{"id":"https://openalex.org/W2007075039","doi":"https://doi.org/10.1093/nar/gkm889","title":"DDBJ with new system and face","display_name":"DDBJ with new system and face","publication_year":2007,"publication_date":"2007-10-25","ids":{"openalex":"https://openalex.org/W2007075039","doi":"https://doi.org/10.1093/nar/gkm889","mag":"2007075039","pmid":"https://pubmed.ncbi.nlm.nih.gov/17962300"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkm889","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm889","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D22/7633167/gkm889.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D22/7633167/gkm889.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5109611254","display_name":"Hideaki Sugawara","orcid":"https://orcid.org/0000-0002-7905-2481"},"institutions":[{"id":"https://openalex.org/I4210158934","display_name":"Research Organization of Information and Systems","ror":"https://ror.org/04p4e8t29","country_code":"JP","type":"facility","lineage":["https://openalex.org/I1319490839","https://openalex.org/I4210158934"]},{"id":"https://openalex.org/I47232531","display_name":"Bank of Japan","ror":"https://ror.org/04zmdqe71","country_code":"JP","type":"other","lineage":["https://openalex.org/I47232531"]},{"id":"https://openalex.org/I113198587","display_name":"National Institute of Genetics","ror":"https://ror.org/02xg1m795","country_code":"JP","type":"facility","lineage":["https://openalex.org/I113198587","https://openalex.org/I1319490839","https://openalex.org/I4210158934"]}],"countries":["JP"],"is_corresponding":true,"raw_author_name":"H. Sugawara","raw_affiliation_strings":["Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Yata, Mishima 411-8540, Japan","Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems, Yata, Mishima 411-8540, Japan","institution_ids":["https://openalex.org/I4210158934","https://openalex.org/I47232531","https://openalex.org/I113198587"]},{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5019530544","display_name":"Osamu Ogasawara","orcid":"https://orcid.org/0000-0001-6001-3397"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"O. Ogasawara","raw_affiliation_strings":["Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110262400","display_name":"K. Okubo","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"K. Okubo","raw_affiliation_strings":["Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5016213975","display_name":"Takashi Gojobori","orcid":"https://orcid.org/0000-0001-7850-1743"},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"T. Gojobori","raw_affiliation_strings":["Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan","institution_ids":[]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5015936615","display_name":"Yoshio Tateno","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"Y. Tateno","raw_affiliation_strings":["Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan"],"affiliations":[{"raw_affiliation_string":"Center for Information Biology and DNA Data Bank of Japan, National Institute of Genetics, Research Organization of Information and Systems Yata, Mishima 411-8540, Japan","institution_ids":[]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":5,"corresponding_author_ids":["https://openalex.org/A5109611254"],"corresponding_institution_ids":["https://openalex.org/I113198587","https://openalex.org/I4210158934","https://openalex.org/I47232531"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":6.3203,"has_fulltext":false,"cited_by_count":79,"citation_normalized_percentile":{"value":0.97410006,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"36","issue":"Database","first_page":"D22","last_page":"D24"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9984999895095825,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11750","display_name":"Phytoplasmas and Hemiptera pathogens","score":0.984499990940094,"subfield":{"id":"https://openalex.org/subfields/1110","display_name":"Plant Science"},"field":{"id":"https://openalex.org/fields/11","display_name":"Agricultural and Biological Sciences"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9704999923706055,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7986531257629395},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.6616857051849365},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.4656195640563965},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3868439793586731},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3608540892601013},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.279697060585022},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2250157594680786},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.21892282366752625},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.16982251405715942}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7986531257629395},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.6616857051849365},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.4656195640563965},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3868439793586731},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3608540892601013},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.279697060585022},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2250157594680786},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.21892282366752625},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.16982251405715942}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003201","descriptor_name":"Computers","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017422","descriptor_name":"Sequence Analysis, DNA","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkm889","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm889","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D22/7633167/gkm889.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17962300","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17962300","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2238829","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2238829","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkm889","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm889","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D22/7633167/gkm889.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"id":"https://metadata.un.org/sdg/17","score":0.47999998927116394,"display_name":"Partnerships for the goals"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320334764","display_name":"Japan Society for the Promotion of Science","ror":"https://ror.org/00hhkn466"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2007075039.pdf","grobid_xml":"https://content.openalex.org/works/W2007075039.grobid-xml"},"referenced_works_count":13,"referenced_works":["https://openalex.org/W1972744519","https://openalex.org/W2009219904","https://openalex.org/W2030557681","https://openalex.org/W2041984894","https://openalex.org/W2056110883","https://openalex.org/W2056564376","https://openalex.org/W2111958250","https://openalex.org/W2116554395","https://openalex.org/W2121270211","https://openalex.org/W2129842297","https://openalex.org/W2142642738","https://openalex.org/W2167307642","https://openalex.org/W2205716656"],"related_works":["https://openalex.org/W2082860237","https://openalex.org/W2119695867","https://openalex.org/W2130076355","https://openalex.org/W1990804418","https://openalex.org/W1993764875","https://openalex.org/W2046158694","https://openalex.org/W2788277189","https://openalex.org/W1971568933","https://openalex.org/W2013243191","https://openalex.org/W2117258802"],"abstract_inverted_index":{"DDBJ":[0],"(http://www.ddbj.nig.ac.jp)":[1],"collected":[2],"and":[3,33,64,75],"released":[4,25],"1":[5,10],"880":[6],"115":[7],"entries":[8],"or":[9],"134":[11],"086":[12],"245":[13],"bases":[14],"in":[15,86],"the":[16,28,79,87,90,110],"period":[17],"from":[18],"July":[19],"2006":[20],"to":[21,81],"June":[22],"2007.":[23,49,113],"The":[24],"data":[26,56],"contains":[27],"high-throughput":[29],"cDNAs":[30],"of":[31,37,89,112],"cricket":[32],"high-quality":[34],"draft":[35],"genome":[36],"medaka":[38],"among":[39],"others.":[40],"Our":[41],"computer":[42],"system":[43],"has":[44,60],"been":[45,62],"upgraded":[46],"since":[47],"March":[48],"Another":[50],"new":[51],"aspect":[52],"is":[53,69],"an":[54],"efficient":[55,107],"retrieval":[57],"tool":[58],"that":[59],"recently":[61],"equipped":[63],"served":[65],"at":[66],"DDBJ.":[67],"It":[68],"called":[70],"All-round":[71],"Retrieval":[72],"for":[73,83],"Sequence":[74,93],"Annotation,":[76],"which":[77],"enables":[78],"user":[80],"search":[82],"keywords":[84],"also":[85,99],"Feature/Qualifier":[88],"International":[91],"Nucleotide":[92],"Database":[94],"Collaboration":[95],"(http://www.insdc.org/).":[96],"We":[97],"will":[98],"replace":[100],"our":[101],"home":[102],"page":[103],"with":[104],"a":[105],"more":[106],"one":[108],"by":[109],"end":[111]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":5},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":2},{"year":2016,"cited_by_count":2},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":4},{"year":2012,"cited_by_count":5}],"updated_date":"2026-04-21T08:09:41.155169","created_date":"2025-10-10T00:00:00"}
