{"id":"https://openalex.org/W2096766502","doi":"https://doi.org/10.1093/nar/gkn653","title":"PID: the Pathway Interaction Database","display_name":"PID: the Pathway Interaction Database","publication_year":2008,"publication_date":"2008-10-02","ids":{"openalex":"https://openalex.org/W2096766502","doi":"https://doi.org/10.1093/nar/gkn653","mag":"2096766502","pmid":"https://pubmed.ncbi.nlm.nih.gov/18832364"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkn653","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn653","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D674/16757229/gkn653.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D674/16757229/gkn653.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5110081950","display_name":"Carl F. Schaefer","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Carl F. Schaefer","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA. schaefec@mail.nih.gov","National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA. schaefec@mail.nih.gov","institution_ids":["https://openalex.org/I4210140884"]},{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109137018","display_name":"Kira Anthony","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kira Anthony","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061418960","display_name":"Shiva Krupa","orcid":null},"institutions":[{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Shiva Krupa","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062884590","display_name":"Jeffrey Buchoff","orcid":null},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Jeffrey Buchoff","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5101963670","display_name":"Matthew Day","orcid":"https://orcid.org/0000-0003-4095-520X"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Matthew Day","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017461265","display_name":"Timo Hannay","orcid":"https://orcid.org/0000-0002-5941-3390"},"institutions":[{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]},{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Timo Hannay","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5014704347","display_name":"Kenneth H. Buetow","orcid":"https://orcid.org/0000-0003-4439-0939"},"institutions":[{"id":"https://openalex.org/I4210122838","display_name":"SRA International (United States)","ror":"https://ror.org/02n9cgn70","country_code":"US","type":"company","lineage":["https://openalex.org/I4210122838"]},{"id":"https://openalex.org/I4210140884","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I4210140884"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Kenneth H. Buetow","raw_affiliation_strings":["National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK"],"affiliations":[{"raw_affiliation_string":"National Cancer Institute, Center for Biomedical Informatics and Information Technology, Rockville MD, USA, 2Nature Publishing Group, Boston MA, USA, 3Novartis Knowledge Center, Cambridge MA, USA, 4SRA International, Inc., Health Research and Informatics, Fairfax VA, USA and 5Nature Publishing Group, London, UK","institution_ids":["https://openalex.org/I4210140884","https://openalex.org/I4210122838"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":7,"corresponding_author_ids":["https://openalex.org/A5110081950"],"corresponding_institution_ids":["https://openalex.org/I4210122838","https://openalex.org/I4210140884"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":19.637,"has_fulltext":true,"cited_by_count":1644,"citation_normalized_percentile":{"value":0.99657142,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":99,"max":100},"biblio":{"volume":"37","issue":"suppl_1","first_page":"D674","last_page":"D679"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9998000264167786,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11710","display_name":"Biomedical Text Mining and Ontologies","score":0.9908000230789185,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10252","display_name":"Microbial Natural Products and Biosynthesis","score":0.9887999892234802,"subfield":{"id":"https://openalex.org/subfields/2736","display_name":"Pharmacology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/upload","display_name":"Upload","score":0.651615560054779},{"id":"https://openalex.org/keywords/sbml","display_name":"SBML","score":0.589078426361084},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.5836158990859985},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.5205658078193665},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.5059263110160828},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.44754281640052795},{"id":"https://openalex.org/keywords/markup-language","display_name":"Markup language","score":0.44672688841819763},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4452447295188904},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.42393797636032104},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.41353359818458557},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3684391975402832},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.09730416536331177}],"concepts":[{"id":"https://openalex.org/C71901391","wikidata":"https://www.wikidata.org/wiki/Q7126699","display_name":"Upload","level":2,"score":0.651615560054779},{"id":"https://openalex.org/C87186988","wikidata":"https://www.wikidata.org/wiki/Q452197","display_name":"SBML","level":4,"score":0.589078426361084},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.5836158990859985},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5205658078193665},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.5059263110160828},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.44754281640052795},{"id":"https://openalex.org/C45874996","wikidata":"https://www.wikidata.org/wiki/Q37045","display_name":"Markup language","level":3,"score":0.44672688841819763},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4452447295188904},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.42393797636032104},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.41353359818458557},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3684391975402832},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.09730416536331177}],"mesh":[{"descriptor_ui":"D001692","descriptor_name":"Biological Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001692","descriptor_name":"Biological Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001692","descriptor_name":"Biological Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001692","descriptor_name":"Biological Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D001692","descriptor_name":"Biological Transport","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D002468","descriptor_name":"Cell Physiological Phenomena","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005786","descriptor_name":"Gene Expression Regulation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012313","descriptor_name":"RNA","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D015398","descriptor_name":"Signal Transduction","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D016208","descriptor_name":"Databases, Factual","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D025941","descriptor_name":"Protein Interaction Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkn653","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn653","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D674/16757229/gkn653.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:18832364","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18832364","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2686461","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2686461","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkn653","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn653","pdf_url":"https://academic.oup.com/nar/article-pdf/37/suppl_1/D674/16757229/gkn653.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2096766502.pdf","grobid_xml":"https://content.openalex.org/works/W2096766502.grobid-xml"},"referenced_works_count":15,"referenced_works":["https://openalex.org/W1975062706","https://openalex.org/W2001914359","https://openalex.org/W2023568503","https://openalex.org/W2025183726","https://openalex.org/W2037442572","https://openalex.org/W2103017472","https://openalex.org/W2120789186","https://openalex.org/W2123060905","https://openalex.org/W2132992030","https://openalex.org/W2134394193","https://openalex.org/W2135060646","https://openalex.org/W2137531873","https://openalex.org/W2155723007","https://openalex.org/W2917431650","https://openalex.org/W4229936717"],"related_works":["https://openalex.org/W2082621456","https://openalex.org/W2150908245","https://openalex.org/W2128782793","https://openalex.org/W2981332207","https://openalex.org/W2211443823","https://openalex.org/W2146744007","https://openalex.org/W2040642413","https://openalex.org/W3048335229","https://openalex.org/W2100525485","https://openalex.org/W3041939341"],"abstract_inverted_index":{"The":[0,162],"Pathway":[1],"Interaction":[2],"Database":[3],"(PID,":[4],"http://pid.nci.nih.gov)":[5],"is":[6,164],"a":[7,30,46,69,93],"freely":[8],"available":[9],"collection":[10],"of":[11,17,71,84,99,113,182],"curated":[12],"and":[13,21,24,38,54,65,122,145,154,172],"peer-reviewed":[14],"pathways":[15,85,129],"composed":[16],"human":[18],"molecular":[19,134],"signaling":[20],"regulatory":[22],"events":[23],"key":[25],"cellular":[26,58,97],"processes.":[27],"Created":[28],"in":[29,57,149],"collaboration":[31],"between":[32],"the":[33,42,50,81,103,132,179],"US":[34],"National":[35],"Cancer":[36],"Institute":[37],"Nature":[39],"Publishing":[40],"Group,":[41],"database":[43,147,163],"serves":[44],"as":[45,61,116],"research":[47,52],"tool":[48,106],"for":[49],"cancer":[51],"community":[53],"others":[55],"interested":[56],"pathways,":[59],"such":[60,115],"neuroscientists,":[62],"developmental":[63],"biologists":[64],"immunologists.":[66],"PID":[67],"offers":[68],"range":[70],"search":[72],"features":[73],"to":[74,109],"facilitate":[75],"pathway":[76,168],"exploration.":[77],"Users":[78,137],"can":[79,138],"browse":[80],"predefined":[82,128],"set":[83],"or":[86,96,130],"create":[87],"interaction":[88],"network":[89],"maps":[90],"centered":[91],"on":[92,178],"single":[94],"molecule":[95,141],"process":[98],"interest.":[100],"In":[101],"addition,":[102],"batch":[104],"query":[105],"allows":[107],"users":[108],"upload":[110],"long":[111],"list(s)":[112],"molecules,":[114],"those":[117],"derived":[118],"from":[119],"microarray":[120],"experiments,":[121],"either":[123],"overlay":[124],"these":[125],"molecules":[126],"onto":[127],"visualize":[131],"complete":[133,146],"connectivity":[135],"map.":[136],"also":[139],"download":[140],"lists,":[142],"citation":[143],"lists":[144],"content":[148,169],"extensible":[150],"markup":[151],"language":[152],"(XML)":[153],"Biological":[155],"Pathways":[156],"Exchange":[157],"(BioPAX)":[158],"Level":[159],"2":[160],"format.":[161],"updated":[165],"with":[166],"new":[167],"every":[170],"month":[171],"supplemented":[173],"by":[174],"specially":[175],"commissioned":[176],"articles":[177],"practical":[180],"uses":[181],"other":[183],"relevant":[184],"online":[185],"tools.":[186]},"counts_by_year":[{"year":2026,"cited_by_count":11},{"year":2025,"cited_by_count":60},{"year":2024,"cited_by_count":107},{"year":2023,"cited_by_count":107},{"year":2022,"cited_by_count":129},{"year":2021,"cited_by_count":115},{"year":2020,"cited_by_count":149},{"year":2019,"cited_by_count":118},{"year":2018,"cited_by_count":100},{"year":2017,"cited_by_count":86},{"year":2016,"cited_by_count":105},{"year":2015,"cited_by_count":117},{"year":2014,"cited_by_count":116},{"year":2013,"cited_by_count":104},{"year":2012,"cited_by_count":78}],"updated_date":"2026-04-04T16:13:02.066488","created_date":"2025-10-10T00:00:00"}
