{"id":"https://openalex.org/W2918103525","doi":"https://doi.org/10.1093/nar/gkm1037","title":"The Molecular Biology Database Collection: 2008 update","display_name":"The Molecular Biology Database Collection: 2008 update","publication_year":2007,"publication_date":"2007-11-19","ids":{"openalex":"https://openalex.org/W2918103525","doi":"https://doi.org/10.1093/nar/gkm1037","mag":"2918103525","pmid":"https://pubmed.ncbi.nlm.nih.gov/18025043"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkm1037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm1037","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D2/18780876/gkm1037.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D2/18780876/gkm1037.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077552473","display_name":"Michael Y. Galperin","orcid":"https://orcid.org/0000-0002-2265-5572"},"institutions":[{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]},{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"Michael Y. Galperin","raw_affiliation_strings":["National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MA 20894, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MA 20894, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5077552473"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":12.4474,"has_fulltext":true,"cited_by_count":130,"citation_normalized_percentile":{"value":0.99291257,"is_in_top_1_percent":true,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"36","issue":"suppl_1","first_page":"D2","last_page":"D4"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9955000281333923,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.994700014591217,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9932000041007996,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.7690472602844238},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7525342106819153},{"id":"https://openalex.org/keywords/nucleic-acid","display_name":"Nucleic acid","score":0.5366477370262146},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4760272800922394},{"id":"https://openalex.org/keywords/online-database","display_name":"Online database","score":0.42756780982017517},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.29156047105789185},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.2347947061061859},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.16450533270835876}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.7690472602844238},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7525342106819153},{"id":"https://openalex.org/C24107716","wikidata":"https://www.wikidata.org/wiki/Q123619","display_name":"Nucleic acid","level":2,"score":0.5366477370262146},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4760272800922394},{"id":"https://openalex.org/C2777715827","wikidata":"https://www.wikidata.org/wiki/Q7094076","display_name":"Online database","level":2,"score":0.42756780982017517},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.29156047105789185},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.2347947061061859},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.16450533270835876}],"mesh":[{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkm1037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm1037","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D2/18780876/gkm1037.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:18025043","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/18025043","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:2238887","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/2238887","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkm1037","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkm1037","pdf_url":"https://academic.oup.com/nar/article-pdf/36/suppl_1/D2/18780876/gkm1037.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2918103525.pdf","grobid_xml":"https://content.openalex.org/works/W2918103525.grobid-xml"},"referenced_works_count":36,"referenced_works":["https://openalex.org/W1503558940","https://openalex.org/W1857325778","https://openalex.org/W1965991219","https://openalex.org/W2006079840","https://openalex.org/W2011584439","https://openalex.org/W2014483037","https://openalex.org/W2016491299","https://openalex.org/W2044832480","https://openalex.org/W2051147053","https://openalex.org/W2096525273","https://openalex.org/W2097646748","https://openalex.org/W2100266992","https://openalex.org/W2105830710","https://openalex.org/W2105854065","https://openalex.org/W2108934940","https://openalex.org/W2116887824","https://openalex.org/W2130788795","https://openalex.org/W2131347449","https://openalex.org/W2139031446","https://openalex.org/W2142257318","https://openalex.org/W2148004368","https://openalex.org/W2154364831","https://openalex.org/W2155479906","https://openalex.org/W2156056868","https://openalex.org/W2159077262","https://openalex.org/W4245543257","https://openalex.org/W6630003107","https://openalex.org/W6652090255","https://openalex.org/W6654436097","https://openalex.org/W6662071483","https://openalex.org/W6663644314","https://openalex.org/W6675350327","https://openalex.org/W6680782867","https://openalex.org/W6681162484","https://openalex.org/W6682834444","https://openalex.org/W6683702713"],"related_works":["https://openalex.org/W4312158493","https://openalex.org/W2033835987","https://openalex.org/W4248750016","https://openalex.org/W4205092877","https://openalex.org/W4243839507","https://openalex.org/W1824784554","https://openalex.org/W2048912770","https://openalex.org/W2113503643","https://openalex.org/W2123887743","https://openalex.org/W1503231262"],"abstract_inverted_index":{"The":[0,55,67,87],"Nucleic":[1,24,98],"Acids":[2,25,99],"Research":[3,26,100],"online":[4,95],"Molecular":[5],"Biology":[6],"Database":[7],"Collection":[8,48],"is":[9],"a":[10,33],"public":[11],"repository":[12],"that":[13],"lists":[14],"more":[15,62,70],"than":[16,63,71],"1000":[17],"databases":[18,38,44,73,80],"described":[19,39],"in":[20,40,46],"this":[21,47],"and":[22,77,91],"previous":[23,65],"annual":[27],"database":[28,89],"issues,":[29],"as":[30,32],"well":[31],"selection":[34],"of":[35],"molecular":[36],"biology":[37],"other":[41],"journals.":[42],"All":[43],"included":[45],"are":[49,93],"freely":[50],"available":[51,94],"to":[52,69],"the":[53,64,85,97],"public.":[54],"2008":[56],"update":[57],"includes":[58],"1078":[59],"databases,":[60],"110":[61],"one.":[66],"links":[68],"80":[72],"have":[74,81],"been":[75,82],"updated":[76],"25":[78],"obsolete":[79],"removed":[83],"from":[84],"list.":[86],"complete":[88],"list":[90],"summaries":[92],"at":[96],"web":[101],"site,":[102],"http://nar.oxfordjournals.org/.":[103]},"counts_by_year":[{"year":2024,"cited_by_count":1},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":2},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":3},{"year":2012,"cited_by_count":7}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
