{"id":"https://openalex.org/W2154268145","doi":"https://doi.org/10.1093/nar/gkl157","title":"Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains","display_name":"Cascade PSI-BLAST web server: a remote homology search tool for relating protein domains","publication_year":2006,"publication_date":"2006-07-01","ids":{"openalex":"https://openalex.org/W2154268145","doi":"https://doi.org/10.1093/nar/gkl157","mag":"2154268145","pmid":"https://pubmed.ncbi.nlm.nih.gov/16844978"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl157","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl157","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W143/7622845/gkl157.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W143/7622845/gkl157.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5113555547","display_name":"R K Bhadra","orcid":null},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":true,"raw_author_name":"R. Bhadra","raw_affiliation_strings":["Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India","Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and"],"affiliations":[{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5100695289","display_name":"Sankaran Sandhya","orcid":"https://orcid.org/0000-0003-0055-302X"},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]},{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"S. Sandhya","raw_affiliation_strings":["Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and","National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India"],"affiliations":[{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and","institution_ids":["https://openalex.org/I59270414"]},{"raw_affiliation_string":"National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045895285","display_name":"K. R. Abhinandan","orcid":null},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"K. R. Abhinandan","raw_affiliation_strings":["Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and"],"affiliations":[{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and","institution_ids":["https://openalex.org/I59270414"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5090654138","display_name":"Shaon Chakrabarti","orcid":"https://orcid.org/0000-0002-7429-5927"},"institutions":[{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"S. Chakrabarti","raw_affiliation_strings":["National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India"],"affiliations":[{"raw_affiliation_string":"National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5076779054","display_name":"Ramanathan Sowdhamini","orcid":"https://orcid.org/0000-0002-6642-2367"},"institutions":[{"id":"https://openalex.org/I11947397","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27","country_code":"IN","type":"education","lineage":["https://openalex.org/I11947397","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]},{"id":"https://openalex.org/I194223965","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76","country_code":"IN","type":"facility","lineage":["https://openalex.org/I11947397","https://openalex.org/I194223965","https://openalex.org/I2799351866","https://openalex.org/I3149292468"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"R. Sowdhamini","raw_affiliation_strings":["National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India"],"affiliations":[{"raw_affiliation_string":"National Center for Biological Sciences, Tata Institute of Fundamental Research, GKVK Campus, Bellary Road, Bangalore 560 065, India","institution_ids":["https://openalex.org/I194223965","https://openalex.org/I11947397"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5076920718","display_name":"Narayanaswamy Srinivasan","orcid":"https://orcid.org/0000-0002-6566-6239"},"institutions":[{"id":"https://openalex.org/I59270414","display_name":"Indian Institute of Science Bangalore","ror":"https://ror.org/04dese585","country_code":"IN","type":"education","lineage":["https://openalex.org/I59270414"]}],"countries":["IN"],"is_corresponding":false,"raw_author_name":"N. Srinivasan","raw_affiliation_strings":["Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and"],"affiliations":[{"raw_affiliation_string":"Molecular Biophysics Unit, Indian Institute of Science, 560 012, Bangalore, India and","institution_ids":["https://openalex.org/I59270414"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":6,"corresponding_author_ids":["https://openalex.org/A5113555547"],"corresponding_institution_ids":["https://openalex.org/I59270414"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":0.2709,"has_fulltext":true,"cited_by_count":17,"citation_normalized_percentile":{"value":0.58689998,"is_in_top_1_percent":false,"is_in_top_10_percent":false},"cited_by_percentile_year":{"min":89,"max":99},"biblio":{"volume":"34","issue":"Web Server","first_page":"W143","last_page":"W146"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.9973999857902527,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10044","display_name":"Protein Structure and Dynamics","score":0.9968000054359436,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.7909889221191406},{"id":"https://openalex.org/keywords/sequence-homology","display_name":"Sequence homology","score":0.7023068070411682},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.6473985910415649},{"id":"https://openalex.org/keywords/homology","display_name":"Homology (biology)","score":0.6099961400032043},{"id":"https://openalex.org/keywords/computational-biology","display_name":"Computational biology","score":0.5698704123497009},{"id":"https://openalex.org/keywords/cascade","display_name":"Cascade","score":0.5175070762634277},{"id":"https://openalex.org/keywords/sequence-alignment","display_name":"Sequence alignment","score":0.505169689655304},{"id":"https://openalex.org/keywords/sequence-database","display_name":"Sequence database","score":0.4415700137615204},{"id":"https://openalex.org/keywords/sequence","display_name":"Sequence (biology)","score":0.43340128660202026},{"id":"https://openalex.org/keywords/multiple-sequence-alignment","display_name":"Multiple sequence alignment","score":0.4239943325519562},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.37206482887268066},{"id":"https://openalex.org/keywords/peptide-sequence","display_name":"Peptide sequence","score":0.3240051865577698},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.3197091817855835},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.17984724044799805},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.1616511046886444},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.14454051852226257}],"concepts":[{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.7909889221191406},{"id":"https://openalex.org/C2779315201","wikidata":"https://www.wikidata.org/wiki/Q414601","display_name":"Sequence homology","level":4,"score":0.7023068070411682},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.6473985910415649},{"id":"https://openalex.org/C165525559","wikidata":"https://www.wikidata.org/wiki/Q224180","display_name":"Homology (biology)","level":3,"score":0.6099961400032043},{"id":"https://openalex.org/C70721500","wikidata":"https://www.wikidata.org/wiki/Q177005","display_name":"Computational biology","level":1,"score":0.5698704123497009},{"id":"https://openalex.org/C34146451","wikidata":"https://www.wikidata.org/wiki/Q5048094","display_name":"Cascade","level":2,"score":0.5175070762634277},{"id":"https://openalex.org/C45484198","wikidata":"https://www.wikidata.org/wiki/Q827246","display_name":"Sequence alignment","level":4,"score":0.505169689655304},{"id":"https://openalex.org/C41584329","wikidata":"https://www.wikidata.org/wiki/Q175902","display_name":"Sequence database","level":3,"score":0.4415700137615204},{"id":"https://openalex.org/C2778112365","wikidata":"https://www.wikidata.org/wiki/Q3511065","display_name":"Sequence (biology)","level":2,"score":0.43340128660202026},{"id":"https://openalex.org/C88031987","wikidata":"https://www.wikidata.org/wiki/Q1377767","display_name":"Multiple sequence alignment","level":5,"score":0.4239943325519562},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.37206482887268066},{"id":"https://openalex.org/C167625842","wikidata":"https://www.wikidata.org/wiki/Q899763","display_name":"Peptide sequence","level":3,"score":0.3240051865577698},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.3197091817855835},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.17984724044799805},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.1616511046886444},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.14454051852226257},{"id":"https://openalex.org/C43617362","wikidata":"https://www.wikidata.org/wiki/Q170050","display_name":"Chromatography","level":1,"score":0.0},{"id":"https://openalex.org/C185592680","wikidata":"https://www.wikidata.org/wiki/Q2329","display_name":"Chemistry","level":0,"score":0.0}],"mesh":[{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D012984","descriptor_name":"Software","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017386","descriptor_name":"Sequence Homology, Amino Acid","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D017434","descriptor_name":"Protein Structure, Tertiary","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false}],"locations_count":3,"locations":[{"id":"doi:10.1093/nar/gkl157","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl157","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W143/7622845/gkl157.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:16844978","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16844978","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:pubmedcentral.nih.gov:1538780","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkl157","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl157","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl157","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_2/W143/7622845/gkl157.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"public-domain","license_id":"https://openalex.org/licenses/public-domain","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[{"display_name":"Decent work and economic growth","id":"https://metadata.un.org/sdg/8","score":0.49000000953674316}],"awards":[{"id":"https://openalex.org/G2805422199","display_name":null,"funder_award_id":"Delhi","funder_id":"https://openalex.org/F4320320721","funder_display_name":"Council of Scientific and Industrial Research, India"}],"funders":[{"id":"https://openalex.org/F4320311904","display_name":"Wellcome Trust","ror":"https://ror.org/029chgv08"},{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320320715","display_name":"Tata Institute of Fundamental Research","ror":"https://ror.org/03ht1xw27"},{"id":"https://openalex.org/F4320320721","display_name":"Council of Scientific and Industrial Research, India","ror":"https://ror.org/021wm7p51"},{"id":"https://openalex.org/F4320335065","display_name":"National Centre for Biological Sciences","ror":"https://ror.org/03gf8rp76"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2154268145.pdf","grobid_xml":"https://content.openalex.org/works/W2154268145.grobid-xml"},"referenced_works_count":14,"referenced_works":["https://openalex.org/W1969995117","https://openalex.org/W2003144438","https://openalex.org/W2048102092","https://openalex.org/W2080336769","https://openalex.org/W2085277871","https://openalex.org/W2100033550","https://openalex.org/W2108067237","https://openalex.org/W2124871329","https://openalex.org/W2127716074","https://openalex.org/W2134571902","https://openalex.org/W2136430304","https://openalex.org/W2143705344","https://openalex.org/W2158714788","https://openalex.org/W4213149192"],"related_works":["https://openalex.org/W2135668486","https://openalex.org/W2106241755","https://openalex.org/W2105364679","https://openalex.org/W2062821270","https://openalex.org/W4231925401","https://openalex.org/W2117484859","https://openalex.org/W2154268145","https://openalex.org/W4311573121","https://openalex.org/W2018564950","https://openalex.org/W2342240481"],"abstract_inverted_index":{"Owing":[0],"to":[1,10,119],"high":[2],"evolutionary":[3],"divergence,":[4],"it":[5],"is":[6,99,136],"not":[7],"always":[8],"possible":[9],"identify":[11],"distantly":[12],"related":[13,35],"protein":[14,29],"domains":[15],"by":[16],"sequence":[17,23],"search":[18,114],"techniques.":[19],"Intermediate":[20],"sequences":[21],"possess":[22],"features":[24],"of":[25,33,43,66,72,89],"more":[26],"than":[27,103],"one":[28],"and":[30,91,128],"facilitate":[31],"detection":[32],"remotely":[34],"proteins.":[36,79],"We":[37,107],"have":[38],"demonstrated":[39],"recently":[40],"the":[41,70,125],"employment":[42],"Cascade":[44,121],"PSI-BLAST":[45,49,67,105,122],"where":[46],"we":[47],"perform":[48,120],"for":[50,112,133],"many":[51],"'generations',":[52],"initiating":[53],"searches":[54,123],"from":[55],"new":[56],"homologues":[57],"as":[58],"well.":[59],"Such":[60],"a":[61,86,109],"rigorous":[62],"propagation":[63],"through":[64],"generations":[65],"employs":[68],"effectively":[69],"role":[71],"intermediates":[73],"in":[74,94],"detecting":[75,95],"distant":[76],"similarities":[77],"between":[78],"This":[80],"approach":[81],"has":[82],"been":[83],"tested":[84],"on":[85],"large":[87],"number":[88],"folds":[90],"its":[92],"performance":[93],"superfamily":[96],"level":[97],"relationships":[98],"approximately":[100],"35%":[101],"better":[102],"simple":[104],"searches.":[106],"present":[108],"web":[110],"server":[111,135],"this":[113,134],"method":[115],"that":[116],"permits":[117],"users":[118],"against":[124],"Pfam,":[126],"SCOP":[127],"SwissProt":[129],"databases.":[130],"The":[131],"URL":[132],"http://crick.mbu.iisc.ernet.in/~CASCADE/CascadeBlast.html.":[137]},"counts_by_year":[{"year":2026,"cited_by_count":1},{"year":2024,"cited_by_count":1},{"year":2019,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":2},{"year":2012,"cited_by_count":1}],"updated_date":"2026-03-14T08:43:22.919905","created_date":"2025-10-10T00:00:00"}
