"https://openalex.org/keywords/regulation-of-gene-expression","display_name":"Regulation of gene expression","score":0.5170184373855591},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.46775364875793457},{"id":"https://openalex.org/keywords/messenger-rna","display_name":"Messenger RNA","score":0.4103431701660156},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.37526100873947144}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8548793196678162},{"id":"https://openalex.org/C145059251","wikidata":"https://www.wikidata.org/wiki/Q310899","display_name":"microRNA","level":3,"score":0.8227705955505371},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.6458629369735718},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5554206371307373},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.5423172116279602},{"id":"https://openalex.org/C165864922","wikidata":"https://www.wikidata.org/wiki/Q411391","display_name":"Regulation of gene expression","level":3,"score":0.5170184373855591},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.46775364875793457},{"id":"https://openalex.org/C105580179","wikidata":"https://www.wikidata.org/wiki/Q188928","display_name":"Messenger RNA","level":3,"score":0.4103431701660156},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.37526100873947144}],"mesh":[{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D034622","descriptor_name":"RNA Interference","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D035683","descriptor_name":"MicroRNAs","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkp294","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp294","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W356/16757650/gkp294.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19420067","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19420067","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2703907","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2703907","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkp294","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkp294","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_2/W356/16757650/gkp294.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Responsible consumption and production","id":"https://metadata.un.org/sdg/12","score":0.46000000834465027}],"awards":[],"funders":[],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":47,"referenced_works":["https://openalex.org/W191363855","https://openalex.org/W1648301895","https://openalex.org/W1815973596","https://openalex.org/W1975437957","https://openalex.org/W1990857807","https://openalex.org/W2006079840","https://openalex.org/W2006169630","https://openalex.org/W2017199818","https://openalex.org/W2017570593","https://openalex.org/W2023163614","https://openalex.org/W2027650876","https://openalex.org/W2028994878","https://openalex.org/W2030362521","https://openalex.org/W2050869737","https://openalex.org/W2059073003","https://openalex.org/W2070040905","https://openalex.org/W2072504660","https://openalex.org/W2072765451","https://openalex.org/W2079030291","https://openalex.org/W2082668371","https://openalex.org/W2083381199","https://openalex.org/W2094048386","https://openalex.org/W2094703935","https://openalex.org/W2095028416","https://openalex.org/W2100753831","https://openalex.org/W2100932663","https://openalex.org/W2104146201","https://openalex.org/W2122493934","https://openalex.org/W2128768066","https://openalex.org/W2130410032","https://openalex.org/W2134118500","https://openalex.org/W2137132557","https://openalex.org/W2141703917","https://openalex.org/W2142237411","https://openalex.org/W2145160583","https://openalex.org/W2149785901","https://openalex.org/W2150536104","https://openalex.org/W2152320398","https://openalex.org/W2153873185","https://openalex.org/W2154793065","https://openalex.org/W2160998038","https://openalex.org/W2162674813","https://openalex.org/W2168783124","https://openalex.org/W2171537806","https://openalex.org/W2740984310","https://openalex.org/W4232123484","https://openalex.org/W6607775720"],"related_works":["https://openalex.org/W2128583238","https://openalex.org/W2134405083","https://openalex.org/W2362348557","https://openalex.org/W2049907435","https://openalex.org/W2034500416","https://openalex.org/W2057742104","https://openalex.org/W2034377088","https://openalex.org/W4283692078","https://openalex.org/W2025542119","https://openalex.org/W2613929436"],"abstract_inverted_index":{"MicroRNAs":[0],"(miRNAs)":[1],"are":[2],"small":[3],"(19-24":[4],"nt),":[5],"nonprotein-coding":[6],"nucleic":[7],"acids":[8],"that":[9],"regulate":[10],"specific":[11,39],"'target'":[12],"gene":[13,51,116,127],"products":[14],"via":[15],"hybridization":[16],"to":[17,49,121,133],"mRNA":[18,73,100],"transcripts,":[19],"resulting":[20],"in":[21,32,47,119],"translational":[22],"blockade":[23],"or":[24],"transcript":[25,126],"degradation.":[26],"Although":[27],"miRNAs":[28],"have":[29,68],"been":[30],"implicated":[31],"numerous":[33],"developmental":[34],"and":[35,44,59,65,72,78,87,94,99,112,156,184],"adult":[36],"diseases,":[37],"their":[38],"impact":[40],"on":[41],"biological":[42,113,131,180],"pathways":[43,155],"cellular":[45],"phenotypes,":[46],"addition":[48,120],"miRNA":[50,63,89,98,105,124],"promoter":[52],"regulation,":[53,66],"remain":[54],"largely":[55],"unknown.":[56],"To":[57,129],"improve":[58],"facilitate":[60],"research":[61],"of":[62,123,178,186,189,192],"functions":[64,114],"we":[67],"developed":[69],"MMIA":[70,96,138],"(microRNA":[71],"integrated":[74,135],"analysis),":[75],"a":[76,172],"versatile":[77],"user-friendly":[79],"web":[80,163],"server.":[81],"By":[82],"incorporating":[83],"three":[84],"commonly":[85],"used":[86],"accurate":[88],"prediction":[90],"algorithms,":[91],"TargetScan,":[92],"PITA":[93],"PicTar,":[95],"integrates":[97],"expression":[101,188],"data":[102],"with":[103,171],"predicted":[104],"target":[106],"information":[107],"for":[108,175],"analyzing":[109],"miRNA-associated":[110],"phenotypes":[111],"by":[115],"set":[117],"analysis,":[118],"analysis":[122],"primary":[125],"promoters.":[128],"assign":[130],"relevance":[132],"the":[134,176,179,187],"miRNA/mRNA":[136],"profiles,":[137],"uses":[139],"exhaustive":[140],"human":[141],"genome":[142],"coverage,":[143],"including":[144],"classification":[145],"into":[146],"various":[147],"disease-associated":[148],"genes":[149],"as":[150,152],"well":[151],"conventional":[153],"canonical":[154],"Gene":[157],"Ontology.":[158],"In":[159],"summary,":[160],"this":[161,190],"novel":[162],"server":[164],"(cancer.informatics.indiana.edu/mmia)":[165],"will":[166],"provide":[167],"life":[168],"science":[169],"researchers":[170],"valuable":[173],"tool":[174],"study":[177],"(and":[181],"pathological)":[182],"causes":[183],"effects":[185],"class":[191],"interesting":[193],"protein":[194],"regulators.":[195]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":2},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":9},{"year":2017,"cited_by_count":16},{"year":2016,"cited_by_count":16},{"year":2015,"cited_by_count":15},{"year":2014,"cited_by_count":8},{"year":2013,"cited_by_count":17},{"year":2012,"cited_by_count":23}],"updated_date":"2026-05-19T21:40:30.786675","created_date":"2025-10-10T00:00:00"}