{"id":"https://openalex.org/W2161370818","doi":"https://doi.org/10.1093/nar/gkn285","title":"Superimpose: a 3D structural superposition server","display_name":"Superimpose: a 3D structural superposition server","publication_year":2008,"publication_date":"2008-05-19","ids":{"openalex":"https://openalex.org/W2161370818","doi":"https://doi.org/10.1093/nar/gkn285","mag":"2161370818"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkn285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn285","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_2/W47/7628050/gkn285.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/36/suppl_2/W47/7628050/gkn285.pdf","any_repository_has_fulltext":false},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113565687","display_name":"Raymond A. Bauer","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"R. A. Bauer","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, Germany","Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, Germany","institution_ids":["https://openalex.org/I7877124"]},{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5075833022","display_name":"Philip E. Bourne","orcid":"https://orcid.org/0000-0002-7618-7292"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"P. E. Bourne","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5079436367","display_name":"Arno Formella","orcid":"https://orcid.org/0000-0002-4838-845X"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A. Formella","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5113643855","display_name":"C Fr\u00f6mmel","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"C. Frommel","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040090614","display_name":"Christoph Gille","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"C. Gille","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062823306","display_name":"Andrean Goede","orcid":"https://orcid.org/0000-0002-9044-9869"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A. Goede","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5032668613","display_name":"Aysam Guerler","orcid":"https://orcid.org/0000-0001-6513-2539"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A. Guerler","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5040707099","display_name":"Andreas Hoppe","orcid":"https://orcid.org/0000-0001-5181-6411"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A. Hoppe","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5084974774","display_name":"E. W. Knapp","orcid":"https://orcid.org/0000-0002-2858-0460"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"E.-W. Knapp","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045173095","display_name":"Thorsten P\u00f6schel","orcid":"https://orcid.org/0000-0001-5913-1070"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"T. Poschel","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109217036","display_name":"B. Wittig","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"B. Wittig","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071766437","display_name":"V. Ziegler","orcid":null},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"V. Ziegler","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043414157","display_name":"Robert Prei\u00dfner","orcid":"https://orcid.org/0000-0002-2407-1087"},"institutions":[{"id":"https://openalex.org/I39343248","display_name":"Humboldt-Universit\u00e4t zu Berlin","ror":"https://ror.org/01hcx6992","country_code":"DE","type":"education","lineage":["https://openalex.org/I39343248"]},{"id":"https://openalex.org/I75951250","display_name":"Freie Universit\u00e4t Berlin","ror":"https://ror.org/046ak2485","country_code":"DE","type":"education","lineage":["https://openalex.org/I75951250"]},{"id":"https://openalex.org/I7877124","display_name":"Charit\u00e9 - Universit\u00e4tsmedizin Berlin","ror":"https://ror.org/001w7jn25","country_code":"DE","type":"healthcare","lineage":["https://openalex.org/I7877124"]}],"countries":["DE"],"is_corresponding":true,"raw_author_name":"R. Preissner","raw_affiliation_strings":["Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Charit\u00e9-Universit\u00e4tsmedizin Berlin, Structural Bioinformatics Group, Arnimallee 22, 14195 Berlin, 2 Graduate School: Genomics and Systems Biology of Molecular Networks, Monbijoustr. 2, 10117 Berlin, 3 Institut f\u00fcr Molekularbiologie und Bioinformatik, Charit\u00e9-Universit\u00e4tsmedizin Berlin, Arnimallee 22, 14195 Berlin, Germany, 4 Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, 9500 Gilman Drive, La Jolla CA 92093-0743, USA, 5 University of Vigo, Computer Science Department, 32004 Ourense, Spain, 6 Georg-August-Universit\u00e4t G\u00f6ttingen, Medical University, Robert-Koch-Str. 42, 37075 G\u00f6ttingen, 7 Charit\u00e9, Computational Systems Biochemistry Group, Monbijoustr. 2, 10117 Berlin, 8 Freie Universit\u00e4t Berlin, Institut f\u00fcr Chemie und Biochemie, Takustr. 6, 14195 Berlin, 9 Universit\u00e4t Bayreuth, Physikalisches Institut, 95440 Bayreuth and 10 Humboldt-Universit\u00e4t zu Berlin, Algorithms and Complexity, Unter den Linden 6, 10099 Berlin, Germany","institution_ids":["https://openalex.org/I7877124","https://openalex.org/I75951250","https://openalex.org/I39343248"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":13,"corresponding_author_ids":["https://openalex.org/A5043414157"],"corresponding_institution_ids":["https://openalex.org/I39343248","https://openalex.org/I75951250","https://openalex.org/I7877124"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.5444,"has_fulltext":false,"cited_by_count":32,"citation_normalized_percentile":{"value":0.82584585,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"36","issue":"Web Server","first_page":"W47","last_page":"W54"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.9961000084877014,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7622907161712646},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7587641477584839},{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.7409117221832275},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5854043960571289},{"id":"https://openalex.org/keywords/structural-alignment","display_name":"Structural alignment","score":0.5497130751609802},{"id":"https://openalex.org/keywords/selection","display_name":"Selection (genetic algorithm)","score":0.48964744806289673},{"id":"https://openalex.org/keywords/similarity","display_name":"Similarity (geometry)","score":0.4883880019187927},{"id":"https://openalex.org/keywords/structural-bioinformatics","display_name":"Structural bioinformatics","score":0.46654605865478516},{"id":"https://openalex.org/keywords/structural-similarity","display_name":"Structural similarity","score":0.4599527418613434},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.41612038016319275},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.3770235478878021},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.37264788150787354},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.3665749132633209},{"id":"https://openalex.org/keywords/data-mining","display_name":"Data mining","score":0.33950936794281006},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.28004419803619385},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.212908536195755},{"id":"https://openalex.org/keywords/artificial-intelligence","display_name":"Artificial intelligence","score":0.2075967788696289},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.13718068599700928},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.13096368312835693},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.08627140522003174},{"id":"https://openalex.org/keywords/image","display_name":"Image (mathematics)","score":0.08479776978492737}],"concepts":[{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7622907161712646},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7587641477584839},{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.7409117221832275},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5854043960571289},{"id":"https://openalex.org/C4668613","wikidata":"https://www.wikidata.org/wiki/Q4116110","display_name":"Structural alignment","level":5,"score":0.5497130751609802},{"id":"https://openalex.org/C81917197","wikidata":"https://www.wikidata.org/wiki/Q628760","display_name":"Selection (genetic algorithm)","level":2,"score":0.48964744806289673},{"id":"https://openalex.org/C103278499","wikidata":"https://www.wikidata.org/wiki/Q254465","display_name":"Similarity (geometry)","level":3,"score":0.4883880019187927},{"id":"https://openalex.org/C69131567","wikidata":"https://www.wikidata.org/wiki/Q2068215","display_name":"Structural bioinformatics","level":3,"score":0.46654605865478516},{"id":"https://openalex.org/C139489369","wikidata":"https://www.wikidata.org/wiki/Q770846","display_name":"Structural similarity","level":2,"score":0.4599527418613434},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.41612038016319275},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.3770235478878021},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.37264788150787354},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.3665749132633209},{"id":"https://openalex.org/C124101348","wikidata":"https://www.wikidata.org/wiki/Q172491","display_name":"Data mining","level":1,"score":0.33950936794281006},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.28004419803619385},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.212908536195755},{"id":"https://openalex.org/C154945302","wikidata":"https://www.wikidata.org/wiki/Q11660","display_name":"Artificial intelligence","level":1,"score":0.2075967788696289},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.13718068599700928},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.13096368312835693},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.08627140522003174},{"id":"https://openalex.org/C115961682","wikidata":"https://www.wikidata.org/wiki/Q860623","display_name":"Image (mathematics)","level":2,"score":0.08479776978492737},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.0}],"mesh":[],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkn285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn285","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_2/W47/7628050/gkn285.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.496.3060","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.496.3060","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2008/05/20/nar.gkn285.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.496.7779","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.496.7779","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://bioinformatics.charite.de/main/content/publications/2008_Superimpose.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.498.7926","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.498.7926","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2008/05/20/nar.gkn285.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.499.8568","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.499.8568","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/36/suppl_2/W47.full-text-lowres.pdf","raw_type":"text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkn285","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkn285","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_2/W47/7628050/gkn285.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Industry, innovation and infrastructure","score":0.6499999761581421,"id":"https://metadata.un.org/sdg/9"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320320879","display_name":"Deutsche Forschungsgemeinschaft","ror":"https://ror.org/018mejw64"},{"id":"https://openalex.org/F4320323556","display_name":"Deutsche Krebshilfe","ror":"https://ror.org/01wxdd722"},{"id":"https://openalex.org/F4320337351","display_name":"National Cancer Institute","ror":"https://ror.org/040gcmg81"}],"has_content":{"grobid_xml":false,"pdf":false},"content_urls":null,"referenced_works_count":40,"referenced_works":["https://openalex.org/W1540930565","https://openalex.org/W1801992990","https://openalex.org/W1974105492","https://openalex.org/W1990696547","https://openalex.org/W1996295408","https://openalex.org/W2003932708","https://openalex.org/W2009313526","https://openalex.org/W2019538911","https://openalex.org/W2027751678","https://openalex.org/W2036106789","https://openalex.org/W2043362061","https://openalex.org/W2049961577","https://openalex.org/W2050083547","https://openalex.org/W2051872583","https://openalex.org/W2057332977","https://openalex.org/W2058407505","https://openalex.org/W2058813547","https://openalex.org/W2086003339","https://openalex.org/W2096317090","https://openalex.org/W2096525273","https://openalex.org/W2096960798","https://openalex.org/W2098278516","https://openalex.org/W2102245393","https://openalex.org/W2109000414","https://openalex.org/W2114370367","https://openalex.org/W2121293808","https://openalex.org/W2124358359","https://openalex.org/W2127780244","https://openalex.org/W2130479394","https://openalex.org/W2133657429","https://openalex.org/W2133715954","https://openalex.org/W2137146016","https://openalex.org/W2144998676","https://openalex.org/W2146087465","https://openalex.org/W2152326664","https://openalex.org/W2155480785","https://openalex.org/W2157491247","https://openalex.org/W2158309235","https://openalex.org/W2488413167","https://openalex.org/W4239678514"],"related_works":["https://openalex.org/W2084367350","https://openalex.org/W98859716","https://openalex.org/W2105364679","https://openalex.org/W2014499409","https://openalex.org/W2026882519","https://openalex.org/W2547795274","https://openalex.org/W4383473004","https://openalex.org/W2154685897","https://openalex.org/W2121593618","https://openalex.org/W2053281575"],"abstract_inverted_index":{"The":[0,80],"Superimpose":[1],"\u0301":[2],"webserver":[3],"performs":[4],"structural":[5],"similarity":[6],"searches":[7],"with":[8],"a":[9,39,58,72],"preference":[10],"towards":[11],"3D":[12],"structure-based":[13,81],"methods.":[14],"Similarities":[15],"can":[16],"be":[17],"detected":[18],"between":[19],"small":[20],"molecules":[21],"(e.g.":[22,28],"drugs),":[23],"parts":[24],"of":[25,31,41,57,61,75,92],"large":[26],"structures":[27],"binding":[29],"sites":[30],"proteins)":[32],"and":[33,45,63],"entire":[34],"proteins.":[35],"For":[36],"this":[37],"purpose,":[38],"number":[40],"algorithms":[42],"were":[43],"implemented":[44],"various":[46],"databases":[47],"are":[48],"provided.":[49,79],"Superimpose\u0301":[50],"assists":[51],"the":[52,55,66,76,90],"user":[53],"regarding":[54],"selection":[56],"suitable":[59],"combination":[60],"algorithm":[62],"database.":[64],"After":[65],"computation":[67],"on":[68],"our":[69],"server":[70],"infrastructure,":[71],"visual":[73],"assessment":[74],"results":[77],"is":[78],"in":[82],"silico":[83],"screening":[84],"for":[85],"similar":[86],"drug-like":[87],"compounds":[88],"enables":[89],"detection":[91]},"counts_by_year":[{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":1},{"year":2017,"cited_by_count":2},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":5},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-19T15:47:20.252518","created_date":"2025-10-10T00:00:00"}
