{"id":"https://openalex.org/W2076096957","doi":"https://doi.org/10.1093/nar/gkm370","title":"EVALLER: a web server for in silico assessment of potential protein allergenicity","display_name":"EVALLER: a web server for in silico assessment of potential protein allergenicity","publication_year":2007,"publication_date":"2007-05-08","ids":{"openalex":"https://openalex.org/W2076096957","doi":"https://doi.org/10.1093/nar/gkm370","mag":"2076096957","pmid":"https://pubmed.ncbi.nlm.nih.gov/17537818"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkm370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm370","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_2/W694/9586312/gkm370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/35/suppl_2/W694/9586312/gkm370.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5013241675","display_name":"\u00c1lvaro Mart\u00ednez Barrio","orcid":"https://orcid.org/0000-0001-5064-2093"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I2800139495","display_name":"Science for Life Laboratory","ror":"https://ror.org/04ev03g22","country_code":"SE","type":"facility","lineage":["https://openalex.org/I2800139495"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"A. M. Barrio","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I2800139495"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5012752424","display_name":"Daniel Soeria\u2010Atmadja","orcid":null},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I1342360035","display_name":"Uppsala University Hospital","ror":"https://ror.org/01apvbh93","country_code":"SE","type":"healthcare","lineage":["https://openalex.org/I1342360035"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"D. Soeria-Atmadja","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5098016435","display_name":"A. Nister","orcid":null},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I1342360035","display_name":"Uppsala University Hospital","ror":"https://ror.org/01apvbh93","country_code":"SE","type":"healthcare","lineage":["https://openalex.org/I1342360035"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"A. Nister","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5105419442","display_name":"Mats G. Gustafsson","orcid":null},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I1342360035","display_name":"Uppsala University Hospital","ror":"https://ror.org/01apvbh93","country_code":"SE","type":"healthcare","lineage":["https://openalex.org/I1342360035"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"M. G. Gustafsson","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5068191962","display_name":"Ulf Hammerling","orcid":null},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I1342360035","display_name":"Uppsala University Hospital","ror":"https://ror.org/01apvbh93","country_code":"SE","type":"healthcare","lineage":["https://openalex.org/I1342360035"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":true,"raw_author_name":"U. Hammerling","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5042185060","display_name":"Erik Bongcam\u2010Rudloff","orcid":"https://orcid.org/0000-0002-1947-8288"},"institutions":[{"id":"https://openalex.org/I123387679","display_name":"Uppsala University","ror":"https://ror.org/048a87296","country_code":"SE","type":"education","lineage":["https://openalex.org/I123387679"]},{"id":"https://openalex.org/I1342360035","display_name":"Uppsala University Hospital","ror":"https://ror.org/01apvbh93","country_code":"SE","type":"healthcare","lineage":["https://openalex.org/I1342360035"]},{"id":"https://openalex.org/I298625061","display_name":"Swedish University of Agricultural Sciences","ror":"https://ror.org/02yy8x990","country_code":"SE","type":"education","lineage":["https://openalex.org/I298625061"]}],"countries":["SE"],"is_corresponding":false,"raw_author_name":"E. Bongcam-Rudloff","raw_affiliation_strings":["Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","Swedish University of Agricultural Sciences, Uppsala, Sweden"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Linnaeus Centre for Bioinformatics, Uppsala Biomedical Centre (BMC), Uppsala University, P.O. Box 598, SE-751 24 Uppsala, Sweden, 2 Division of Toxicology, National Food Administration, P.O. Box 622, SE-751 26 Uppsala, Sweden, 3 Department of Engineering Sciences, Uppsala University, P.O. Box 534, SE-751 21 Uppsala, Sweden, 4 Department of Medical Sciences, Academical Hospital, SE-751 85 Uppsala, Sweden and 5 Department of Animal Breeding and Genetics, Swedish University of Agricultural Sciences, P.O. Box 597, SE-750 24 Uppsala, Sweden","institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035"]},{"raw_affiliation_string":"Swedish University of Agricultural Sciences, Uppsala, Sweden","institution_ids":["https://openalex.org/I298625061"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5068191962"],"corresponding_institution_ids":["https://openalex.org/I123387679","https://openalex.org/I1342360035","https://openalex.org/I298625061"],"apc_list":{"value":3992,"currency":"USD","value_usd":3992},"apc_paid":{"value":3992,"currency":"USD","value_usd":3992},"fwci":0.7012,"has_fulltext":true,"cited_by_count":41,"citation_normalized_percentile":{"value":0.67688403,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"35","issue":"Web Server","first_page":"W694","last_page":"W700"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10634","display_name":"Food Allergy and Anaphylaxis Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},"topics":[{"id":"https://openalex.org/T10634","display_name":"Food Allergy and Anaphylaxis Research","score":1.0,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10877","display_name":"Allergic Rhinitis and Sensitization","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/2723","display_name":"Immunology and Allergy"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T10051","display_name":"Asthma and respiratory diseases","score":0.9979000091552734,"subfield":{"id":"https://openalex.org/subfields/2737","display_name":"Physiology"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/in-silico","display_name":"In silico","score":0.783444881439209},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6751644015312195},{"id":"https://openalex.org/keywords/perl","display_name":"Perl","score":0.6048423051834106},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5077744126319885},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.4870739281177521},{"id":"https://openalex.org/keywords/representation","display_name":"Representation (politics)","score":0.427490770816803},{"id":"https://openalex.org/keywords/allergen","display_name":"Allergen","score":0.41200700402259827},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.4101818799972534},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3921688199043274},{"id":"https://openalex.org/keywords/immunology","display_name":"Immunology","score":0.20975124835968018},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20013141632080078},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.18537676334381104},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.14245173335075378},{"id":"https://openalex.org/keywords/allergy","display_name":"Allergy","score":0.13245230913162231}],"concepts":[{"id":"https://openalex.org/C2775905019","wikidata":"https://www.wikidata.org/wiki/Q192572","display_name":"In silico","level":3,"score":0.783444881439209},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6751644015312195},{"id":"https://openalex.org/C2777002779","wikidata":"https://www.wikidata.org/wiki/Q42478","display_name":"Perl","level":2,"score":0.6048423051834106},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5077744126319885},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.4870739281177521},{"id":"https://openalex.org/C2776359362","wikidata":"https://www.wikidata.org/wiki/Q2145286","display_name":"Representation (politics)","level":3,"score":0.427490770816803},{"id":"https://openalex.org/C2780510475","wikidata":"https://www.wikidata.org/wiki/Q186752","display_name":"Allergen","level":3,"score":0.41200700402259827},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.4101818799972534},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3921688199043274},{"id":"https://openalex.org/C203014093","wikidata":"https://www.wikidata.org/wiki/Q101929","display_name":"Immunology","level":1,"score":0.20975124835968018},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20013141632080078},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.18537676334381104},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.14245173335075378},{"id":"https://openalex.org/C207480886","wikidata":"https://www.wikidata.org/wiki/Q42982","display_name":"Allergy","level":2,"score":0.13245230913162231},{"id":"https://openalex.org/C17744445","wikidata":"https://www.wikidata.org/wiki/Q36442","display_name":"Political science","level":0,"score":0.0},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.0},{"id":"https://openalex.org/C94625758","wikidata":"https://www.wikidata.org/wiki/Q7163","display_name":"Politics","level":2,"score":0.0},{"id":"https://openalex.org/C199539241","wikidata":"https://www.wikidata.org/wiki/Q7748","display_name":"Law","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000465","descriptor_name":"Algorithms","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000485","descriptor_name":"Allergens","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000595","descriptor_name":"Amino Acid Sequence","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003429","descriptor_name":"Cross Reactions","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003429","descriptor_name":"Cross Reactions","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003429","descriptor_name":"Cross Reactions","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D003429","descriptor_name":"Cross Reactions","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008969","descriptor_name":"Molecular Sequence Data","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000276","qualifier_name":"immunology","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D019295","descriptor_name":"Computational Biology","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":"Q000379","qualifier_name":"methods","is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030562","descriptor_name":"Databases, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkm370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm370","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_2/W694/9586312/gkm370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17537818","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17537818","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":"Journal Article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1933222","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1933222","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkm370","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm370","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_2/W694/9586312/gkm370.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Quality Education","id":"https://metadata.un.org/sdg/4","score":0.8199999928474426}],"awards":[],"funders":[{"id":"https://openalex.org/F4320316497","display_name":"Insamlingsstiftelsen Cancer- och Allergifonden","ror":"https://ror.org/00z8rf270"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2076096957.pdf","grobid_xml":"https://content.openalex.org/works/W2076096957.grobid-xml"},"referenced_works_count":50,"referenced_works":["https://openalex.org/W1533152100","https://openalex.org/W1805406875","https://openalex.org/W1907490978","https://openalex.org/W1964891917","https://openalex.org/W1969359183","https://openalex.org/W1974078294","https://openalex.org/W1978013324","https://openalex.org/W1979757635","https://openalex.org/W1990621507","https://openalex.org/W1993283523","https://openalex.org/W1998298470","https://openalex.org/W2001362320","https://openalex.org/W2003918223","https://openalex.org/W2005604222","https://openalex.org/W2011807810","https://openalex.org/W2031854599","https://openalex.org/W2032226763","https://openalex.org/W2037168907","https://openalex.org/W2057051757","https://openalex.org/W2057763949","https://openalex.org/W2062578565","https://openalex.org/W2065726131","https://openalex.org/W2072004644","https://openalex.org/W2086791382","https://openalex.org/W2093509477","https://openalex.org/W2096262822","https://openalex.org/W2097901958","https://openalex.org/W2102023232","https://openalex.org/W2105352291","https://openalex.org/W2111876811","https://openalex.org/W2112874093","https://openalex.org/W2119152270","https://openalex.org/W2120948675","https://openalex.org/W2125842347","https://openalex.org/W2130614990","https://openalex.org/W2132116179","https://openalex.org/W2139091446","https://openalex.org/W2143928104","https://openalex.org/W2153544727","https://openalex.org/W2153793488","https://openalex.org/W2158313650","https://openalex.org/W2160617979","https://openalex.org/W2161851240","https://openalex.org/W2168518560","https://openalex.org/W2444462889","https://openalex.org/W2925184086","https://openalex.org/W4230256998","https://openalex.org/W4240917125","https://openalex.org/W4241352439","https://openalex.org/W6642614428"],"related_works":["https://openalex.org/W2412623563","https://openalex.org/W190299232","https://openalex.org/W1521481095","https://openalex.org/W594361471","https://openalex.org/W2604964690","https://openalex.org/W2417897055","https://openalex.org/W2613359208","https://openalex.org/W2291334382","https://openalex.org/W1485817990","https://openalex.org/W3019366399"],"abstract_inverted_index":{"Bioinformatics":[0],"testing":[1],"approaches":[2],"for":[3],"protein":[4,54],"allergenicity,":[5],"involving":[6],"amino":[7],"acid":[8],"sequence":[9],"comparisons,":[10],"have":[11],"evolved":[12],"appreciably":[13],"over":[14],"the":[15,25,95,136],"last":[16],"several":[17],"years":[18],"to":[19,104],"increased":[20],"sophistication":[21],"and":[22,59,97,128],"performance.":[23],"EVALLER,":[24],"web":[26],"server":[27,151],"presented":[28],"in":[29,49,67,112,144],"this":[30],"article":[31],"is":[32],"based":[33,39],"on":[34,40,77,99,119],"our":[35],"recently":[36],"published":[37],"'Detection":[38],"Filtered":[41],"Length-adjusted":[42],"Allergen":[43],"Peptides'":[44],"(DFLAP)":[45],"algorithm,":[46],"which":[47],"affords":[48],"silico":[50],"determination":[51],"of":[52,56,74,94,132,135],"potential":[53,81],"allergenicity":[55],"high":[57],"sensitivity":[58],"excellent":[60],"specificity.":[61],"To":[62],"strengthen":[63],"bioinformatics":[64],"risk":[65],"assessment":[66],"allergology":[68],"EVALLER":[69],"provides":[70],"a":[71,78,88,91,120],"comprehensive":[72],"outline":[73],"its":[75],"judgment":[76],"query":[79],"protein's":[80],"allergenicity.":[82],"Each":[83],"such":[84],"textual":[85],"output":[86],"incorporates":[87],"scoring":[89],"figure,":[90],"confidence":[92],"numeral":[93],"assignment":[96],"information":[98],"high-":[100],"or":[101],"low-scoring":[102],"matches":[103],"identified":[105],"allergen-related":[106],"motifs,":[107],"including":[108],"their":[109],"respective":[110],"location":[111],"accordingly":[113],"derived":[114],"allergens.":[115],"The":[116,150],"interface,":[117],"built":[118],"modified":[121],"Perl":[122],"Open":[123],"Source":[124],"package,":[125],"enables":[126],"dynamic":[127],"color-coded":[129],"graphic":[130],"representation":[131],"key":[133],"parts":[134],"output.":[137],"Moreover,":[138],"pertinent":[139],"details":[140],"can":[141,152],"be":[142,153],"examined":[143],"great":[145],"detail":[146],"through":[147],"zoomed":[148],"views.":[149],"accessed":[154],"at":[155],"http://bioinformatics.bmc.uu.se/evaller.html.":[156]},"counts_by_year":[{"year":2025,"cited_by_count":5},{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2021,"cited_by_count":4},{"year":2019,"cited_by_count":1},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":9},{"year":2014,"cited_by_count":6},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-08-21T09:56:20.448147","created_date":"2025-10-10T00:00:00"}
