{"id":"https://openalex.org/W2111413196","doi":"https://doi.org/10.1093/nar/gkl845","title":"OncoDB.HCC: an integrated oncogenomic database of hepatocellular carcinoma revealed aberrant cancer target genes and loci","display_name":"OncoDB.HCC: an integrated oncogenomic database of hepatocellular carcinoma revealed aberrant cancer target genes and loci","publication_year":2006,"publication_date":"2006-11-13","ids":{"openalex":"https://openalex.org/W2111413196","doi":"https://doi.org/10.1093/nar/gkl845","mag":"2111413196","pmid":"https://pubmed.ncbi.nlm.nih.gov/17098932"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl845","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl845","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D727/3841477/gkl845.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D727/3841477/gkl845.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5008783252","display_name":"Wen-Hui Su","orcid":"https://orcid.org/0000-0003-1037-4615"},"institutions":[{"id":"https://openalex.org/I4210094862","display_name":"National Defense University","ror":"https://ror.org/00hkj1v53","country_code":"TW","type":"education","lineage":["https://openalex.org/I4210094862"]},{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I68171755","display_name":"National Defense Medical Center","ror":"https://ror.org/02bn97g32","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I68171755"]}],"countries":["TW"],"is_corresponding":true,"raw_author_name":"W.-H. Su","raw_affiliation_strings":["Graduate Institute of Life Sciences, National Defense Medical Center, National Defense University, Taipei 114, Taiwan","1Graduate Institute of Life Sciences, National Defense Medical CenterNational Defense University, Taipei 114, Taiwan","5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Life Sciences, National Defense Medical Center, National Defense University, Taipei 114, Taiwan","institution_ids":["https://openalex.org/I68171755"]},{"raw_affiliation_string":"1Graduate Institute of Life Sciences, National Defense Medical CenterNational Defense University, Taipei 114, Taiwan","institution_ids":["https://openalex.org/I68171755","https://openalex.org/I4210094862"]},{"raw_affiliation_string":"5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan","institution_ids":["https://openalex.org/I4210096666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5017810039","display_name":"Chi\u2010Chao Chao","orcid":"https://orcid.org/0000-0001-6499-5789"},"institutions":[{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"C.-C. Chao","raw_affiliation_strings":["Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan","5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan","institution_ids":["https://openalex.org/I4210096666"]},{"raw_affiliation_string":"5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan","institution_ids":["https://openalex.org/I4210096666"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5110631995","display_name":"S.-H. Yeh","orcid":null},"institutions":[{"id":"https://openalex.org/I4210131804","display_name":"National Taiwan University Hospital","ror":"https://ror.org/03nteze27","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210131804"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"S.-H. Yeh","raw_affiliation_strings":["Department of Microbiology and","2Department of Microbiology, National Taiwan University HospitalTaipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Microbiology and","institution_ids":[]},{"raw_affiliation_string":"2Department of Microbiology, National Taiwan University HospitalTaipei, Taiwan","institution_ids":["https://openalex.org/I4210131804"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061524286","display_name":"Ding\u2010Shinn Chen","orcid":"https://orcid.org/0000-0001-7791-6154"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I4210131804","display_name":"National Taiwan University Hospital","ror":"https://ror.org/03nteze27","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210131804"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"D.-S. Chen","raw_affiliation_strings":["Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan and","Hepatitis Research Center, Department of Internal Medicine, National Taiwan University Hospital,","4Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan UniversityTaipei, Taiwan","3Hepatitis Research Center, Department of Internal Medicine, National Taiwan University HospitalTaipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan University, Taipei, Taiwan and","institution_ids":["https://openalex.org/I16733864"]},{"raw_affiliation_string":"Hepatitis Research Center, Department of Internal Medicine, National Taiwan University Hospital,","institution_ids":["https://openalex.org/I4210131804"]},{"raw_affiliation_string":"4Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan UniversityTaipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]},{"raw_affiliation_string":"3Hepatitis Research Center, Department of Internal Medicine, National Taiwan University HospitalTaipei, Taiwan","institution_ids":["https://openalex.org/I4210131804"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058253583","display_name":"Pei\u2010Jer Chen","orcid":"https://orcid.org/0000-0001-8316-3785"},"institutions":[{"id":"https://openalex.org/I16733864","display_name":"National Taiwan University","ror":"https://ror.org/05bqach95","country_code":"TW","type":"education","lineage":["https://openalex.org/I16733864"]},{"id":"https://openalex.org/I4210131804","display_name":"National Taiwan University Hospital","ror":"https://ror.org/03nteze27","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I4210131804"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"P.-J. Chen","raw_affiliation_strings":["Hepatitis Research Center, Department of Internal Medicine, National Taiwan University Hospital,","3Hepatitis Research Center, Department of Internal Medicine, National Taiwan University HospitalTaipei, Taiwan","4Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan UniversityTaipei, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Hepatitis Research Center, Department of Internal Medicine, National Taiwan University Hospital,","institution_ids":["https://openalex.org/I4210131804"]},{"raw_affiliation_string":"3Hepatitis Research Center, Department of Internal Medicine, National Taiwan University HospitalTaipei, Taiwan","institution_ids":["https://openalex.org/I4210131804"]},{"raw_affiliation_string":"4Graduate Institute of Clinical Medicine, College of Medicine, National Taiwan UniversityTaipei, Taiwan","institution_ids":["https://openalex.org/I16733864"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5043700334","display_name":"Yuh\u2010Shan Jou","orcid":"https://orcid.org/0000-0001-5090-3732"},"institutions":[{"id":"https://openalex.org/I4210094862","display_name":"National Defense University","ror":"https://ror.org/00hkj1v53","country_code":"TW","type":"education","lineage":["https://openalex.org/I4210094862"]},{"id":"https://openalex.org/I4210096666","display_name":"Institute of Biomedical Sciences, Academia Sinica","ror":"https://ror.org/00tk6s776","country_code":"TW","type":"facility","lineage":["https://openalex.org/I4210096666","https://openalex.org/I84653119"]},{"id":"https://openalex.org/I68171755","display_name":"National Defense Medical Center","ror":"https://ror.org/02bn97g32","country_code":"TW","type":"healthcare","lineage":["https://openalex.org/I68171755"]}],"countries":["TW"],"is_corresponding":false,"raw_author_name":"Y.-S. Jou","raw_affiliation_strings":["5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan","1Graduate Institute of Life Sciences, National Defense Medical CenterNational Defense University, Taipei 114, Taiwan"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"5Institute of Biomedical Sciences, Academia SinicaTaipei, Taiwan","institution_ids":["https://openalex.org/I4210096666"]},{"raw_affiliation_string":"1Graduate Institute of Life Sciences, National Defense Medical CenterNational Defense University, Taipei 114, Taiwan","institution_ids":["https://openalex.org/I68171755","https://openalex.org/I4210094862"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5008783252"],"corresponding_institution_ids":["https://openalex.org/I4210094862","https://openalex.org/I4210096666","https://openalex.org/I68171755"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":1.3632,"has_fulltext":true,"cited_by_count":93,"citation_normalized_percentile":{"value":0.793832,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":94,"max":99},"biblio":{"volume":"35","issue":"Database","first_page":"D727","last_page":"D731"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T11041","display_name":"Ubiquitin and proteasome pathways","score":0.9955999851226807,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11297","display_name":"Ferroptosis and cancer prognosis","score":0.9948999881744385,"subfield":{"id":"https://openalex.org/subfields/2740","display_name":"Pulmonary and Respiratory Medicine"},"field":{"id":"https://openalex.org/fields/27","display_name":"Medicine"},"domain":{"id":"https://openalex.org/domains/4","display_name":"Health Sciences"}},{"id":"https://openalex.org/T11482","display_name":"RNA modifications and cancer","score":0.9945999979972839,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.9553465843200684},{"id":"https://openalex.org/keywords/hepatocellular-carcinoma","display_name":"Hepatocellular carcinoma","score":0.7460330724716187},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.6147739291191101},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.4827936887741089},{"id":"https://openalex.org/keywords/cancer","display_name":"Cancer","score":0.443726122379303},{"id":"https://openalex.org/keywords/cancer-research","display_name":"Cancer research","score":0.33509159088134766}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.9553465843200684},{"id":"https://openalex.org/C2778019345","wikidata":"https://www.wikidata.org/wiki/Q1148337","display_name":"Hepatocellular carcinoma","level":2,"score":0.7460330724716187},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.6147739291191101},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.4827936887741089},{"id":"https://openalex.org/C121608353","wikidata":"https://www.wikidata.org/wiki/Q12078","display_name":"Cancer","level":2,"score":0.443726122379303},{"id":"https://openalex.org/C502942594","wikidata":"https://www.wikidata.org/wiki/Q3421914","display_name":"Cancer research","level":1,"score":0.33509159088134766}],"mesh":[{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D000818","descriptor_name":"Animals","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002869","descriptor_name":"Chromosome Aberrations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002869","descriptor_name":"Chromosome Aberrations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D002869","descriptor_name":"Chromosome Aberrations","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006528","descriptor_name":"Carcinoma, Hepatocellular","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D006801","descriptor_name":"Humans","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008113","descriptor_name":"Liver Neoplasms","qualifier_ui":"Q000378","qualifier_name":"metabolism","is_major_topic":false},{"descriptor_ui":"D008114","descriptor_name":"Liver Neoplasms, Experimental","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008114","descriptor_name":"Liver Neoplasms, Experimental","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D008114","descriptor_name":"Liver Neoplasms, Experimental","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D015894","descriptor_name":"Genome, Human","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D018511","descriptor_name":"Systems Integration","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020161","descriptor_name":"Physical Chromosome Mapping","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020869","descriptor_name":"Gene Expression Profiling","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D040641","descriptor_name":"Quantitative Trait Loci","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051379","descriptor_name":"Mice","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D051381","descriptor_name":"Rats","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D052138","descriptor_name":"Genes, Neoplasm","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkl845","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl845","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D727/3841477/gkl845.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17098932","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17098932","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:2284743","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1669730","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1669730","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkl845","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl845","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl845","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D727/3841477/gkl845.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"score":0.550000011920929,"display_name":"Good health and well-being","id":"https://metadata.un.org/sdg/3"}],"awards":[],"funders":[{"id":"https://openalex.org/F4320321040","display_name":"National Science Council","ror":"https://ror.org/02kv4zf79"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2111413196.pdf","grobid_xml":"https://content.openalex.org/works/W2111413196.grobid-xml"},"referenced_works_count":17,"referenced_works":["https://openalex.org/W1572687140","https://openalex.org/W1971094103","https://openalex.org/W1983099703","https://openalex.org/W1990281533","https://openalex.org/W2018938883","https://openalex.org/W2020830322","https://openalex.org/W2034269086","https://openalex.org/W2043904301","https://openalex.org/W2054857758","https://openalex.org/W2060084956","https://openalex.org/W2103637700","https://openalex.org/W2106787323","https://openalex.org/W2134064448","https://openalex.org/W2169385554","https://openalex.org/W2170957519","https://openalex.org/W2306138714","https://openalex.org/W4255483444"],"related_works":["https://openalex.org/W2417822880","https://openalex.org/W628600844","https://openalex.org/W1570838273","https://openalex.org/W2410885201","https://openalex.org/W2385390897","https://openalex.org/W3172842848","https://openalex.org/W2418745692","https://openalex.org/W2404951810","https://openalex.org/W2800415451","https://openalex.org/W2034625591"],"abstract_inverted_index":{"The":[0],"OncoDB.HCC":[1,165],"(http://oncodb.hcc.ibms.sinica.edu.tw)":[2],"is":[3],"based":[4],"on":[5],"physical":[6],"maps":[7],"of":[8,17,32,41,52,58,66,76,84,90,115,127,135,146],"rodent":[9,18,147],"and":[10,21,34,45,48,73,104,118,144,176,181,184,193],"human":[11,23,140],"genomes":[12],"containing":[13],"quantitative":[14],"trait":[15],"loci":[16,137,157,177],"HCC":[19,24,54,59,94,116,125,130,136,148,153,169,174,191],"models":[20,149],"various":[22],"somatic":[25,80],"aberrations":[26,81],"including":[27],"chromosomal":[28,142],"data":[29,51,62,67,170],"from":[30,43,69,82],"loss":[31],"heterozygosity":[33],"comparative":[35],"genome":[36],"hybridization":[37],"analyses,":[38],"altered":[39,98],"expression":[40,121],"genes":[42,95,175],"microarray":[44,131],"proteomic":[46],"studies,":[47,183],"finally":[49],"experimental":[50],"published":[53],"genes.":[55],"Comprehensive":[56],"integration":[57],"genomic":[60,71],"aberration":[61],"avoids":[63],"potential":[64,186],"pitfalls":[65],"inconsistency":[68],"single":[70],"approach":[72],"provides":[74],"lines":[75],"evidence":[77],"to":[78,87,161],"reveal":[79],"levels":[83],"DNA,":[85],"RNA":[86],"protein.":[88],"Twenty-nine":[89],"30":[91],"(96.7%)":[92],"novel":[93],"with":[96,155],"significant":[97],"expressions":[99],"in":[100,112,123,138],"compared":[101],"between":[102,139],"tumor":[103],"adjacent":[105],"normal":[106],"tissues":[107,117],"were":[108],"validated":[109],"by":[110,119],"RT-PCR":[111],"45":[113],"pairs":[114],"matching":[120],"profiles":[122],"57":[124],"patients":[126],"re-analyzed":[128],"Stanford":[129],"data.":[132],"Comparative":[133],"mapping":[134],"aberrant":[141],"regions":[143,154],"QTLs":[145],"revealed":[150],"12":[151],"syntenic":[152],"2":[156,162],"effectively":[158],"narrowed":[159],"down":[160],"Mb.":[163],"Together,":[164],"graphically":[166],"presents":[167],"comprehensive":[168],"integration,":[171],"reveals":[172],"important":[173],"for":[178,189],"positional":[179],"cloning":[180],"functional":[182],"discloses":[185],"molecular":[187],"targets":[188],"improving":[190],"diagnosis":[192],"therapy.":[194]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2025,"cited_by_count":6},{"year":2024,"cited_by_count":4},{"year":2023,"cited_by_count":4},{"year":2022,"cited_by_count":4},{"year":2021,"cited_by_count":2},{"year":2020,"cited_by_count":8},{"year":2019,"cited_by_count":3},{"year":2018,"cited_by_count":5},{"year":2017,"cited_by_count":2},{"year":2016,"cited_by_count":4},{"year":2015,"cited_by_count":5},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":9},{"year":2012,"cited_by_count":7}],"updated_date":"2026-05-07T13:39:58.223016","created_date":"2025-10-10T00:00:00"}
