{"id":"https://openalex.org/W2148781989","doi":"https://doi.org/10.1093/nar/gkn865","title":"Minimotif miner 2nd release: a database and web system for motif search","display_name":"Minimotif miner 2nd release: a database and web system for motif search","publication_year":2008,"publication_date":"2008-10-31","ids":{"openalex":"https://openalex.org/W2148781989","doi":"https://doi.org/10.1093/nar/gkn865","mag":"2148781989","pmid":"https://pubmed.ncbi.nlm.nih.gov/18978024"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkn865","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn865","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D185/3328589/gkn865.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D185/3328589/gkn865.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5034177039","display_name":"Sanguthevar Rajasekaran","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"S. Rajasekaran","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, USA. rajasek@engr.uconn.edu","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, USA. rajasek@engr.uconn.edu","institution_ids":["https://openalex.org/I140172145"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5001650068","display_name":"Shashank Balla","orcid":"https://orcid.org/0000-0001-9482-7030"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"S. Balla","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5020539900","display_name":"Patrick R Gradie","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"P. Gradie","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5073683942","display_name":"Michael R. Gryk","orcid":"https://orcid.org/0000-0002-3483-8384"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. R. Gryk","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5067316842","display_name":"Krishna Kadaveru","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"K. Kadaveru","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5007900967","display_name":"Vamsi Kundeti","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"V. Kundeti","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075089490","display_name":"Mark W. Maciejewski","orcid":"https://orcid.org/0000-0003-1217-1571"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. W. Maciejewski","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113724652","display_name":"Tiejuan Mi","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. Mi","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098292680","display_name":"N. Rubino","orcid":null},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N. Rubino","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5087468269","display_name":"Jatin M. Vyas","orcid":"https://orcid.org/0000-0002-9985-9565"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"J. Vyas","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5020526599","display_name":"Martin R. Schiller","orcid":"https://orcid.org/0000-0003-1671-6823"},"institutions":[{"id":"https://openalex.org/I1334819555","display_name":"Memorial Sloan Kettering Cancer Center","ror":"https://ror.org/02yrq0923","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I1334819555"]},{"id":"https://openalex.org/I140172145","display_name":"University of Connecticut","ror":"https://ror.org/02der9h97","country_code":"US","type":"education","lineage":["https://openalex.org/I140172145"]},{"id":"https://openalex.org/I75929689","display_name":"UConn Health","ror":"https://ror.org/02kzs4y22","country_code":"US","type":"healthcare","lineage":["https://openalex.org/I75929689"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"M. R. Schiller","raw_affiliation_strings":["Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2 Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3 Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I140172145","https://openalex.org/I75929689"]},{"raw_affiliation_string":"Department of Computer Science and Engineering, University of Connecticut, Storrs, CT 06029-2155, 2Department of Molecular, Microbial, and Structural Biology, Biological System Modeling Group, University of Connecticut Health Center, 263 Farmington Ave. Farmington, CT 06030-3305 and 3Memorial Sloan-Kettering Cancer Center, NY 10021, USA","institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I75929689"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5034177039"],"corresponding_institution_ids":["https://openalex.org/I1334819555","https://openalex.org/I140172145","https://openalex.org/I75929689"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":3.7702,"has_fulltext":true,"cited_by_count":67,"citation_normalized_percentile":{"value":0.941011,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":100},"biblio":{"volume":"37","issue":"Database","first_page":"D185","last_page":"D190"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11335","display_name":"Prion Diseases and Protein Misfolding","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9922999739646912,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.9904999732971191,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/alias","display_name":"Alias","score":0.8059645295143127},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7437951564788818},{"id":"https://openalex.org/keywords/motif","display_name":"Motif (music)","score":0.6824065446853638},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5087907910346985},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.501009464263916},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.42639297246932983},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3777327537536621},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.3247281312942505},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.26631516218185425}],"concepts":[{"id":"https://openalex.org/C46681722","wikidata":"https://www.wikidata.org/wiki/Q4725589","display_name":"Alias","level":2,"score":0.8059645295143127},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7437951564788818},{"id":"https://openalex.org/C32276052","wikidata":"https://www.wikidata.org/wiki/Q908349","display_name":"Motif (music)","level":2,"score":0.6824065446853638},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5087907910346985},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.501009464263916},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.42639297246932983},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3777327537536621},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.3247281312942505},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.26631516218185425},{"id":"https://openalex.org/C24890656","wikidata":"https://www.wikidata.org/wiki/Q82811","display_name":"Acoustics","level":1,"score":0.0},{"id":"https://openalex.org/C121332964","wikidata":"https://www.wikidata.org/wiki/Q413","display_name":"Physics","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011328","descriptor_name":"Prions","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020641","descriptor_name":"Polymorphism, Single Nucleotide","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D020816","descriptor_name":"Amino Acid Motifs","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054730","descriptor_name":"Protein Interaction Domains and Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054730","descriptor_name":"Protein Interaction Domains and Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054730","descriptor_name":"Protein Interaction Domains and Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054730","descriptor_name":"Protein Interaction Domains and Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D054730","descriptor_name":"Protein Interaction Domains and Motifs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":11,"locations":[{"id":"doi:10.1093/nar/gkn865","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn865","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D185/3328589/gkn865.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:18978024","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18978024","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2686579","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2686579","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.522.52","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.522.52","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.534.1966","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.534.1966","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2008/10/31/nar.gkn865.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.595.3796","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.595.3796","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/37/suppl_1/D185.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.867.2170","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.867.2170","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://digitalscholarship.unlv.edu/cgi/viewcontent.cgi?article%3D1438%26context%3Dsls_fac_articles","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.877.7634","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.877.7634","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/37/suppl_1/D185.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.883.2254","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.883.2254","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://europepmc.org/backend/ptpmcrender.fcgi?accid%3DPMC2686579%26blobtype%3Dpdf","raw_type":"text"},{"id":"pmh:oai:digitalscholarship.unlv.edu:sls_fac_articles-1438","is_oa":true,"landing_page_url":"https://digitalscholarship.unlv.edu/sls_fac_articles/157","pdf_url":null,"source":{"id":"https://openalex.org/S4377196371","display_name":"Digital Scholarship - UNLV (University of Nevada Reno)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134113660","host_organization_name":"University of Nevada, Reno","host_organization_lineage":["https://openalex.org/I134113660"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc-sa","license_id":"https://openalex.org/licenses/cc-by-nc-sa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Life Sciences Faculty Publications","raw_type":"text"},{"id":"pmh:oai:oasis.library.unlv.edu:sls_fac_articles-1438","is_oa":true,"landing_page_url":"https://oasis.library.unlv.edu/sls_fac_articles/157","pdf_url":null,"source":{"id":"https://openalex.org/S4377196371","display_name":"Digital Scholarship - UNLV (University of Nevada Reno)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I134113660","host_organization_name":"University of Nevada, Reno","host_organization_lineage":["https://openalex.org/I134113660"],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by","license_id":"https://openalex.org/licenses/cc-by","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Life Sciences Faculty Research","raw_type":"article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkn865","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn865","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D185/3328589/gkn865.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G1580173716","display_name":null,"funder_award_id":"AI078708","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G1682112769","display_name":null,"funder_award_id":"R21 AI078708","funder_id":"https://openalex.org/F4320337355","funder_display_name":"National Institute of Allergy and Infectious Diseases"},{"id":"https://openalex.org/G4707202857","display_name":"ITR:      Information Extraction from Massive Data Sets","funder_award_id":"0326155","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"},{"id":"https://openalex.org/G5475314811","display_name":null,"funder_award_id":"GM079689","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"},{"id":"https://openalex.org/G63802115","display_name":null,"funder_award_id":"R01 GM 079689","funder_id":"https://openalex.org/F4320337354","funder_display_name":"National Institute of General Medical Sciences"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337354","display_name":"National Institute of General Medical Sciences","ror":"https://ror.org/04q48ey07"},{"id":"https://openalex.org/F4320337355","display_name":"National Institute of Allergy and Infectious Diseases","ror":"https://ror.org/043z4tv69"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2148781989.pdf","grobid_xml":"https://content.openalex.org/works/W2148781989.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1559966695","https://openalex.org/W1836592012","https://openalex.org/W1947762817","https://openalex.org/W1964779874","https://openalex.org/W1968129408","https://openalex.org/W1974703047","https://openalex.org/W1989400359","https://openalex.org/W1995603206","https://openalex.org/W1996648035","https://openalex.org/W2011615466","https://openalex.org/W2014277911","https://openalex.org/W2045839655","https://openalex.org/W2048041842","https://openalex.org/W2060593022","https://openalex.org/W2078381702","https://openalex.org/W2082195960","https://openalex.org/W2085037886","https://openalex.org/W2092220530","https://openalex.org/W2096525273","https://openalex.org/W2097817417","https://openalex.org/W2117019496","https://openalex.org/W2117249420","https://openalex.org/W2121520117","https://openalex.org/W2125079066","https://openalex.org/W2133167066","https://openalex.org/W2134677161","https://openalex.org/W2135146619","https://openalex.org/W2135322665","https://openalex.org/W2143173841","https://openalex.org/W2163181687","https://openalex.org/W2166699767","https://openalex.org/W2168514491","https://openalex.org/W2170666908","https://openalex.org/W4230903726","https://openalex.org/W4231166943","https://openalex.org/W4246995357"],"related_works":["https://openalex.org/W4385605198","https://openalex.org/W2151266859","https://openalex.org/W2056017980","https://openalex.org/W2333004434","https://openalex.org/W4256550813","https://openalex.org/W1557487237","https://openalex.org/W4248617250","https://openalex.org/W275149381","https://openalex.org/W2997042634","https://openalex.org/W4386805122"],"abstract_inverted_index":{"Minimotif":[0],"Miner":[1],"(MnM)":[2],"consists":[3],"of":[4,15,69],"a":[5,9],"minimotif":[6],"database":[7,29],"and":[8,37,62],"web-based":[10],"application":[11],"that":[12],"enables":[13],"prediction":[14],"motif-based":[16],"functions":[17],"in":[18],"user-supplied":[19],"protein":[20],"queries.":[21],"We":[22],"have":[23],"revised":[24],"MnM":[25,73],"by":[26],"expanding":[27],"the":[28,39],"more":[30],"than":[31],"10-fold":[32],"to":[33],"approximately":[34],"5000":[35],"motifs":[36],"standardized":[38],"motif":[40],"function":[41],"definitions.":[42],"The":[43],"web-application":[44],"user":[45],"interface":[46],"has":[47],"been":[48],"redeveloped":[49],"with":[50],"new":[51],"features":[52],"including":[53],"improved":[54],"navigation,":[55],"screencast-driven":[56],"help,":[57],"support":[58],"for":[59,81],"alias":[60],"names":[61],"expanded":[63],"SNP":[64],"analysis.":[65],"A":[66],"sample":[67],"analysis":[68],"prion":[70],"shows":[71],"how":[72],"2":[74],"can":[75],"be":[76],"used.":[77],"Weblink:":[78],"http://mnm.engr.uconn.edu,":[79],"weblink":[80],"version":[82],"1":[83],"is":[84],"http://sms.engr.uconn.edu.":[85]},"counts_by_year":[{"year":2025,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":3},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":6},{"year":2012,"cited_by_count":13}],"updated_date":"2026-08-11T07:18:39.950985","created_date":"2025-10-10T00:00:00"}
