{"id":"https://openalex.org/W2917064891","doi":"https://doi.org/10.1093/nar/gkj162","title":"The Molecular Biology Database Collection: 2006 update","display_name":"The Molecular Biology Database Collection: 2006 update","publication_year":2005,"publication_date":"2005-12-28","ids":{"openalex":"https://openalex.org/W2917064891","doi":"https://doi.org/10.1093/nar/gkj162","mag":"2917064891","pmid":"https://pubmed.ncbi.nlm.nih.gov/16381871"},"language":"en","primary_location":{"id":"doi:10.1093/nar/gkj162","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj162","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D3/3926631/gkj162.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"type":"article","indexed_in":["crossref","doaj","pubmed"],"open_access":{"is_oa":true,"oa_status":"gold","oa_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D3/3926631/gkj162.pdf","any_repository_has_fulltext":true},"authorships":[{"author_position":"first","author":{"id":"https://openalex.org/A5077552473","display_name":"Michael Y. Galperin","orcid":"https://orcid.org/0000-0002-2265-5572"},"institutions":[{"id":"https://openalex.org/I4210109390","display_name":"National Center for Biotechnology Information","ror":"https://ror.org/02meqm098","country_code":"US","type":"facility","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238","https://openalex.org/I2800548410","https://openalex.org/I4210109390"]},{"id":"https://openalex.org/I1299303238","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88","country_code":"US","type":"government","lineage":["https://openalex.org/I1299022934","https://openalex.org/I1299303238"]}],"countries":["US"],"is_corresponding":true,"raw_author_name":"M. Y. Galperin","raw_affiliation_strings":["National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA. galperin@ncbi.nlm.nih.gov","National Center for Biotechnology Information, National Library of Medicine National Institutes of Health  Bethesda, MD 20894, USA"],"affiliations":[{"raw_affiliation_string":"National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD 20894, USA. galperin@ncbi.nlm.nih.gov","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]},{"raw_affiliation_string":"National Center for Biotechnology Information, National Library of Medicine National Institutes of Health  Bethesda, MD 20894, USA","institution_ids":["https://openalex.org/I4210109390","https://openalex.org/I1299303238"]}]}],"institutions":[],"countries_distinct_count":1,"institutions_distinct_count":1,"corresponding_author_ids":["https://openalex.org/A5077552473"],"corresponding_institution_ids":["https://openalex.org/I1299303238","https://openalex.org/I4210109390"],"apc_list":{"value":3630,"currency":"USD","value_usd":3630},"apc_paid":{"value":3630,"currency":"USD","value_usd":3630},"fwci":10.3177,"has_fulltext":true,"cited_by_count":101,"citation_normalized_percentile":{"value":0.98984902,"is_in_top_1_percent":false,"is_in_top_10_percent":true},"cited_by_percentile_year":{"min":89,"max":97},"biblio":{"volume":"34","issue":"90001","first_page":"D3","last_page":"D5"},"is_retracted":false,"is_paratext":false,"is_xpac":false,"primary_topic":{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},"topics":[{"id":"https://openalex.org/T10015","display_name":"Genomics and Phylogenetic Studies","score":0.9994000196456909,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T10521","display_name":"RNA and protein synthesis mechanisms","score":0.9988999962806702,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}},{"id":"https://openalex.org/T13937","display_name":"Genetics, Bioinformatics, and Biomedical Research","score":0.9962999820709229,"subfield":{"id":"https://openalex.org/subfields/1312","display_name":"Molecular Biology"},"field":{"id":"https://openalex.org/fields/13","display_name":"Biochemistry, Genetics and Molecular Biology"},"domain":{"id":"https://openalex.org/domains/1","display_name":"Life Sciences"}}],"keywords":[{"id":"https://openalex.org/keywords/database","display_name":"Database","score":0.7579268217086792},{"id":"https://openalex.org/keywords/biology","display_name":"Biology","score":0.6877948641777039},{"id":"https://openalex.org/keywords/online-database","display_name":"Online database","score":0.5270184278488159},{"id":"https://openalex.org/keywords/biological-database","display_name":"Biological database","score":0.4366307258605957},{"id":"https://openalex.org/keywords/resource","display_name":"Resource (disambiguation)","score":0.41693252325057983},{"id":"https://openalex.org/keywords/bioinformatics","display_name":"Bioinformatics","score":0.2543671727180481},{"id":"https://openalex.org/keywords/computer-science","display_name":"Computer science","score":0.24082306027412415}],"concepts":[{"id":"https://openalex.org/C77088390","wikidata":"https://www.wikidata.org/wiki/Q8513","display_name":"Database","level":1,"score":0.7579268217086792},{"id":"https://openalex.org/C86803240","wikidata":"https://www.wikidata.org/wiki/Q420","display_name":"Biology","level":0,"score":0.6877948641777039},{"id":"https://openalex.org/C2777715827","wikidata":"https://www.wikidata.org/wiki/Q7094076","display_name":"Online database","level":2,"score":0.5270184278488159},{"id":"https://openalex.org/C20901353","wikidata":"https://www.wikidata.org/wiki/Q4117139","display_name":"Biological database","level":2,"score":0.4366307258605957},{"id":"https://openalex.org/C206345919","wikidata":"https://www.wikidata.org/wiki/Q20380951","display_name":"Resource (disambiguation)","level":2,"score":0.41693252325057983},{"id":"https://openalex.org/C60644358","wikidata":"https://www.wikidata.org/wiki/Q128570","display_name":"Bioinformatics","level":1,"score":0.2543671727180481},{"id":"https://openalex.org/C41008148","wikidata":"https://www.wikidata.org/wiki/Q21198","display_name":"Computer science","level":0,"score":0.24082306027412415},{"id":"https://openalex.org/C31258907","wikidata":"https://www.wikidata.org/wiki/Q1301371","display_name":"Computer network","level":1,"score":0.0}],"mesh":[{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D008967","descriptor_name":"Molecular Biology","qualifier_ui":"Q000639","qualifier_name":"trends","is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D020407","descriptor_name":"Internet","qualifier_ui":null,"qualifier_name":null,"is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false},{"descriptor_ui":"D030541","descriptor_name":"Databases, Genetic","qualifier_ui":"Q000706","qualifier_name":"statistics & numerical data","is_major_topic":false}],"locations_count":4,"locations":[{"id":"doi:10.1093/nar/gkj162","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj162","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D3/3926631/gkj162.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},{"id":"pmid:16381871","is_oa":false,"landing_page_url":"https://pubmed.ncbi.nlm.nih.gov/16381871","pdf_url":null,"source":{"id":"https://openalex.org/S4306525036","display_name":"PubMed","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic acids research","raw_type":null},{"id":"pmh:oai:europepmc.org:156943","is_oa":false,"landing_page_url":"http://europepmc.org/pmc/articles/PMC1347524","pdf_url":null,"source":{"id":"https://openalex.org/S4306400806","display_name":"Europe PMC (PubMed Central)","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1303153112","host_organization_name":"European Bioinformatics Institute","host_organization_lineage":["https://openalex.org/I1303153112"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"","raw_type":"Text"},{"id":"pmh:oai:pubmedcentral.nih.gov:1347524","is_oa":true,"landing_page_url":"https://www.ncbi.nlm.nih.gov/pmc/articles/1347524","pdf_url":null,"source":{"id":"https://openalex.org/S2764455111","display_name":"PubMed Central","issn_l":null,"issn":null,"is_oa":false,"is_in_doaj":false,"is_core":false,"host_organization":"https://openalex.org/I1299303238","host_organization_name":"National Institutes of Health","host_organization_lineage":["https://openalex.org/I1299303238"],"host_organization_lineage_names":[],"type":"repository"},"license":null,"license_id":null,"version":"submittedVersion","is_accepted":false,"is_published":false,"raw_source_name":"Nucleic Acids Res","raw_type":"Text"}],"best_oa_location":{"id":"doi:10.1093/nar/gkj162","is_oa":true,"landing_page_url":"https://doi.org/10.1093/nar/gkj162","pdf_url":"https://academic.oup.com/nar/article-pdf/34/suppl_1/D3/3926631/gkj162.pdf","source":{"id":"https://openalex.org/S134668137","display_name":"Nucleic Acids Research","issn_l":"0305-1048","issn":["0305-1048","1362-4954","1362-4962"],"is_oa":true,"is_in_doaj":true,"is_core":true,"host_organization":"https://openalex.org/P4310311648","host_organization_name":"Oxford University Press","host_organization_lineage":["https://openalex.org/P4310311648","https://openalex.org/P4310311647"],"host_organization_lineage_names":["Oxford University Press","University of Oxford"],"type":"journal"},"license":"other-oa","license_id":"https://openalex.org/licenses/other-oa","version":"publishedVersion","is_accepted":true,"is_published":true,"raw_source_name":"Nucleic Acids Research","raw_type":"journal-article"},"sustainable_development_goals":[],"awards":[],"funders":[{"id":"https://openalex.org/F4320320290","display_name":"University of Oxford","ror":"https://ror.org/052gg0110"},{"id":"https://openalex.org/F4320332161","display_name":"National Institutes of Health","ror":"https://ror.org/01cwqze88"},{"id":"https://openalex.org/F4320337372","display_name":"U.S. National Library of Medicine","ror":"https://ror.org/0060t0j89"}],"has_content":{"pdf":true,"grobid_xml":true},"content_urls":{"pdf":"https://content.openalex.org/works/W2917064891.pdf","grobid_xml":"https://content.openalex.org/works/W2917064891.grobid-xml"},"referenced_works_count":20,"referenced_works":["https://openalex.org/W1527927437","https://openalex.org/W1984865036","https://openalex.org/W1990987722","https://openalex.org/W2025476381","https://openalex.org/W2036726333","https://openalex.org/W2052097062","https://openalex.org/W2119464316","https://openalex.org/W2120827716","https://openalex.org/W2125203512","https://openalex.org/W2126676741","https://openalex.org/W2133034723","https://openalex.org/W2140455347","https://openalex.org/W2141885858","https://openalex.org/W2142237411","https://openalex.org/W2150640337","https://openalex.org/W2154139219","https://openalex.org/W2916858871","https://openalex.org/W3095583226","https://openalex.org/W3140730010","https://openalex.org/W4210400672"],"related_works":["https://openalex.org/W2033835987","https://openalex.org/W4248750016","https://openalex.org/W4205092877","https://openalex.org/W4243839507","https://openalex.org/W1824784554","https://openalex.org/W2048912770","https://openalex.org/W1764002470","https://openalex.org/W2113503643","https://openalex.org/W2123887743","https://openalex.org/W1503231262"],"abstract_inverted_index":{"The":[0,61,73,118],"NAR":[1],"Molecular":[2],"Biology":[3],"Database":[4],"Collection":[5],"is":[6,88],"a":[7,90,103],"public":[8,52],"online":[9,126],"resource":[10],"that":[11,31,46,94],"contains":[12],"links":[13],"to":[14,50,57,102],"all":[15],"databases":[16,30,45,74],"described":[17],"in":[18,35],"this":[19,27],"issue":[20],"of":[21,38,80],"Nucleic":[22,129],"Acids":[23,130],"Research.":[24],"In":[25],"addition,":[26],"collection":[28],"lists":[29],"have":[32,82],"been":[33,83],"featured":[34],"previous":[36,71],"issues":[37],"NAR,":[39],"as":[40,42],"well":[41],"selected":[43],"other":[44],"are":[47,116,124],"freely":[48],"available":[49,125],"the":[51,58,70,99,112,128],"and":[53,106,122],"may":[54],"be":[55],"useful":[56],"molecular":[59],"biologist.":[60],"2006":[62],"update":[63],"includes":[64],"858":[65],"databases,":[66],"139":[67],"more":[68],"than":[69],"one.":[72],"come":[75],"with":[76],"brief":[77],"summaries,":[78],"many":[79],"which":[81],"updated":[84],"recently.":[85],"Each":[86],"database":[87,100,120],"assigned":[89],"stable":[91],"accession":[92],"number":[93],"does":[95],"not":[96],"change":[97],"if":[98],"moves":[101],"new":[104],"location":[105],"its":[107],"URL,":[108],"authors'":[109],"names":[110],"or":[111],"contact":[113],"person":[114],"address":[115],"updated.":[117],"complete":[119],"list":[121],"summaries":[123],"at":[127],"Research":[131],"website":[132],"http://nar.oxfordjournals.org/.":[133]},"counts_by_year":[{"year":2023,"cited_by_count":1},{"year":2018,"cited_by_count":2},{"year":2016,"cited_by_count":3},{"year":2014,"cited_by_count":1},{"year":2013,"cited_by_count":2},{"year":2012,"cited_by_count":3}],"updated_date":"2026-03-10T16:38:18.471706","created_date":"2025-10-10T00:00:00"}
