{"id":"https://openalex.org/W2007300748","doi":"https://doi.org/10.1093/nar/gkn835","title":"AutDB: a gene reference resource for autism research","display_name":"AutDB: a gene reference resource for autism research","publication_year":2008,"publication_date":"2008-11-10","ids":{"openalex":"https://openalex.org/W2007300748","doi":"https://doi.org/10.1093/nar/gkn835","mag":"2007300748","pmid":"https://pubmed.ncbi.nlm.nih.gov/19015121"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkn835","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn835","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D832/16758579/gkn835.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D832/16758579/gkn835.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113564992","display_name":"Saumyendra N. Basu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210134050","display_name":"MindSpec","ror":"https://ror.org/033p51247","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210134050"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Saumyendra N. Basu","raw_affiliation_strings":["MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031, USA","institution_ids":["https://openalex.org/I4210134050"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5047521545","display_name":"Ravi Kollu","orcid":null},"institutions":[{"id":"https://openalex.org/I4210134050","display_name":"MindSpec","ror":"https://ror.org/033p51247","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210134050"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Ravi Kollu","raw_affiliation_strings":["MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031","institution_ids":["https://openalex.org/I4210134050"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5000321153","display_name":"Sharmila Banerjee\u2010Basu","orcid":"https://orcid.org/0000-0003-3132-3489"},"institutions":[{"id":"https://openalex.org/I4210134050","display_name":"MindSpec","ror":"https://ror.org/033p51247","country_code":"US","type":"nonprofit","lineage":["https://openalex.org/I4210134050"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Sharmila Banerjee-Basu","raw_affiliation_strings":["MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"MindSpec Inc., 9656 Blake Lane, Fairfax, VA 22031","institution_ids":["https://openalex.org/I4210134050"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5000321153"],"corresponding_institution_ids":["https://openalex.org/I4210134050"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":4.8586,"has_fulltext":true,"cited_by_count":427,"citation_normalized_percentile":{"value":0.95705566,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"37","issue":"suppl_1","first_page":"D832","last_page":"D836"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10106","display_name":"Autism Spectrum Disorder Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10106","display_name":"Autism Spectrum Disorder Research","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2805","display_name":"Cognitive Neuroscience"},"field":{"id":"https://openalex.org/fields/28","display_name":"Neuroscience"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11135","display_name":"Virology and Viral Diseases","score":0.9779000282287598,"subfield":{"id":"https://openalex.org/subfields/2713","display_name":"Epidemiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11772","display_name":"Genetics and Neurodevelopmental Disorders","score":0.974399983882904,"subfield":{"id":"https://openalex.org/subfields/1311","display_name":"Genetics"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/autism","display_name":"Autism","score":0.8291500806808472},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7659569978713989},{"id":"https://openalex.org/keywords/autism-spectrum-disorder","display_name":"Autism spectrum disorder","score":0.6041133999824524},{"id":"https://openalex.org/keywords/candidate-gene","display_name":"Candidate gene","score":0.6022455096244812},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5756576657295227},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5618206262588501},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5130265951156616},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.487571656703949},{"id":"https://openalex.org/keywords/relevance","display_name":"Relevance (law)","score":0.4294228255748749},{"id":"https://openalex.org/keywords/gene-annotation","display_name":"Gene Annotation","score":0.41220107674598694},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.30114948749542236},{"id":"https://openalex.org/keywords/psychology","display_name":"Psychology","score":0.11135277152061462},{"id":"https://openalex.org/keywords/developmental-psychology","display_name":"Developmental psychology","score":0.0790029764175415}],"concepts":[{"id":"https://openalex.org/C205778803","wikidata":"https://www.wikidata.org/wiki/Q38404","display_name":"Autism","level":2,"score":0.8291500806808472},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7659569978713989},{"id":"https://openalex.org/C2778538070","wikidata":"https://www.wikidata.org/wiki/Q1436063","display_name":"Autism spectrum disorder","level":3,"score":0.6041133999824524},{"id":"https://openalex.org/C69991583","wikidata":"https://www.wikidata.org/wiki/Q1423575","display_name":"Candidate gene","level":3,"score":0.6022455096244812},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5756576657295227},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5618206262588501},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5130265951156616},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.487571656703949},{"id":"https://openalex.org/C158154518","wikidata":"https://www.wikidata.org/wiki/Q7310970","display_name":"Relevance (law)","level":2,"score":0.4294228255748749},{"id":"https://openalex.org/C2908923196","wikidata":"https://www.wikidata.org/wiki/Q5205742","display_name":"Gene Annotation","level":4,"score":0.41220107674598694},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.30114948749542236},{"id":"https://openalex.org/C15744967","wikidata":"https://www.wikidata.org/wiki/Q9418","display_name":"Psychology","level":0,"score":0.11135277152061462},{"id":"https://openalex.org/C138496976","wikidata":"https://www.wikidata.org/wiki/Q175002","display_name":"Developmental psychology","level":1,"score":0.0790029764175415},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D001321","descriptor_name":"Autistic Disorder","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001321","descriptor_name":"Autistic Disorder","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D001321","descriptor_name":"Autistic Disorder","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005796","descriptor_name":"Genes","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012015","descriptor_name":"Reference Standards","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012106","descriptor_name":"Research","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014644","descriptor_name":"Genetic Variation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020022","descriptor_name":"Genetic Predisposition to Disease","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkn835","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn835","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D832/16758579/gkn835.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:19015121","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/19015121","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.515.1891","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.515.1891","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/37/suppl_1/D832.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.656.7454","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.656.7454","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2686502/pdf/gkn835.pdf","raw_type":"text"},{"id":"pmh:oai:pubmedcentral.nih.gov:2686502","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2686502","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkn835","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn835","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D832/16758579/gkn835.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2007300748.pdf","grobid_xml":"https://content.openalex.org/works/W2007300748.grobid-xml"},"referenced_works_count":22,"referenced_works":["https://openalex.org/W98211599","https://openalex.org/W121915106","https://openalex.org/W134573160","https://openalex.org/W1971321176","https://openalex.org/W1983194657","https://openalex.org/W2005149292","https://openalex.org/W2056382717","https://openalex.org/W2067996390","https://openalex.org/W2071090844","https://openalex.org/W2080287250","https://openalex.org/W2088931596","https://openalex.org/W2092630887","https://openalex.org/W2119907069","https://openalex.org/W2123739801","https://openalex.org/W2125147395","https://openalex.org/W2134175099","https://openalex.org/W2151566815","https://openalex.org/W2158778721","https://openalex.org/W2163364301","https://openalex.org/W2171804213","https://openalex.org/W4234063125","https://openalex.org/W6605454747"],"related_works":["https://openalex.org/W2059565715","https://openalex.org/W2901823680","https://openalex.org/W1999129612","https://openalex.org/W2116418175","https://openalex.org/W2009940763","https://openalex.org/W2126804125","https://openalex.org/W2946410450","https://openalex.org/W4361192415","https://openalex.org/W2137318037","https://openalex.org/W4386637333"],"abstract_inverted_index":{"Recent":[0],"advances":[1],"in":[2,59,150,169],"studies":[3],"of":[4,29,47,107,113,136,146,153],"Autism":[5],"Spectrum":[6],"Disorders":[7],"(ASD)":[8],"has":[9],"uncovered":[10],"many":[11],"new":[12],"candidate":[13,148],"genes":[14,48,63,87,149],"and":[15,45,69,86,122],"continues":[16],"to":[17,50,65,72,89,100,125,140,176],"do":[18],"so":[19],"at":[20],"an":[21,104,142],"accelerated":[22],"pace.":[23],"To":[24],"address":[25],"the":[26,51,118,130,151,161],"genetic":[27,74,79],"complexity":[28],"ASD,":[30],"we":[31],"have":[32],"developed":[33],"AutDB":[34,60,114],"(http://www.mindspec.org/autdb.html),":[35],"a":[36,55],"publicly":[37],"available":[38],"web-portal":[39],"for":[40,97,156,165],"on-going":[41],"collection,":[42],"manual":[43],"annotation":[44],"visualization":[46],"linked":[49,88],"disorder.":[52,162],"We":[53],"present":[54],"disease-driven":[56],"database":[57],"model":[58,164],"where":[61],"all":[62],"connected":[64],"ASD":[66,147],"are":[67,94],"collected":[68],"classified":[70],"according":[71],"their":[73,98,108],"variation:":[75],"candidates":[76],"identified":[77],"from":[78,117],"association":[80],"studies,":[81],"rare":[82],"single":[83],"gene":[84],"mutations":[85],"syndromic":[90],"autism.":[91],"Gene":[92],"entries":[93],"richly":[95],"annotated":[96,144],"relevance":[99],"autism,":[101],"along":[102],"with":[103],"in-depth":[105],"view":[106],"molecular":[109,158],"functions.":[110],"The":[111,133],"content":[112],"originates":[115],"entirely":[116],"published":[119],"scientific":[120],"literature":[121],"is":[123,139],"organized":[124],"optimize":[126],"its":[127],"use":[128],"by":[129],"research":[131],"community.":[132],"main":[134],"focus":[135],"this":[137],"resource":[138],"provide":[141],"up-to-date,":[143],"list":[145],"form":[152],"reference":[154],"dataset":[155],"interrogating":[157],"mechanisms":[159],"underlying":[160],"Our":[163],"consolidated":[166],"knowledge":[167],"representation":[168],"genetically":[170],"complex":[171],"disorders":[172],"could":[173],"be":[174],"replicated":[175],"study":[177],"other":[178],"such":[179],"disorders.":[180]},"counts_by_year":[{"year":2026,"cited_by_count":7},{"year":2025,"cited_by_count":13},{"year":2024,"cited_by_count":28},{"year":2023,"cited_by_count":17},{"year":2022,"cited_by_count":26},{"year":2021,"cited_by_count":29},{"year":2020,"cited_by_count":40},{"year":2019,"cited_by_count":25},{"year":2018,"cited_by_count":25},{"year":2017,"cited_by_count":35},{"year":2016,"cited_by_count":38},{"year":2015,"cited_by_count":31},{"year":2014,"cited_by_count":35},{"year":2013,"cited_by_count":31},{"year":2012,"cited_by_count":11}],"updated_date":"2026-07-28T07:46:37.118299","created_date":"2025-10-10T00:00:00"}
