{"id":"https://openalex.org/W2047590148","doi":"https://doi.org/10.1093/nar/gkl648","title":"SGDB: a database of synthetic genes re-designed for optimizing protein over-expression","display_name":"SGDB: a database of synthetic genes re-designed for optimizing protein over-expression","publication_year":2006,"publication_date":"2006-10-24","ids":{"openalex":"https://openalex.org/W2047590148","doi":"https://doi.org/10.1093/nar/gkl648","mag":"2047590148","pmid":"https://pubmed.ncbi.nlm.nih.gov/17062619"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl648","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl648","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D76/3801557/gkl648.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","datacite","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D76/3801557/gkl648.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5030319840","display_name":"Gang Wu","orcid":"https://orcid.org/0000-0002-1678-5864"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"G. Wu","raw_affiliation_strings":["Department of Biological Sciences, University of Maryland at Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Biological Sciences, University of Maryland at Baltimore County, 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5061628897","display_name":"Yao Zheng","orcid":"https://orcid.org/0000-0003-2126-2897"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"Y. Zheng","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011709863","display_name":"Irfan Qureshi","orcid":"https://orcid.org/0000-0002-0572-0993"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"I. Qureshi","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5088087472","display_name":"Hyeon-Cheol Zin","orcid":null},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"H. T. Zin","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5011391078","display_name":"T. Beck","orcid":"https://orcid.org/0000-0002-7373-0640"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"T. Beck","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5081788414","display_name":"Blazej Bulka","orcid":null},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":false,"raw_author_name":"B. Bulka","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","Department of Computer Sciences, University of Maryland at Baltimore County1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]},{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5101451310","display_name":"Stephen J. Freeland","orcid":"https://orcid.org/0000-0003-4606-7617"},"institutions":[{"id":"https://openalex.org/I79272384","display_name":"University of Maryland, Baltimore County","ror":"https://ror.org/02qskvh78","country_code":"US","type":"education","lineage":["https://openalex.org/I79272384"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"S. J. Freeland","raw_affiliation_strings":["Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA"],"raw_orcid":null,"affiliations":[{"raw_affiliation_string":"Department of Computer Sciences, University of Maryland at Baltimore County 1000 Hilltop Circle, Baltimore, MD 21229, USA","institution_ids":["https://openalex.org/I79272384"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5101451310"],"corresponding_institution_ids":["https://openalex.org/I79272384"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.7629,"has_fulltext":true,"cited_by_count":41,"citation_normalized_percentile":{"value":0.68246707,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":98},"biblio":{"volume":"35","issue":"Database","first_page":"D76","last_page":"D79"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9980999827384949,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10932","display_name":"Microbial Metabolic Engineering and Bioproduction","score":0.9976000189781189,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10887","display_name":"Bioinformatics and Genomic Networks","score":0.995199978351593,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.6631346344947815},{"id":"https://openalex.org/keywords/xml","display_name":"XML","score":0.5603435635566711},{"id":"https://openalex.org/keywords/relational-database","display_name":"Relational database","score":0.5449300408363342},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.5325324535369873},{"id":"https://openalex.org/keywords/database-schema","display_name":"Database schema","score":0.48450395464897156},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.48389753699302673},{"id":"https://openalex.org/keywords/schema","display_name":"Schema (genetic algorithms)","score":0.4718318581581116},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4702029824256897},{"id":"https://openalex.org/keywords/information-retrieval","display_name":"Information retrieval","score":0.3667868673801422},{"id":"https://openalex.org/keywords/database-design","display_name":"Database design","score":0.3408525586128235},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.29234468936920166},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.20666849613189697}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.6631346344947815},{"id":"https://openalex.org/C8797682","wikidata":"https://www.wikidata.org/wiki/Q2115","display_name":"XML","level":2,"score":0.5603435635566711},{"id":"https://openalex.org/C5655090","wikidata":"https://www.wikidata.org/wiki/Q192588","display_name":"Relational database","level":2,"score":0.5449300408363342},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.5325324535369873},{"id":"https://openalex.org/C30775581","wikidata":"https://www.wikidata.org/wiki/Q632285","display_name":"Database schema","level":3,"score":0.48450395464897156},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.48389753699302673},{"id":"https://openalex.org/C52146309","wikidata":"https://www.wikidata.org/wiki/Q7431116","display_name":"Schema (genetic algorithms)","level":2,"score":0.4718318581581116},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4702029824256897},{"id":"https://openalex.org/C23123220","wikidata":"https://www.wikidata.org/wiki/Q816826","display_name":"Information retrieval","level":1,"score":0.3667868673801422},{"id":"https://openalex.org/C148840519","wikidata":"https://www.wikidata.org/wiki/Q1049878","display_name":"Database design","level":2,"score":0.3408525586128235},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.29234468936920166},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.20666849613189697}],"mesh":[{"descriptor_ui":"D005813","descriptor_name":"Genes, Synthetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005813","descriptor_name":"Genes, Synthetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D005813","descriptor_name":"Genes, Synthetic","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014176","descriptor_name":"Protein Biosynthesis","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030561","descriptor_name":"Databases, Nucleic Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true}],"locations_count":6,"locations":[{"id":"doi:10.1093/nar/gkl648","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl648","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D76/3801557/gkl648.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17062619","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17062619","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:414343","is_oa":true,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1781117","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1781117","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkl648","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":true,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"acceptedVersion","is_accepted":true,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"},{"id":"pmh:oai:mdsoar.org:11603/28739","is_oa":true,"landing_page_url":"http://hdl.handle.net/11603/28739","pdf_url":"https://mdsoar.org/bitstreams/2d20806e-95dd-490f-b62b-8cd911a05e3c/download","source":{"id":"https://openalex.org/S4306402556","display_name":"Maryland Shared Open Access Repository (USMAI Consortium)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"doi:10.13016/m2k7ba-5bcq","is_oa":true,"landing_page_url":"https://doi.org/10.13016/m2k7ba-5bcq","pdf_url":null,"source":{"id":"https://openalex.org/S4306402644","display_name":"Digital Repository at the University of Maryland (University of Maryland College Park)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I66946132","host_organization_name":"University of Maryland, College Park","host_organization_lineage":["https://openalex.org/I66946132"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":null,"is_accepted":false,"is_published":null,"raw_source_name":null,"raw_type":"Collection"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl648","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl648","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D76/3801557/gkl648.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G7793358065","display_name":"Developing an Integrated Toolkit to Explore Code/Genome Interaction","funder_award_id":"0317349","funder_id":"https://openalex.org/F4320306076","funder_display_name":"National Science Foundation"}],"funders":[{"id":"https://openalex.org/F4320306076","display_name":"National Science Foundation","ror":"https://ror.org/021nxhr62"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2047590148.pdf","grobid_xml":"https://content.openalex.org/works/W2047590148.grobid-xml"},"referenced_works_count":23,"referenced_works":["https://openalex.org/W1966252059","https://openalex.org/W1977550154","https://openalex.org/W1981078760","https://openalex.org/W1991441002","https://openalex.org/W2004674004","https://openalex.org/W2011205484","https://openalex.org/W2015192661","https://openalex.org/W2018590530","https://openalex.org/W2032199144","https://openalex.org/W2038435477","https://openalex.org/W2039707307","https://openalex.org/W2072499238","https://openalex.org/W2074231493","https://openalex.org/W2094409918","https://openalex.org/W2094463988","https://openalex.org/W2099763917","https://openalex.org/W2125076649","https://openalex.org/W2148104522","https://openalex.org/W2155441992","https://openalex.org/W2163261777","https://openalex.org/W2164618276","https://openalex.org/W2168036974","https://openalex.org/W2267022988"],"related_works":["https://openalex.org/W2153455914","https://openalex.org/W325713583","https://openalex.org/W1501673548","https://openalex.org/W1905261690","https://openalex.org/W2591891926","https://openalex.org/W2483382562","https://openalex.org/W2512945146","https://openalex.org/W2460926837","https://openalex.org/W2000469556","https://openalex.org/W2079588361"],"abstract_inverted_index":{"Here":[0],"we":[1],"present":[2],"the":[3,32,75,107,124],"Synthetic":[4],"Gene":[5],"Database":[6],"(SGDB):":[7],"a":[8,63,128],"relational":[9],"database":[10,33,88,108],"that":[11,56,78],"houses":[12],"sequences":[13,126],"and":[14,131,142,146],"associated":[15,151],"experimental":[16],"information":[17,35,115,148],"on":[18,149],"synthetic":[19,102,129],"(artificially":[20],"engineered)":[21],"genes":[22,55],"from":[23,36],"all":[24,114],"peer-reviewed":[25],"studies":[26],"published":[27,40],"to":[28,49,71],"date.":[29],"At":[30],"present,":[31],"comprises":[34],"more":[37],"than":[38],"200":[39],"experiments.":[41],"This":[42],"resource":[43],"not":[44],"only":[45],"provides":[46],"reference":[47],"material":[48],"guide":[50],"experimentalists":[51],"in":[52],"designing":[53],"new":[54],"improve":[57],"protein":[58],"expression,":[59],"but":[60],"also":[61,92],"offers":[62],"dataset":[64],"for":[65,97],"analysis":[66],"by":[67],"bioinformaticians":[68],"who":[69],"seek":[70],"test":[72],"ideas":[73],"regarding":[74],"underlying":[76],"factors":[77],"influence":[79],"gene":[80,130],"expression.":[81],"The":[82],"SGDB":[83],"was":[84],"built":[85],"under":[86],"MySQL":[87],"management":[89],"system.":[90],"We":[91],"offer":[93],"an":[94,136,150],"XML":[95,117],"schema":[96],"standardized":[98],"data":[99],"description":[100],"of":[101,127],"genes.":[103],"Users":[104],"can":[105],"access":[106],"at":[109,140,153],"http://www.evolvingcode.net/codon/sgdb/index.php,":[110],"or":[111],"batch":[112],"downloads":[113],"through":[116],"files.":[118],"Moreover,":[119],"users":[120],"may":[121],"visually":[122],"compare":[123],"coding":[125],"its":[132],"natural":[133],"counterpart":[134],"with":[135],"integrated":[137],"web":[138],"tool":[139],"http://www.evolvingcode.net/codon/sgdb/aligner.php,":[141],"discuss":[143],"questions,":[144],"findings":[145],"related":[147],"e-forum":[152],"http://www.evolvingcode.net/forum/viewforum.php?f=27.":[154]},"counts_by_year":[{"year":2025,"cited_by_count":3},{"year":2023,"cited_by_count":3},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":3},{"year":2020,"cited_by_count":1},{"year":2019,"cited_by_count":5},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":5},{"year":2015,"cited_by_count":3},{"year":2014,"cited_by_count":3},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-07-29T09:40:50.615796","created_date":"2025-10-10T00:00:00"}