{"id":"https://openalex.org/W2160537483","doi":"https://doi.org/10.1093/nar/gkn905","title":"Update of the Diatom EST Database: a new tool for digital transcriptomics","display_name":"Update of the Diatom EST Database: a new tool for digital transcriptomics","publication_year":2008,"publication_date":"2008-11-24","ids":{"openalex":"https://openalex.org/W2160537483","doi":"https://doi.org/10.1093/nar/gkn905","mag":"2160537483","pmid":"https://pubmed.ncbi.nlm.nih.gov/19029140"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkn905","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn905","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D1001/3342317/gkn905.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D1001/3342317/gkn905.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5111652977","display_name":"Uma Maheswari","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I2802779139","display_name":"Stazione Zoologica Anton Dohrn","ror":"https://ror.org/03v5jj203","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2802779139"]},{"id":"https://openalex.org/I4210162280","display_name":"Laboratoire de G\u00e9ologie de l\u2019\u00c9cole Normale Sup\u00e9rieure","ror":"https://ror.org/05vg9cw43","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I2746051580","https://openalex.org/I29607241","https://openalex.org/I4210148025","https://openalex.org/I4210162280"]}],"countries":["FR","IT","US"],"is_corresponding":false,"raw_author_name":"U. Maheswari","raw_affiliation_strings":["CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France","CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France","institution_ids":["https://openalex.org/I4210162280","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5010443999","display_name":"Thomas M\u00f6ck","orcid":"https://orcid.org/0000-0001-9604-0362"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I2802779139","display_name":"Stazione Zoologica Anton Dohrn","ror":"https://ror.org/03v5jj203","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2802779139"]}],"countries":["FR","IT","US"],"is_corresponding":false,"raw_author_name":"T. Mock","raw_affiliation_strings":["CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica \u2018Anton Dohrn\u2019, Villa Comunale, I-80121 Naples, Italy","CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica \u2018Anton Dohrn\u2019, Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5111683376","display_name":"E. Virginia Armbrust","orcid":null},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I2802779139","display_name":"Stazione Zoologica Anton Dohrn","ror":"https://ror.org/03v5jj203","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2802779139"]}],"countries":["FR","IT","US"],"is_corresponding":false,"raw_author_name":"E. V. Armbrust","raw_affiliation_strings":["CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica \u2018Anton Dohrn\u2019, Villa Comunale, I-80121 Naples, Italy","CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica \u2018Anton Dohrn\u2019, Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]},{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5032942685","display_name":"Chris Bowler","orcid":"https://orcid.org/0000-0003-3835-6187"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I201448701","display_name":"University of Washington","ror":"https://ror.org/00cvxb145","country_code":"US","type":"education","lineage":["https://openalex.org/I201448701"]},{"id":"https://openalex.org/I2802779139","display_name":"Stazione Zoologica Anton Dohrn","ror":"https://ror.org/03v5jj203","country_code":"IT","type":"facility","lineage":["https://openalex.org/I2802779139"]}],"countries":["FR","IT","US"],"is_corresponding":true,"raw_author_name":"C. Bowler","raw_affiliation_strings":["CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"CNRS UMR8186, Department of Biology, Ecole Normale Sup\u00e9rieure, Paris, France, 2School of Oceanography, University of Washington, Seattle, WA 98195, USA and 3Stazione Zoologica 'Anton Dohrn', Villa Comunale, I-80121 Naples, Italy","institution_ids":["https://openalex.org/I2802779139","https://openalex.org/I201448701","https://openalex.org/I1294671590"]}]}],"institutions":[],"countries_distinct_count":3,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5032942685"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I201448701","https://openalex.org/I2802779139"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.4227,"has_fulltext":false,"cited_by_count":75,"citation_normalized_percentile":{"value":0.94474213,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"37","issue":"Database","first_page":"D1001","last_page":"D1005"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T12012","display_name":"Diatoms and Algae Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2502","display_name":"Biomaterials"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T12012","display_name":"Diatoms and Algae Research","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/2502","display_name":"Biomaterials"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9939000010490417,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10032","display_name":"Marine and coastal ecosystems","score":0.973800003528595,"subfield":{"id":"https://openalex.org/subfields/1910","display_name":"Oceanography"},"field":{"id":"https://openalex.org/fields/19","display_name":"Earth and Planetary Sciences"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/thalassiosira-pseudonana","display_name":"Thalassiosira pseudonana","score":0.9744815826416016},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.8690884113311768},{"id":"https://openalex.org/keywords/diatom","display_name":"Diatom","score":0.7819215059280396},{"id":"https://openalex.org/keywords/phaeodactylum-tricornutum","display_name":"Phaeodactylum tricornutum","score":0.7290074229240417},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.6403977870941162},{"id":"https://openalex.org/keywords/expressed-sequence-tag","display_name":"Expressed sequence tag","score":0.6378625631332397},{"id":"https://openalex.org/keywords/context","display_name":"Context (archaeology)","score":0.5896685719490051},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5144894123077393},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.48301538825035095},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.4800613820552826},{"id":"https://openalex.org/keywords/cdna-library","display_name":"cDNA library","score":0.44194066524505615},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4399428367614746},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.2719288170337677},{"id":"https://openalex.org/keywords/complementary-dna","display_name":"Complementary DNA","score":0.24028471112251282},{"id":"https://openalex.org/keywords/ecology","display_name":"Ecology","score":0.1349688470363617},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.074425607919693}],"concepts":[{"id":"https://openalex.org/C2777082925","wikidata":"https://www.wikidata.org/wiki/Q7709541","display_name":"Thalassiosira pseudonana","level":4,"score":0.9744815826416016},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.8690884113311768},{"id":"https://openalex.org/C2778902744","wikidata":"https://www.wikidata.org/wiki/Q162678","display_name":"Diatom","level":2,"score":0.7819215059280396},{"id":"https://openalex.org/C2780655307","wikidata":"https://www.wikidata.org/wiki/Q4911639","display_name":"Phaeodactylum tricornutum","level":3,"score":0.7290074229240417},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.6403977870941162},{"id":"https://openalex.org/C149034497","wikidata":"https://www.wikidata.org/wiki/Q1384835","display_name":"Expressed sequence tag","level":4,"score":0.6378625631332397},{"id":"https://openalex.org/C2779343474","wikidata":"https://www.wikidata.org/wiki/Q3109175","display_name":"Context (archaeology)","level":2,"score":0.5896685719490051},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5144894123077393},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.48301538825035095},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.4800613820552826},{"id":"https://openalex.org/C189482833","wikidata":"https://www.wikidata.org/wiki/Q869146","display_name":"cDNA library","level":4,"score":0.44194066524505615},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4399428367614746},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.2719288170337677},{"id":"https://openalex.org/C187882448","wikidata":"https://www.wikidata.org/wiki/Q283478","display_name":"Complementary DNA","level":3,"score":0.24028471112251282},{"id":"https://openalex.org/C18903297","wikidata":"https://www.wikidata.org/wiki/Q7150","display_name":"Ecology","level":1,"score":0.1349688470363617},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.074425607919693},{"id":"https://openalex.org/C142796444","wikidata":"https://www.wikidata.org/wiki/Q181394","display_name":"Nutrient","level":2,"score":0.0},{"id":"https://openalex.org/C151730666","wikidata":"https://www.wikidata.org/wiki/Q7205","display_name":"Paleontology","level":1,"score":0.0},{"id":"https://openalex.org/C2780892065","wikidata":"https://www.wikidata.org/wiki/Q184755","display_name":"Phytoplankton","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D017377","descriptor_name":"Diatoms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkn905","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn905","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D1001/3342317/gkn905.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19029140","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19029140","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2686495","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2686495","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:ueaeprints.uea.ac.uk:24494","is_oa":true,"landing_page_url":"https://ueaeprints.uea.ac.uk/id/eprint/24494/","pdf_url":null,"source":{"id":"https://openalex.org/S4306400384","display_name":"UEA Digital Repository (University of East Anglia)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1118541","host_organization_name":"University of East Anglia","host_organization_lineage":["https://openalex.org/I1118541"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkn905","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn905","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D1001/3342317/gkn905.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Life in Land","id":"https://metadata.un.org/sdg/15","score":0.6200000047683716}],"awards":[],"funders":[],"has_content":{"pdf":false,"grobid_xml":false},"content_urls":null,"referenced_works_count":32,"referenced_works":["https://openalex.org/W1964517129","https://openalex.org/W1982567238","https://openalex.org/W2004886936","https://openalex.org/W2007495128","https://openalex.org/W2013079196","https://openalex.org/W2013332594","https://openalex.org/W2013797892","https://openalex.org/W2027921745","https://openalex.org/W2029100467","https://openalex.org/W2037045595","https://openalex.org/W2044907855","https://openalex.org/W2049502393","https://openalex.org/W2055043387","https://openalex.org/W2075693891","https://openalex.org/W2076209159","https://openalex.org/W2100420410","https://openalex.org/W2100651579","https://openalex.org/W2104130360","https://openalex.org/W2107097013","https://openalex.org/W2108927741","https://openalex.org/W2116259191","https://openalex.org/W2117555911","https://openalex.org/W2128788810","https://openalex.org/W2137191341","https://openalex.org/W2139814408","https://openalex.org/W2145573696","https://openalex.org/W2150926065","https://openalex.org/W2154113980","https://openalex.org/W2159686118","https://openalex.org/W2162709121","https://openalex.org/W2166265186","https://openalex.org/W2167705142"],"related_works":["https://openalex.org/W2325150644","https://openalex.org/W2000485683","https://openalex.org/W2810855900","https://openalex.org/W2060102197","https://openalex.org/W2124482947","https://openalex.org/W1993095396","https://openalex.org/W1989290375","https://openalex.org/W4232213690","https://openalex.org/W2108927741","https://openalex.org/W2016226270"],"abstract_inverted_index":{"The":[0,54,96,161],"Diatom":[1,163],"Expressed":[2],"Sequence":[3],"Tag":[4],"(EST)":[5],"Database":[6,165],"was":[7],"constructed":[8],"to":[9,13,72,89,101,135],"provide":[10],"integral":[11],"access":[12],"ESTs":[14,31,40],"from":[15,32,41,45,60],"these":[16],"ecologically":[17],"and":[18,36,51,67,80,109,123,140,149],"evolutionarily":[19],"interesting":[20],"microalgae.":[21],"It":[22],"has":[23],"now":[24],"been":[25],"updated":[26,55,162],"with":[27],"130,000":[28],"Phaeodactylum":[29],"tricornutum":[30,108],"16":[33],"cDNA":[34],"libraries":[35,88],"77,000":[37],"Thalassiosira":[38],"pseudonana":[39],"seven":[42],"libraries,":[43],"derived":[44],"cells":[46],"grown":[47],"in":[48,83,86,92,150,154],"different":[49,78,87],"nutrient":[50],"stress":[52],"regimes.":[53],"relational":[56],"database":[57,97],"incorporates":[58,99],"results":[59],"statistical":[61],"analyses":[62],"such":[63],"as":[64],"log-likelihood":[65],"ratios":[66],"hierarchical":[68],"clustering,":[69],"which":[70],"help":[71],"identify":[73],"differentially":[74],"expressed":[75],"genes":[76,148],"under":[77],"conditions,":[79],"allow":[81],"similarities":[82],"gene":[84,143,152],"expression":[85,118],"be":[90],"investigated":[91],"a":[93],"functional":[94],"context.":[95],"also":[98],"links":[100],"the":[102,117,124],"recently":[103],"sequenced":[104],"genomes":[105],"of":[106,120,132,137,146,159],"P.":[107],"T.":[110],"pseudonana,":[111],"enabling":[112],"an":[113],"easy":[114],"cross-talk":[115],"between":[116],"pattern":[119],"diatom":[121,133],"orthologs":[122],"genome":[125],"browsers.":[126],"These":[127],"improvements":[128],"will":[129,141],"facilitate":[130],"exploration":[131],"responses":[134],"conditions":[136],"ecological":[138],"relevance":[139],"aid":[142],"function":[144],"identification":[145],"diatom-specific":[147],"silico":[151],"prediction":[153],"this":[155],"largely":[156],"unexplored":[157],"class":[158],"eukaryotes.":[160],"EST":[164],"is":[166],"available":[167],"at":[168],"http://www.biologie.ens.fr/diatomics/EST3.":[169]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":7},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":3},{"year":2019,"cited_by_count":4},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":5},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":4},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":5},{"year":2012,"cited_by_count":5}],"updated_date":"2026-07-02T09:51:11.867554","created_date":"2025-10-10T00:00:00"}
