{"id":"https://openalex.org/W2127295545","doi":"https://doi.org/10.1093/nar/gkm924","title":"EPGD: a comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information","display_name":"EPGD: a comprehensive web resource for integrating and displaying eukaryotic paralog/paralogon information","publication_year":2007,"publication_date":"2007-11-05","ids":{"openalex":"https://openalex.org/W2127295545","doi":"https://doi.org/10.1093/nar/gkm924","mag":"2127295545","pmid":"https://pubmed.ncbi.nlm.nih.gov/17984073"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkm924","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm924","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D255/7633987/gkm924.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D255/7633987/gkm924.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5045411679","display_name":"Guolian Ding","orcid":"https://orcid.org/0000-0002-0099-9980"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"G. Ding","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, P. R. China","Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, P. R. China","institution_ids":["https://openalex.org/I4210106477"]},{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011411748","display_name":"Yu Sun","orcid":"https://orcid.org/0000-0003-4269-7187"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Y. Sun","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100338825","display_name":"Heng Li","orcid":"https://orcid.org/0000-0003-4874-2874"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"H. Li","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100441388","display_name":"Ziyi Wang","orcid":"https://orcid.org/0000-0003-3982-080X"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"Z. Wang","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5008089777","display_name":"Hang Fan","orcid":"https://orcid.org/0000-0002-4127-7140"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"H. Fan","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5071518021","display_name":"Chengshu Wang","orcid":"https://orcid.org/0000-0003-1477-1466"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"C. Wang","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"middle","author":{"id":null,"display_name":"D. Yang","orcid":null},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":false,"raw_author_name":"D. Yang","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100339213","display_name":"Ye Li","orcid":"https://orcid.org/0000-0002-2481-6894"},"institutions":[{"id":"https://openalex.org/I19820366","display_name":"Chinese Academy of Sciences","ror":"https://ror.org/034t30j35","country_code":"CN","type":"government","lineage":["https://openalex.org/I19820366"]},{"id":"https://openalex.org/I4210106477","display_name":"Shanghai Institutes for Biological Sciences","ror":"https://ror.org/011rf9d86","country_code":"CN","type":"facility","lineage":["https://openalex.org/I19820366","https://openalex.org/I4210106477"]},{"id":"https://openalex.org/I4210160507","display_name":"Center for Life Sciences","ror":"https://ror.org/05kje8j93","country_code":"CN","type":"education","lineage":["https://openalex.org/I20231570","https://openalex.org/I4210160507","https://openalex.org/I99065089"]}],"countries":["CN"],"is_corresponding":true,"raw_author_name":"Y. Li","raw_affiliation_strings":["Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Bioinformatics Center, Key Lab of Systems Biology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, 320 Yueyang Road, 2 Graduate School of the Chinese Academy of Sciences, Shanghai 200031, 3 Shanghai Center for Bioinformation Technology, 100 Qinzhou Road, Shanghai 200235 and 4 Shanghai Information Center for Life Sciences, Shanghai Institutes for Biology Science, Chinese Academy of Science, Shanghai 200031, P. R. China","institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":3,"corresponding_author_ids":["https://openalex.org/A5100339213"],"corresponding_institution_ids":["https://openalex.org/I19820366","https://openalex.org/I4210106477","https://openalex.org/I4210160507"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.1992,"has_fulltext":false,"cited_by_count":16,"citation_normalized_percentile":{"value":0.77986937,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"36","issue":"Database","first_page":"D255","last_page":"D262"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9998999834060669,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11879","display_name":"Protist diversity and phylogeny","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11791","display_name":"Microbial Community Ecology and Physiology","score":0.9923999905586243,"subfield":{"id":"https://openalex.org/subfields/2303","display_name":"Ecology"},"field":{"id":"https://openalex.org/fields/23","display_name":"Environmental Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7761702537536621},{"id":"https://openalex.org/keywords/gene-duplication","display_name":"Gene duplication","score":0.7574278116226196},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.7084397673606873},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.5578547120094299},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.5250016450881958},{"id":"https://openalex.org/keywords/gene-family","display_name":"Gene family","score":0.4571433365345001},{"id":"https://openalex.org/keywords/human-evolutionary-genetics","display_name":"Human evolutionary genetics","score":0.4496751129627228},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.42883968353271484},{"id":"https://openalex.org/keywords/evolutionary-biology","display_name":"Evolutionary biology","score":0.41677603125572205},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3436363637447357},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.16001883149147034},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.08425027132034302}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7761702537536621},{"id":"https://openalex.org/C7602840","wikidata":"https://www.wikidata.org/wiki/Q746284","display_name":"Gene duplication","level":3,"score":0.7574278116226196},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.7084397673606873},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.5578547120094299},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.5250016450881958},{"id":"https://openalex.org/C5911399","wikidata":"https://www.wikidata.org/wiki/Q2278983","display_name":"Gene family","level":4,"score":0.4571433365345001},{"id":"https://openalex.org/C167683757","wikidata":"https://www.wikidata.org/wiki/Q5937774","display_name":"Human evolutionary genetics","level":4,"score":0.4496751129627228},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.42883968353271484},{"id":"https://openalex.org/C78458016","wikidata":"https://www.wikidata.org/wiki/Q840400","display_name":"Evolutionary biology","level":1,"score":0.41677603125572205},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3436363637447357},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.16001883149147034},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.08425027132034302}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D019143","descriptor_name":"Evolution, Molecular","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020440","descriptor_name":"Gene Duplication","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkm924","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm924","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D255/7633987/gkm924.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17984073","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17984073","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2238967","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2238967","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkm924","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm924","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D255/7633987/gkm924.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":false},"content_urls":{"pdf":"https://content.openalex.org/works/W2127295545.pdf"},"referenced_works_count":34,"referenced_works":["https://openalex.org/W1487781539","https://openalex.org/W1513332069","https://openalex.org/W1907806866","https://openalex.org/W1963858560","https://openalex.org/W1971231926","https://openalex.org/W1973788898","https://openalex.org/W1982916472","https://openalex.org/W1988714210","https://openalex.org/W2000450945","https://openalex.org/W2011889195","https://openalex.org/W2019591778","https://openalex.org/W2038012561","https://openalex.org/W2076640361","https://openalex.org/W2095724872","https://openalex.org/W2096525273","https://openalex.org/W2096778187","https://openalex.org/W2101868204","https://openalex.org/W2115011276","https://openalex.org/W2119632499","https://openalex.org/W2121367329","https://openalex.org/W2129775611","https://openalex.org/W2137464714","https://openalex.org/W2139172909","https://openalex.org/W2144616092","https://openalex.org/W2146365989","https://openalex.org/W2147774240","https://openalex.org/W2148047088","https://openalex.org/W2158714788","https://openalex.org/W2159620702","https://openalex.org/W2166085889","https://openalex.org/W4205911826","https://openalex.org/W4210241463","https://openalex.org/W4235069169","https://openalex.org/W4245543257"],"related_works":["https://openalex.org/W4212827698","https://openalex.org/W2596108460","https://openalex.org/W2800842377","https://openalex.org/W2013108791","https://openalex.org/W2301668719","https://openalex.org/W2146804513","https://openalex.org/W2004759596","https://openalex.org/W1573987240","https://openalex.org/W2041624900","https://openalex.org/W4315640719"],"abstract_inverted_index":{"Gene":[0],"duplication":[1,100,140],"is":[2,87],"common":[3],"in":[4,11,136],"all":[5],"three":[6],"domains":[7],"of":[8,22,139],"life,":[9],"especially":[10],"eukaryotic":[12,45],"genomes.":[13],"The":[14,85,102,124],"duplicates":[15],"provide":[16],"new":[17],"material":[18],"for":[19,130],"the":[20,63,118,137],"action":[21],"evolutionary":[23,50,99],"forces":[24],"such":[25],"as":[26,120],"selection":[27],"or":[28,70,112,142],"genetic":[29],"drift.":[30],"Here":[31],"we":[32],"describe":[33],"a":[34],"sophisticated":[35],"procedure":[36],"to":[37,47,67],"extract":[38],"duplicated":[39],"genes":[40],"(paralogs)":[41],"from":[42,117],"26":[43],"available":[44],"genomes,":[46],"pre-calculate":[48],"several":[49],"indexes":[51],"(evolutionary":[52],"rate,":[53],"synonymous":[54],"distance/clock,":[55],"transition":[56],"redundant":[57],"exchange":[58],"clock,":[59],"etc.)":[60],"based":[61],"on":[62,96],"paralog":[64,92,103,143],"family,":[65],"and":[66,89,98,105,114,133],"identify":[68],"block":[69],"segmental":[71],"duplications":[72],"(paralogons).":[73],"We":[74],"also":[75],"constructed":[76],"an":[77],"internet-accessible":[78],"Eukaryotic":[79],"Paralog":[80],"Group":[81],"Database":[82],"(EPGD;":[83],"http://epgd.biosino.org/EPGD/).":[84],"database":[86,125],"gene-centered":[88],"organized":[90],"by":[91,110],"family.":[93],"It":[94],"focuses":[95],"paralogs":[97],"events.":[101],"families":[104],"paralogons":[106],"can":[107],"be":[108,127],"searched":[109],"text":[111,122],"sequence,":[113],"are":[115],"downloadable":[116],"website":[119],"plain":[121],"files.":[123],"will":[126],"very":[128],"useful":[129],"both":[131],"experimentalists":[132],"bioinformaticians":[134],"interested":[135],"study":[138],"events":[141],"families.":[144]},"counts_by_year":[{"year":2016,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2013,"cited_by_count":1},{"year":2012,"cited_by_count":3}],"updated_date":"2026-06-17T06:14:20.161405","created_date":"2025-10-10T00:00:00"}
