{"id":"https://openalex.org/W2127316014","doi":"https://doi.org/10.1093/nar/gkl992","title":"ECgene: an alternative splicing database update","display_name":"ECgene: an alternative splicing database update","publication_year":2006,"publication_date":"2006-11-28","ids":{"openalex":"https://openalex.org/W2127316014","doi":"https://doi.org/10.1093/nar/gkl992","mag":"2127316014","pmid":"https://pubmed.ncbi.nlm.nih.gov/17132829"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl992","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl992","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D99/3892045/gkl992.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D99/3892045/gkl992.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5074466949","display_name":"Y. Lee","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":true,"raw_author_name":"Y. Lee","raw_affiliation_strings":["Division of Molecular Life Sciences, Ewha Womans University, Seoul 120-750, Korea","1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"Division of Molecular Life Sciences, Ewha Womans University, Seoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]},{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5074466949","display_name":"Y. Lee","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Y. Lee","raw_affiliation_strings":["Division of Molecular Life Sciences, Ewha Womans University, Seoul 120-750, Korea","1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"Division of Molecular Life Sciences, Ewha Womans University, Seoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]},{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100735686","display_name":"Bora Kim","orcid":"https://orcid.org/0009-0000-3381-6450"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"B. Kim","raw_affiliation_strings":["1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5049845913","display_name":"Youngah Shin","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"Y. Shin","raw_affiliation_strings":["1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5078317253","display_name":"Soo Kyung Nam","orcid":"https://orcid.org/0000-0002-4372-1516"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]},{"id":"https://openalex.org/I139264467","display_name":"Seoul National University","ror":"https://ror.org/04h9pn542","country_code":"KR","type":"education","lineage":["https://openalex.org/I139264467"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Nam","raw_affiliation_strings":["1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","2Interdisciplinary Program in Bioinformatics, Seoul National UniversitySeoul 151-742, Korea"],"affiliations":[{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]},{"raw_affiliation_string":"2Interdisciplinary Program in Bioinformatics, Seoul National UniversitySeoul 151-742, Korea","institution_ids":["https://openalex.org/I139264467"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021012929","display_name":"Namshin Kim","orcid":"https://orcid.org/0000-0001-6361-274X"},"institutions":[{"id":"https://openalex.org/I142401562","display_name":"Electronics and Telecommunications Research Institute","ror":"https://ror.org/03ysstz10","country_code":"KR","type":"facility","lineage":["https://openalex.org/I142401562","https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"P. Kim","raw_affiliation_strings":["3Bioinformatics Team, Electronics and Telecommunications Research Institute (ETRI)Gajeong-Dong, Yuseong-Gu, Daejeon 305-350, Korea"],"affiliations":[{"raw_affiliation_string":"3Bioinformatics Team, Electronics and Telecommunications Research Institute (ETRI)Gajeong-Dong, Yuseong-Gu, Daejeon 305-350, Korea","institution_ids":["https://openalex.org/I142401562"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5021012929","display_name":"Namshin Kim","orcid":"https://orcid.org/0000-0001-6361-274X"},"institutions":[{"id":"https://openalex.org/I161318765","display_name":"University of California, Los Angeles","ror":"https://ror.org/046rm7j60","country_code":"US","type":"education","lineage":["https://openalex.org/I161318765"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"N. Kim","raw_affiliation_strings":["4Department of Chemistry and Biochemistry, Center for Computational Biology, Institute for Genomics and Proteomics, Molecular Biology Institute, University of California Los AngelesLos Angeles, CA 90095-1570, USA"],"affiliations":[{"raw_affiliation_string":"4Department of Chemistry and Biochemistry, Center for Computational Biology, Institute for Genomics and Proteomics, Molecular Biology Institute, University of California Los AngelesLos Angeles, CA 90095-1570, USA","institution_ids":["https://openalex.org/I161318765"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110548712","display_name":"Won\u2010Hyong Chung","orcid":"https://orcid.org/0009-0008-7534-0516"},"institutions":[{"id":"https://openalex.org/I73616290","display_name":"Korea Research Institute of Bioscience and Biotechnology","ror":"https://ror.org/03ep23f07","country_code":"KR","type":"facility","lineage":["https://openalex.org/I2801339556","https://openalex.org/I4210144908","https://openalex.org/I4387152098","https://openalex.org/I73616290"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"W.-H. Chung","raw_affiliation_strings":["5Korean Bioinformation Center, Korea Research Institute of Bioscience & Biotechnology52 Eoeun, Yuseong, Daejeon 305-333, Korea"],"affiliations":[{"raw_affiliation_string":"5Korean Bioinformation Center, Korea Research Institute of Bioscience & Biotechnology52 Eoeun, Yuseong, Daejeon 305-333, Korea","institution_ids":["https://openalex.org/I73616290"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5112429579","display_name":"J. Kim","orcid":null},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"J. Kim","raw_affiliation_strings":["1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5100375655","display_name":"Seungwon Lee","orcid":"https://orcid.org/0000-0002-1878-3766"},"institutions":[{"id":"https://openalex.org/I138925566","display_name":"Ewha Womans University","ror":"https://ror.org/053fp5c05","country_code":"KR","type":"education","lineage":["https://openalex.org/I138925566"]}],"countries":["KR"],"is_corresponding":false,"raw_author_name":"S. Lee","raw_affiliation_strings":["1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea"],"affiliations":[{"raw_affiliation_string":"1Division of Molecular Life Sciences, Ewha Womans UniversitySeoul 120-750, Korea","institution_ids":["https://openalex.org/I138925566"]}]}],"institutions":[],"countries_distinct_count":2,"institutions_distinct_count":10,"corresponding_author_ids":["https://openalex.org/A5074466949"],"corresponding_institution_ids":["https://openalex.org/I138925566"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":2.3157,"has_fulltext":true,"cited_by_count":45,"citation_normalized_percentile":{"value":0.87781836,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":90,"max":99},"biblio":{"volume":"35","issue":"Database","first_page":"D99","last_page":"D103"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9987000226974487,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10604","display_name":"RNA Research and Splicing","score":0.998199999332428,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7668467164039612},{"id":"https://openalex.org/keywords/alternative-splicing","display_name":"Alternative splicing","score":0.6773748397827148},{"id":"https://openalex.org/keywords/genbank","display_name":"GenBank","score":0.6400834918022156},{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.5607619881629944},{"id":"https://openalex.org/keywords/serial-analysis-of-gene-expression","display_name":"Serial analysis of gene expression","score":0.5569283962249756},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5115569233894348},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.4982163906097412},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.43199318647384644},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.42723360657691956},{"id":"https://openalex.org/keywords/human-genome","display_name":"Human genome","score":0.41791489720344543},{"id":"https://openalex.org/keywords/gene-expression-profiling","display_name":"Gene expression profiling","score":0.3761485815048218},{"id":"https://openalex.org/keywords/gene-expression","display_name":"Gene expression","score":0.366962730884552},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.3571424186229706},{"id":"https://openalex.org/keywords/exon","display_name":"Exon","score":0.3244297504425049},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.16055744886398315}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7668467164039612},{"id":"https://openalex.org/C194583182","wikidata":"https://www.wikidata.org/wiki/Q21114084","display_name":"Alternative splicing","level":4,"score":0.6773748397827148},{"id":"https://openalex.org/C79029880","wikidata":"https://www.wikidata.org/wiki/Q901755","display_name":"GenBank","level":3,"score":0.6400834918022156},{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.5607619881629944},{"id":"https://openalex.org/C20032557","wikidata":"https://www.wikidata.org/wiki/Q286721","display_name":"Serial analysis of gene expression","level":5,"score":0.5569283962249756},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5115569233894348},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.4982163906097412},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.43199318647384644},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.42723360657691956},{"id":"https://openalex.org/C197077220","wikidata":"https://www.wikidata.org/wiki/Q720988","display_name":"Human genome","level":4,"score":0.41791489720344543},{"id":"https://openalex.org/C18431079","wikidata":"https://www.wikidata.org/wiki/Q1502169","display_name":"Gene expression profiling","level":4,"score":0.3761485815048218},{"id":"https://openalex.org/C150194340","wikidata":"https://www.wikidata.org/wiki/Q26972","display_name":"Gene expression","level":3,"score":0.366962730884552},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.3571424186229706},{"id":"https://openalex.org/C36823959","wikidata":"https://www.wikidata.org/wiki/Q373027","display_name":"Exon","level":3,"score":0.3244297504425049},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.16055744886398315}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004285","descriptor_name":"Dogs","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D004331","descriptor_name":"Drosophila melanogaster","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D005091","descriptor_name":"Exons","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008957","descriptor_name":"Models, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012333","descriptor_name":"RNA, Messenger","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D016000","descriptor_name":"Cluster Analysis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017398","descriptor_name":"Alternative Splicing","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020033","descriptor_name":"Protein Isoforms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020224","descriptor_name":"Expressed Sequence Tags","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkl992","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl992","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D99/3892045/gkl992.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17132829","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17132829","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.628.6038","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.628.6038","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/35/suppl_1/D99.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.629.2320","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.629.2320","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2006/11/28/nar.gkl992.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2284820","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1716719","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:http://repository.kribb.re.kr:8080/:201005/7800","is_oa":false,"landing_page_url":"http://doi.org/10.1093/nar/gkl992","pdf_url":null,"source":{"id":"https://openalex.org/S4406922719","display_name":"KRIBB Repository","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"/dspace/upload/original/6909.pdf","raw_type":"Article"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl992","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl992","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D99/3892045/gkl992.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2127316014.pdf","grobid_xml":"https://content.openalex.org/works/W2127316014.grobid-xml"},"referenced_works_count":30,"referenced_works":["https://openalex.org/W1797365312","https://openalex.org/W1857325778","https://openalex.org/W1965991219","https://openalex.org/W1967618835","https://openalex.org/W1969707555","https://openalex.org/W1971278266","https://openalex.org/W1985094434","https://openalex.org/W2035341801","https://openalex.org/W2038617558","https://openalex.org/W2050209168","https://openalex.org/W2076780928","https://openalex.org/W2090335524","https://openalex.org/W2095907724","https://openalex.org/W2117526725","https://openalex.org/W2125558666","https://openalex.org/W2134208113","https://openalex.org/W2135827569","https://openalex.org/W2138814742","https://openalex.org/W2143345980","https://openalex.org/W2144800313","https://openalex.org/W2151238743","https://openalex.org/W2154954867","https://openalex.org/W2155225302","https://openalex.org/W2158679652","https://openalex.org/W2162519481","https://openalex.org/W2164395223","https://openalex.org/W2167281811","https://openalex.org/W2571404990","https://openalex.org/W2915985519","https://openalex.org/W4249877820"],"related_works":["https://openalex.org/W2168467210","https://openalex.org/W2227731780","https://openalex.org/W1977599835","https://openalex.org/W1989715828","https://openalex.org/W2061679676","https://openalex.org/W2884291362","https://openalex.org/W1974145978","https://openalex.org/W2139592023","https://openalex.org/W2009030468","https://openalex.org/W4213265720"],"abstract_inverted_index":{"ECgene":[0],"(http://genome.ewha.ac.kr/ECgene)":[1],"was":[2],"developed":[3],"to":[4,50,75,90],"provide":[5],"functional":[6,101,135,155],"annotation":[7,29],"for":[8,19,53,64,134],"alternatively":[9,158],"spliced":[10,159],"genes.":[11],"The":[12,131,161],"applications":[13,74],"encompass":[14],"the":[15,35,43,61,65,115,151,165],"genome-based":[16],"transcript":[17,152],"modeling":[18,46],"alternative":[20,177],"splicing":[21],"(AS),":[22],"domain":[23],"analysis":[24,32],"with":[25],"Gene":[26],"Ontology":[27],"(GO)":[28],"and":[30,37,47,99,111,128,136,154,176],"expression":[31,97,120,137,166,175],"based":[33,113],"on":[34,114],"EST":[36,48,56,116],"SAGE":[38,162],"data.":[39],"We":[40],"have":[41,69,139],"expanded":[42],"ECgene's":[44],"AS":[45],"clustering":[49],"nine":[51],"organisms":[52],"which":[54],"sufficient":[55],"data":[57],"are":[58],"available":[59],"in":[60],"GenBank.":[62],"As":[63],"human":[66],"genome,":[67],"we":[68],"also":[70],"introduced":[71],"several":[72],"new":[73],"analyze":[76],"differential":[77,174],"expression.":[78],"ECprofiler":[79],"is":[80,104,121,144],"an":[81,92],"ontology-based":[82],"candidate":[83],"gene":[84,96,119],"search":[85],"system":[86],"that":[87,149],"allows":[88],"users":[89],"select":[91],"arbitrary":[93],"combination":[94],"of":[95,107,157,164],"pattern":[98],"GO":[100],"categories.":[102],"DEGEST":[103],"a":[105,145],"database":[106],"differentially":[108],"expressed":[109],"genes":[110],"isoforms":[112],"information.":[117],"Importantly,":[118],"analyzed":[122],"at":[123],"three":[124],"distinctive":[125],"levels-gene,":[126],"isoform":[127],"exon":[129],"levels.":[130],"user":[132],"interfaces":[133],"analyses":[138],"been":[140],"substantially":[141],"improved.":[142],"ASviewer":[143],"dedicated":[146],"java":[147],"application":[148],"visualizes":[150],"structure":[153],"features":[156,171],"variants.":[160],"part":[163],"module":[167],"provides":[168],"many":[169],"additional":[170],"including":[172],"SNP,":[173],"tag":[178],"positions.":[179]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2017,"cited_by_count":1},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":2},{"year":2014,"cited_by_count":4},{"year":2013,"cited_by_count":7},{"year":2012,"cited_by_count":4}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}