{"id":"https://openalex.org/W2107326055","doi":"https://doi.org/10.1093/nar/gkl292","title":"Protein Peeling 2: a web server to convert protein structures into series of protein units","display_name":"Protein Peeling 2: a web server to convert protein structures into series of protein units","publication_year":2006,"publication_date":"2006-07-01","ids":{"openalex":"https://openalex.org/W2107326055","doi":"https://doi.org/10.1093/nar/gkl292","mag":"2107326055","pmid":"https://pubmed.ncbi.nlm.nih.gov/16845113"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl292","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl292","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W75/7623603/gkl292.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W75/7623603/gkl292.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5060243916","display_name":"Jean\u2010Christophe Gelly","orcid":"https://orcid.org/0000-0001-5138-361X"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I4210107423","display_name":"Institut de Biologie Physico-Chimique","ror":"https://ror.org/01na0pb61","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210107423"]}],"countries":["FR"],"is_corresponding":true,"raw_author_name":"J.-C. Gelly","raw_affiliation_strings":["CNRS, UPR 9080, Laboratoire de Biochimie Th\u00e9orique, Institut de Biologie, Physico-Chimique (FRC 550) 11, rue Pierre et Marie Curie, 75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"CNRS, UPR 9080, Laboratoire de Biochimie Th\u00e9orique, Institut de Biologie, Physico-Chimique (FRC 550) 11, rue Pierre et Marie Curie, 75005 Paris, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210107423"]}]},{"author_position":"middle","author":{"id":null,"display_name":"C. Etchebest","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"C. Etchebest","raw_affiliation_strings":["INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France"],"affiliations":[{"raw_affiliation_string":"INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210113863"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5058605559","display_name":"S. Hazout","orcid":null},"institutions":[{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"S. Hazout","raw_affiliation_strings":["INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France"],"affiliations":[{"raw_affiliation_string":"INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210113863"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5024376929","display_name":"Alexandre G. de Brevern","orcid":"https://orcid.org/0000-0001-7112-5626"},"institutions":[{"id":"https://openalex.org/I1294671590","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73","country_code":"FR","type":"government","lineage":["https://openalex.org/I1294671590"]},{"id":"https://openalex.org/I154526488","display_name":"Inserm","ror":"https://ror.org/02vjkv261","country_code":"FR","type":"government","lineage":["https://openalex.org/I154526488"]},{"id":"https://openalex.org/I204730241","display_name":"Universit\u00e9 Paris Cit\u00e9","ror":"https://ror.org/05f82e368","country_code":"FR","type":"education","lineage":["https://openalex.org/I204730241"]},{"id":"https://openalex.org/I3017942884","display_name":"Institut de Math\u00e9matiques de Jussieu-Paris Rive Gauche","ror":"https://ror.org/03fk87k11","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I1294671590","https://openalex.org/I204730241","https://openalex.org/I3017942884","https://openalex.org/I39804081","https://openalex.org/I4210141950"]},{"id":"https://openalex.org/I4210094115","display_name":"Laboratoire d'Informatique Algorithmique: Fondements et Applications","ror":"https://ror.org/00pbqgm18","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I204730241","https://openalex.org/I4210094115","https://openalex.org/I4210159245"]},{"id":"https://openalex.org/I4210107423","display_name":"Institut de Biologie Physico-Chimique","ror":"https://ror.org/01na0pb61","country_code":"FR","type":"facility","lineage":["https://openalex.org/I1294671590","https://openalex.org/I4210096427","https://openalex.org/I4210107423"]},{"id":"https://openalex.org/I4210113863","display_name":"G\u00e9nomique Bioinformatique et Applications","ror":"https://ror.org/0264vhs54","country_code":"FR","type":"facility","lineage":["https://openalex.org/I124158823","https://openalex.org/I4210113863","https://openalex.org/I4210134562"]}],"countries":["FR"],"is_corresponding":false,"raw_author_name":"A.G. de Brevern","raw_affiliation_strings":["INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","Equipe de Bioinformatique G\u00e9nomique et Mol\u00e9culaire (EBGM), INSERM, U726, Universit\u00e9 Denis DIDEROT -Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","Universit\u00e9 Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","INSERM, U726, Equipe de Bioinformatique G\u00e9nomique et Mol\u00e9culaire (EBGM) ;","CNRS, UPR 9080, Laboratoire de Biochimie Th\u00e9orique, Institut de Biologie Physico -Chimique (FRC 550), 11, rue Pierre et Marie Curie, 75005 Paris, France"],"affiliations":[{"raw_affiliation_string":"INSERM, U726, Equipe de Bioinformatique Ge nomique et Mole culaire (EBGM), Universite Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241","https://openalex.org/I4210113863"]},{"raw_affiliation_string":"Equipe de Bioinformatique G\u00e9nomique et Mol\u00e9culaire (EBGM), INSERM, U726, Universit\u00e9 Denis DIDEROT -Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","institution_ids":["https://openalex.org/I154526488","https://openalex.org/I204730241"]},{"raw_affiliation_string":"Universit\u00e9 Paris 7, case 7113, 2, place Jussieu, 75251 Paris Cedex 05, France","institution_ids":["https://openalex.org/I204730241","https://openalex.org/I4210094115","https://openalex.org/I3017942884"]},{"raw_affiliation_string":"INSERM, U726, Equipe de Bioinformatique G\u00e9nomique et Mol\u00e9culaire (EBGM) ;","institution_ids":["https://openalex.org/I4210113863","https://openalex.org/I154526488"]},{"raw_affiliation_string":"CNRS, UPR 9080, Laboratoire de Biochimie Th\u00e9orique, Institut de Biologie Physico -Chimique (FRC 550), 11, rue Pierre et Marie Curie, 75005 Paris, France","institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210107423"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":4,"corresponding_author_ids":["https://openalex.org/A5060243916"],"corresponding_institution_ids":["https://openalex.org/I1294671590","https://openalex.org/I4210107423"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.6811,"has_fulltext":true,"cited_by_count":23,"citation_normalized_percentile":{"value":0.6843186,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"34","issue":"Web Server","first_page":"W75","last_page":"W78"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9995999932289124,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T11162","display_name":"Enzyme Structure and Function","score":0.9973000288009644,"subfield":{"id":"https://openalex.org/subfields/2505","display_name":"Materials Chemistry"},"field":{"id":"https://openalex.org/fields/25","display_name":"Materials Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9943000078201294,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.7642639875411987},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7348013520240784},{"id":"https://openalex.org/keywords/protein-structure","display_name":"Protein structure","score":0.572979211807251},{"id":"https://openalex.org/keywords/protein-data-bank","display_name":"Protein Data Bank","score":0.5147976279258728},{"id":"https://openalex.org/keywords/index","display_name":"Index (typography)","score":0.4683228135108948},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.3646611273288727},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.35413986444473267},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.1856936812400818},{"id":"https://openalex.org/keywords/biochemistry","display_name":"Biochemistry","score":0.14956170320510864},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.12386399507522583},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.11092296242713928}],"concepts":[{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.7642639875411987},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7348013520240784},{"id":"https://openalex.org/C47701112","wikidata":"https://www.wikidata.org/wiki/Q735188","display_name":"Protein structure","level":2,"score":0.572979211807251},{"id":"https://openalex.org/C119145174","wikidata":"https://www.wikidata.org/wiki/Q7251429","display_name":"Protein Data Bank","level":3,"score":0.5147976279258728},{"id":"https://openalex.org/C2777382242","wikidata":"https://www.wikidata.org/wiki/Q6017816","display_name":"Index (typography)","level":2,"score":0.4683228135108948},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.3646611273288727},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.35413986444473267},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.1856936812400818},{"id":"https://openalex.org/C55493867","wikidata":"https://www.wikidata.org/wiki/Q7094","display_name":"Biochemistry","level":1,"score":0.14956170320510864},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.12386399507522583},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.11092296242713928}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011487","descriptor_name":"Protein Conformation","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000737","qualifier_name":"chemistry","is_major_topic":false},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D017510","descriptor_name":"Protein Folding","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":5,"locations":[{"id":"doi:10.1093/nar/gkl292","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl292","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W75/7623603/gkl292.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:16845113","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16845113","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:HAL:inserm-00133731v1","is_oa":true,"landing_page_url":"https://inserm.hal.science/inserm-00133731","pdf_url":null,"source":{"id":"https://openalex.org/S4306402512","display_name":"HAL (Le Centre pour la Communication Scientifique Directe)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1294671590","host_organization_name":"Centre National de la Recherche Scientifique","host_organization_lineage":["https://openalex.org/I1294671590"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Research, 2006, 34 (Web Server issue), pp.W75-8. &#x27E8;10.1093/nar/gkl292&#x27E9;","raw_type":"Journal articles"},{"id":"pmh:oai:europepmc.org:338448","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1538916","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1538916","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkl292","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl292","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl292","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W75/7623603/gkl292.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[{"id":"https://openalex.org/G5640121800","display_name":null,"funder_award_id":"(CNRS)","funder_id":"https://openalex.org/F4320322892","funder_display_name":"Centre National de la Recherche Scientifique"},{"id":"https://openalex.org/G7758152977","display_name":null,"funder_award_id":"support","funder_id":"https://openalex.org/F4320322892","funder_display_name":"Centre National de la Recherche Scientifique"},{"id":"https://openalex.org/G97595544","display_name":null,"funder_award_id":"(INSERM)","funder_id":"https://openalex.org/F4320320893","funder_display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale"}],"funders":[{"id":"https://openalex.org/F4320320893","display_name":"Institut National de la Sant\u00e9 et de la Recherche M\u00e9dicale","ror":"https://ror.org/02vjkv261"},{"id":"https://openalex.org/F4320322892","display_name":"Centre National de la Recherche Scientifique","ror":"https://ror.org/02feahw73"}],"has_content":{"grobid_xml":true,"pdf":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2107326055.pdf","grobid_xml":"https://content.openalex.org/works/W2107326055.grobid-xml"},"referenced_works_count":33,"referenced_works":["https://openalex.org/W255996521","https://openalex.org/W1969761972","https://openalex.org/W1973181401","https://openalex.org/W1975736414","https://openalex.org/W1976499789","https://openalex.org/W1983836796","https://openalex.org/W1989816430","https://openalex.org/W1991383804","https://openalex.org/W1998616079","https://openalex.org/W1999473806","https://openalex.org/W2026258231","https://openalex.org/W2050152906","https://openalex.org/W2055118532","https://openalex.org/W2063034490","https://openalex.org/W2078051636","https://openalex.org/W2081088279","https://openalex.org/W2092598726","https://openalex.org/W2095179527","https://openalex.org/W2097775420","https://openalex.org/W2100981947","https://openalex.org/W2101298197","https://openalex.org/W2101392123","https://openalex.org/W2113403117","https://openalex.org/W2128983184","https://openalex.org/W2130479394","https://openalex.org/W2138116388","https://openalex.org/W2151835253","https://openalex.org/W2153153865","https://openalex.org/W2170612635","https://openalex.org/W2177861138","https://openalex.org/W2290019866","https://openalex.org/W4229880569","https://openalex.org/W4252878612"],"related_works":["https://openalex.org/W2058809752","https://openalex.org/W2572080171","https://openalex.org/W2013211627","https://openalex.org/W4280624450","https://openalex.org/W3126783617","https://openalex.org/W2615841538","https://openalex.org/W3093468851","https://openalex.org/W2121688928","https://openalex.org/W3040256181","https://openalex.org/W2145118195"],"abstract_inverted_index":{"Protein":[0],"Peeling":[1],"2":[2],"(PP2)":[3],"is":[4,39],"a":[5,21,40],"web":[6],"server":[7,94],"for":[8],"the":[9,17,48,56,64,75],"automatic":[10],"identification":[11],"of":[12,20,28,50,58,78],"protein":[13,29,33,51,59,65],"units":[14],"(PUs)":[15],"given":[16,83],"3D":[18],"coordinates":[19],"protein.":[22],"PUs":[23],"are":[24,82],"an":[25],"intermediate":[26],"level":[27],"structure":[30],"description":[31],"between":[32],"domains":[34],"and":[35,46,62,86,90],"secondary":[36],"structures.":[37,52],"It":[38],"new":[41],"tool":[42],"to":[43],"better":[44],"understand":[45],"analyze":[47],"organization":[49],"PP2":[53],"uses":[54],"only":[55],"matrices":[57],"contact":[60],"probabilities":[61],"cuts":[63],"structures":[66],"optimally":[67],"using":[68,88],"Matthews'":[69],"coefficient":[70],"correlation.":[71],"An":[72],"index":[73],"assesses":[74],"compactness":[76],"quality":[77],"each":[79],"PU.":[80],"Results":[81],"both":[84],"textually":[85],"graphically":[87],"JMol":[89],"PyMol":[91],"softwares.":[92],"The":[93],"can":[95],"be":[96],"accessed":[97],"from":[98],"http://www.ebgm.jussieu.fr/~gelly/index.html.":[99]},"counts_by_year":[{"year":2025,"cited_by_count":2},{"year":2023,"cited_by_count":1},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2020,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":2}],"updated_date":"2026-04-10T15:06:20.359241","created_date":"2025-10-10T00:00:00"}
