{"id":"https://openalex.org/W2160375677","doi":"https://doi.org/10.1093/nar/gkl1005","title":"PEDANT genome database: 10 years online","display_name":"PEDANT genome database: 10 years online","publication_year":2006,"publication_date":"2006-12-06","ids":{"openalex":"https://openalex.org/W2160375677","doi":"https://doi.org/10.1093/nar/gkl1005","mag":"2160375677","pmid":"https://pubmed.ncbi.nlm.nih.gov/17148486"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkl1005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl1005","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D354/3792808/gkl1005.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D354/3792808/gkl1005.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5103430054","display_name":"Monica Riley","orcid":null},"institutions":[],"countries":[],"is_corresponding":true,"raw_author_name":"M. L. Riley","raw_affiliation_strings":["Institute for Bioinformatics, GSF-National Research Center for Health and Environment, Ingolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany"],"affiliations":[{"raw_affiliation_string":"Institute for Bioinformatics, GSF-National Research Center for Health and Environment, Ingolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","institution_ids":[]},{"raw_affiliation_string":"1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5056647616","display_name":"Thorsten Schmidt","orcid":"https://orcid.org/0000-0002-6719-0633"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"T. Schmidt","raw_affiliation_strings":["2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany"],"affiliations":[{"raw_affiliation_string":"2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5045079135","display_name":"Irena I. Artamonova","orcid":null},"institutions":[],"countries":[],"is_corresponding":false,"raw_author_name":"I. I. Artamonova","raw_affiliation_strings":["1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany"],"affiliations":[{"raw_affiliation_string":"1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","institution_ids":[]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5062042335","display_name":"Christian Wagner","orcid":"https://orcid.org/0000-0001-7788-4594"},"institutions":[{"id":"https://openalex.org/I105862471","display_name":"Biomax Informatics (Germany)","ror":"https://ror.org/02h1y5y54","country_code":"DE","type":"company","lineage":["https://openalex.org/I105862471"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"C. Wagner","raw_affiliation_strings":["3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany"],"affiliations":[{"raw_affiliation_string":"3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany","institution_ids":["https://openalex.org/I105862471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5102899468","display_name":"Andreas V\u00f6lz","orcid":"https://orcid.org/0000-0002-8040-6400"},"institutions":[{"id":"https://openalex.org/I105862471","display_name":"Biomax Informatics (Germany)","ror":"https://ror.org/02h1y5y54","country_code":"DE","type":"company","lineage":["https://openalex.org/I105862471"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"A. Volz","raw_affiliation_strings":["3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany"],"affiliations":[{"raw_affiliation_string":"3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany","institution_ids":["https://openalex.org/I105862471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5109225292","display_name":"K. G. Heumann","orcid":null},"institutions":[{"id":"https://openalex.org/I105862471","display_name":"Biomax Informatics (Germany)","ror":"https://ror.org/02h1y5y54","country_code":"DE","type":"company","lineage":["https://openalex.org/I105862471"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"K. Heumann","raw_affiliation_strings":["3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany"],"affiliations":[{"raw_affiliation_string":"3Biomax Informatics AG, Lochhamer Strasse 982152 Martinsried, Germany","institution_ids":["https://openalex.org/I105862471"]}]},{"author_position":"middle","author":{"id":"https://openalex.org/A5086890458","display_name":"Hans\u2010Werner Mewes","orcid":"https://orcid.org/0000-0002-9713-6398"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"H.-W. Mewes","raw_affiliation_strings":["1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany"],"affiliations":[{"raw_affiliation_string":"1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","institution_ids":[]},{"raw_affiliation_string":"2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]},{"author_position":"last","author":{"id":"https://openalex.org/A5060795824","display_name":"Dmitrij Frishman","orcid":"https://orcid.org/0000-0002-9006-4707"},"institutions":[{"id":"https://openalex.org/I62916508","display_name":"Technical University of Munich","ror":"https://ror.org/02kkvpp62","country_code":"DE","type":"education","lineage":["https://openalex.org/I62916508"]}],"countries":["DE"],"is_corresponding":false,"raw_author_name":"D. Frishman","raw_affiliation_strings":["1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany"],"affiliations":[{"raw_affiliation_string":"1Institute for Bioinformatics, GSF-National Research Center for Health and EnvironmentIngolst\u00e4dter Landstrasse 1, 85764 Neuherberg, Germany","institution_ids":[]},{"raw_affiliation_string":"2Department of Genome-oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Technische Universit\u00e4t M\u00fcnchen85350 Freising, Germany","institution_ids":["https://openalex.org/I62916508"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":8,"corresponding_author_ids":["https://openalex.org/A5103430054"],"corresponding_institution_ids":[],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":8.3831,"has_fulltext":true,"cited_by_count":32,"citation_normalized_percentile":{"value":0.97482089,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":96},"biblio":{"volume":"35","issue":"Database","first_page":"D354","last_page":"D357"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},"topics":[{"id":"https://openalex.org/T11269","display_name":"Algorithms and Data Compression","score":0.9980000257492065,"subfield":{"id":"https://openalex.org/subfields/1702","display_name":"Artificial Intelligence"},"field":{"id":"https://openalex.org/fields/17","display_name":"Computer Science"},"domain":{"id":"https://openalex.org/domains/3","display_name":"Physical Sciences"}},{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9976999759674072,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T12254","display_name":"Machine Learning in Bioinformatics","score":0.993399977684021,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/annotation","display_name":"Annotation","score":0.7473299503326416},{"id":"https://openalex.org/keywords/personalization","display_name":"Personalization","score":0.6412938237190247},{"id":"https://openalex.org/keywords/java","display_name":"Java","score":0.6069335341453552},{"id":"https://openalex.org/keywords/graphical-user-interface","display_name":"Graphical user interface","score":0.5710185170173645},{"id":"https://openalex.org/keywords/web-server","display_name":"Web server","score":0.5498641729354858},{"id":"https://openalex.org/keywords/genome","display_name":"Genome","score":0.5459640622138977},{"id":"https://openalex.org/keywords/world-wide-web","display_name":"World Wide Web","score":0.4882068932056427},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.4851413667201996},{"id":"https://openalex.org/keywords/user-interface","display_name":"User interface","score":0.47847673296928406},{"id":"https://openalex.org/keywords/set","display_name":"Set (abstract data type)","score":0.4617960453033447},{"id":"https://openalex.org/keywords/web-application","display_name":"Web application","score":0.4617673456668854},{"id":"https://openalex.org/keywords/web-page","display_name":"Web page","score":0.45025599002838135},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.45022034645080566},{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.4328671991825104},{"id":"https://openalex.org/keywords/web-service","display_name":"Web service","score":0.42448073625564575},{"id":"https://openalex.org/keywords/interface","display_name":"Interface (matter)","score":0.4240267276763916},{"id":"https://openalex.org/keywords/the-internet","display_name":"The Internet","score":0.37178748846054077},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.27150875329971313},{"id":"https://openalex.org/keywords/operating-system","display_name":"Operating system","score":0.12210628390312195},{"id":"https://openalex.org/keywords/genetics","display_name":"Genetics","score":0.10529348254203796},{"id":"https://openalex.org/keywords/programming-language","display_name":"Programming language","score":0.0812332034111023},{"id":"https://openalex.org/keywords/gene","display_name":"Gene","score":0.08116865158081055}],"concepts":[{"id":"https://openalex.org/C2776321320","wikidata":"https://www.wikidata.org/wiki/Q857525","display_name":"Annotation","level":2,"score":0.7473299503326416},{"id":"https://openalex.org/C183003079","wikidata":"https://www.wikidata.org/wiki/Q1000371","display_name":"Personalization","level":2,"score":0.6412938237190247},{"id":"https://openalex.org/C548217200","wikidata":"https://www.wikidata.org/wiki/Q251","display_name":"Java","level":2,"score":0.6069335341453552},{"id":"https://openalex.org/C37789001","wikidata":"https://www.wikidata.org/wiki/Q782543","display_name":"Graphical user interface","level":2,"score":0.5710185170173645},{"id":"https://openalex.org/C11392498","wikidata":"https://www.wikidata.org/wiki/Q11288","display_name":"Web server","level":3,"score":0.5498641729354858},{"id":"https://openalex.org/C141231307","wikidata":"https://www.wikidata.org/wiki/Q7020","display_name":"Genome","level":3,"score":0.5459640622138977},{"id":"https://openalex.org/C136764020","wikidata":"https://www.wikidata.org/wiki/Q466","display_name":"World Wide Web","level":1,"score":0.4882068932056427},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.4851413667201996},{"id":"https://openalex.org/C89505385","wikidata":"https://www.wikidata.org/wiki/Q47146","display_name":"User interface","level":2,"score":0.47847673296928406},{"id":"https://openalex.org/C177264268","wikidata":"https://www.wikidata.org/wiki/Q1514741","display_name":"Set (abstract data type)","level":2,"score":0.4617960453033447},{"id":"https://openalex.org/C118643609","wikidata":"https://www.wikidata.org/wiki/Q189210","display_name":"Web application","level":2,"score":0.4617673456668854},{"id":"https://openalex.org/C21959979","wikidata":"https://www.wikidata.org/wiki/Q36774","display_name":"Web page","level":2,"score":0.45025599002838135},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.45022034645080566},{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.4328671991825104},{"id":"https://openalex.org/C35578498","wikidata":"https://www.wikidata.org/wiki/Q193424","display_name":"Web service","level":2,"score":0.42448073625564575},{"id":"https://openalex.org/C113843644","wikidata":"https://www.wikidata.org/wiki/Q901882","display_name":"Interface (matter)","level":4,"score":0.4240267276763916},{"id":"https://openalex.org/C110875604","wikidata":"https://www.wikidata.org/wiki/Q75","display_name":"The Internet","level":2,"score":0.37178748846054077},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.27150875329971313},{"id":"https://openalex.org/C111919701","wikidata":"https://www.wikidata.org/wiki/Q9135","display_name":"Operating system","level":1,"score":0.12210628390312195},{"id":"https://openalex.org/C54355233","wikidata":"https://www.wikidata.org/wiki/Q7162","display_name":"Genetics","level":1,"score":0.10529348254203796},{"id":"https://openalex.org/C199360897","wikidata":"https://www.wikidata.org/wiki/Q9143","display_name":"Programming language","level":1,"score":0.0812332034111023},{"id":"https://openalex.org/C104317684","wikidata":"https://www.wikidata.org/wiki/Q7187","display_name":"Gene","level":2,"score":0.08116865158081055},{"id":"https://openalex.org/C157915830","wikidata":"https://www.wikidata.org/wiki/Q2928001","display_name":"Bubble","level":2,"score":0.0},{"id":"https://openalex.org/C129307140","wikidata":"https://www.wikidata.org/wiki/Q6795880","display_name":"Maximum bubble pressure method","level":3,"score":0.0}],"mesh":[{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D003196","descriptor_name":"Computer Graphics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D011506","descriptor_name":"Proteins","qualifier_ui":"Q000235","qualifier_name":"genetics","is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D014584","descriptor_name":"User-Computer Interface","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D020539","descriptor_name":"Sequence Analysis, Protein","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D023281","descriptor_name":"Genomics","qualifier_ui":null,"qualifier_name":null,"is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000592","qualifier_name":"standards","is_major_topic":true}],"locations_count":11,"locations":[{"id":"doi:10.1093/nar/gkl1005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl1005","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D354/3792808/gkl1005.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:17148486","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/17148486","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.103.3217","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.103.3217","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/cgi/reprint/35/suppl_1/D354.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.280.2248","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.280.2248","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"ftp://ftp.ncbi.nlm.nih.gov/pub/pmc/0c/d2/Nucleic_Acids_Res_2007_Jan_5_35(Database_issue)_D354-D357.tar.gz","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.329.2259","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.329.2259","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/35/suppl_1/D354.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.579.9774","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.579.9774","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2006/12/05/nar.gkl1005.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.622.8856","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.622.8856","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/early/2006/12/05/nar.gkl1005.full.pdf","raw_type":"text"},{"id":"pmh:oai:CiteSeerX.psu:10.1.1.623.9498","is_oa":false,"landing_page_url":"http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.623.9498","pdf_url":null,"source":null,"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"http://nar.oxfordjournals.org/content/35/suppl_1/D354.full-text-lowres.pdf","raw_type":"text"},{"id":"pmh:oai:europepmc.org:2284875","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1761421","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":null,"raw_type":"Text"},{"id":"pmh:oai:opus-zb.helmholtz-muenchen.de:5818","is_oa":true,"landing_page_url":"https://push-zb.helmholtz-muenchen.de/frontdoor.php?source_opus=5818","pdf_url":null,"source":{"id":"https://openalex.org/S4377196115","display_name":"Site cant be reached","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":null,"host_organization_name":null,"host_organization_lineage":[],"host_organization_lineage_names":[],"type":"repository"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res. 35, D354-D357 (2007)","raw_type":"article"},{"id":"pmh:oai:pubmedcentral.nih.gov:1761421","is_oa":true,"landing_page_url":"http://doi.org/10.1093/nar/gkl1005","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkl1005","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkl1005","pdf_url":"https://academic.oup.com/nar/article-pdf/35/suppl_1/D354/3792808/gkl1005.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"cc-by-nc","license_id":"https://openalex.org/licenses/cc-by-nc","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2160375677.pdf","grobid_xml":"https://content.openalex.org/works/W2160375677.grobid-xml"},"referenced_works_count":12,"referenced_works":["https://openalex.org/W1484413656","https://openalex.org/W1493209013","https://openalex.org/W1509280691","https://openalex.org/W1985589565","https://openalex.org/W2081730254","https://openalex.org/W2091560728","https://openalex.org/W2106957945","https://openalex.org/W2117942296","https://openalex.org/W2140897574","https://openalex.org/W2141148930","https://openalex.org/W2161062388","https://openalex.org/W4211083314"],"related_works":["https://openalex.org/W3180179400","https://openalex.org/W2154998455","https://openalex.org/W2118366689","https://openalex.org/W2376164011","https://openalex.org/W1594341569","https://openalex.org/W2116888309","https://openalex.org/W2281900275","https://openalex.org/W2268684599","https://openalex.org/W2477652530","https://openalex.org/W1511683926"],"abstract_inverted_index":{"The":[0,26,53],"PEDANT":[1,23,76,96],"genome":[2,43],"database":[3],"provides":[4],"exhaustive":[5],"annotation":[6,94],"of":[7,14,21,41,75,85,92],"468":[8],"genomes":[9],"by":[10],"a":[11],"broad":[12],"set":[13],"bioinformatics":[15],"algorithms.":[16],"We":[17,65],"describe":[18],"recent":[19],"developments":[20],"the":[22,42,72,83],"Web":[24,68],"server.":[25],"all-new":[27],"Graphical":[28],"User":[29],"Interface":[30],"(GUI)":[31],"implemented":[32],"in":[33],"Javatrade":[34],"mark":[35],"allows":[36],"for":[37,89],"more":[38],"efficient":[39],"navigation":[40],"data,":[44],"extended":[45],"search":[46],"capabilities,":[47],"user":[48],"customization":[49],"and":[50,55,63],"export":[51],"facilities.":[52],"DNA":[54],"Protein":[56],"viewers":[57],"have":[58],"been":[59],"made":[60],"highly":[61],"dynamic":[62],"customizable.":[64],"also":[66],"provide":[67],"Services":[69],"to":[70,100],"access":[71],"entire":[73],"body":[74],"data":[77],"programmatically.":[78],"Finally,":[79],"we":[80],"report":[81],"on":[82],"application":[84],"association":[86],"rule":[87],"mining":[88],"automatic":[90],"detection":[91],"potential":[93],"errors.":[95],"is":[97],"freely":[98],"accessible":[99],"academic":[101],"users":[102],"at":[103],"http://pedant.gsf.de.":[104]},"counts_by_year":[{"year":2024,"cited_by_count":2},{"year":2022,"cited_by_count":1},{"year":2021,"cited_by_count":1},{"year":2018,"cited_by_count":1},{"year":2016,"cited_by_count":1},{"year":2015,"cited_by_count":1},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2}],"updated_date":"2026-04-05T17:49:38.594831","created_date":"2025-10-10T00:00:00"}
